pre-miRNA Information
pre-miRNA hsa-mir-4747   
Genomic Coordinates chr19: 4932687 - 4932740
Description Homo sapiens miR-4747 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4747-5p
Sequence 1| AGGGAAGGAGGCUUGGUCUUAG |22
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs560927363 4 dbSNP
rs1471226927 10 dbSNP
rs763137545 12 dbSNP
rs767337154 15 dbSNP
rs775298039 16 dbSNP
rs760472311 19 dbSNP
rs1207950315 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CYSLTR2   
Synonyms CYSLT2, CYSLT2R, GPCR21, HG57, HPN321, KPG_011, PSEC0146, hGPCR21
Description cysteinyl leukotriene receptor 2
Transcript NM_020377   
Expression
Putative miRNA Targets on CYSLTR2
3'UTR of CYSLTR2
(miRNA target sites are highlighted)
>CYSLTR2|NM_020377|3'UTR
   1 GGAGCTCTTAGATGAGACCTGTTCTTGTATCCTTGTGTCCATCTTCATTCACTCATAGTCTCCAAATGACTTTGTATTTA
  81 CATCACTCCCAACAAATGTTGATTCTTAATATTTAGTTGACCATTACTTTTGTTAATAAGACCTACTTCAAAAATTTTAT
 161 TCAGTGTATTTTCAGTTGTTGAGTCTTAATGAGGGATACAGGAGGAAAAATCCCTACTAGAGTCCTGTGGGCTGAAATAT
 241 CAGACTGGGAAAAAATGCAAAGCACATTGGATCCTACTTTTCTTCAGATATTGAACCAGATCTCTGGCCCATCAGGCTTT
 321 CTAAATTCTTCAAAAGAGCCACAACTTCCCCAGCTTCTCCAGCTCCCCTGTCCTCTTCAATCCCTTGAGATATAGCCAAC
 401 TAACGACGCTACTGGAAGCCCCAGAGCAGAAAAGAAGCACATCCTAAGATTCAGGGAAAGACTAACTGTGAAAAGGAAGG
 481 CTGTCCTATAACAAAGCAGCATCAAGTCCCAAGTAAGGACAGTGAGAGAAAAGGGGGAGAAGGATTGGAGCAAAAGAGAA
 561 CTGGCAATAAGTAGGGGAAGGAAGAATTTCATTTTGCATTGGGAGAGAGGTTCTAACACACTGAAGGCAACCCTATTTCT
 641 ACTGTTTCTCTCTTGCCAGGGTATTAGGAAGGACAGGAAAAGTAGGAGGAGGATCTGGGGCATTGCCCTAGGAAATGAAA
 721 GAATTGTGTATAGAATGGAAGGGGGATCATCAAGGACATGTATCTCAAATTTTCTTTGAGATGCAGGTTAGTTGACCTTG
 801 CTGCAGTTCTCCTTCCCATTAATTCATTGGGATGGAAGCCAAAAATAAAAGAGGTGCCTCTGAGGATTAGGGTTGAGCAC
 881 TCAAGGGAAAGATGGAGTAGAGGGCAAATAGCAAAAGTTGTTGCACTCCTGAAATTCTATTAACATTTCCGCAGAAGATG
 961 AGTAGGGAGATGCTGCCTTCCCTTTTGAGATAGTGTAGAAAAACACTAGATAGTGTGAGAGGTTCCTTTCTGTCCACTGA
1041 AACAAGGCTAAGGATACTACCAACTACTATCACCATGACCATTGTACTGACAACAATTGAATGCAGTCTCCCTGCAGGGC
1121 AGATTATGCCAGGCACTTTACATTTGTTGATCCCATTTGACATTCACACCAAAGCTCTGAGTTCCATTTTACAGCTGAAG
1201 AAATTGAAGCTTAGAGAAATTAAGAAGCTTGTTTAAGTTTACACAGCTAGTAAGAGTTTTAAAAATCTCTGTGCAGAAGT
1281 GTTGGCTGGGTGCTCTCCCCACCACTACCCTTGTAAACTTCCAGGAAGATTGGTTGAAAGTCTGAATAAAAGCTGTCCTT
1361 TCCTACCAATTTCCTCCCCCTCCTCACTCTCACAAGAAAACCAAAAGTTTCTCTTCAGAGTTGTTGACTCATAGTACAGT
1441 AAAGGGTGGAGGTGATATGGCATTCTGAAAGTAGGGAGGGACTAAGTCAGTCATCATACTAAACAAAAATCCCAGTACCC
1521 TTTCCTTATTTAGCTACCAGAATGATGACAGACAGACTCAAACCCTGTCAAGACAGGACCCTGGAGGATCCTCCTATGGG
1601 GAAACTGCATAATCTGAAAAAAAGGCTGACAGATACAAATAGTTGAGGATCCTTCAACACAAAAGCTGCGTGTCTGCCCT
1681 ATTACTCACCTGACGATGAAGCCCACAATGCAACAAATCCCTTCCACTCACAGCATTTGGTCAACCTGTCAGAGCCTCAT
1761 TCTTAATTATGAAAAGTAGTCAATGAACACAATACATTTGAGGGAAAGGCCGTAACATGAAAGGCACCAACAAATAAATG
1841 TGAGAGTAGATAGAGACCTTTTGAGTATAAAAGATCCTCCAAAATAAGAGATTAAACCAAGATAGAGGAAAACACAGTAG
1921 CTGGGAAACAAGGAATCCAACGCAGGAGAAAGTGAAGAGAATTCCCAGGATGTTGGTGTGTAGCAGGCTTAGAAAGCAAG
2001 TCATTCATGTTGGAGCAGGACTCTTAAAGGACTCTAGGAGAGATGTCTCCCAGAAAAAGAAGAAATTAATTGATTCATAC
2081 ACATTGAGAGGGATTTAGATTTCTCTTGCAGAGATTGAGATAAACTAGTCGTAAATACATAGAAAAATAAGCAAGTAAAA
2161 ACGCAATACAGTTTTTAAGTGCTAGAGGAAAAGAAACTTTTGTATTAGAGAGGAAATATAACCACAGTACACTACATGGC
2241 TCAGCTGTGAATAATATTTACATAGAGGATAATGTGAATATAATAGTCTCCCATTATCTGTGGTTTTGCTTTCTGCAGTT
2321 CAGTTACAGCCAGCCAGTCTGAAAATATTAAATGGAAAATTCCAGAAATAATTCTTAAGTTTTAAAACATGTGCTGTTTT
2401 GAGTAGCATGTTGAAATCTCGCACTATCACCCTCCACCCATGTTCTGGGCAGGGCAAAGTGGGATGGTGTGAGATTTCTC
2481 CAGTGGATCCACAATGTATATGCTACCCACCCATGAGTCACTTAGTCATCATCCAGTTGCTCAGATCAACTGTTGTGGTA
2561 TAACAGTGCTTGTGTTAAAGTCACTCTTATTTTACTTACTAATGTCCCCAAAGCATAAGAGTAGTGATGCTGGCAAATAA
2641 GATACACCAAAGAGAAGCTGTAAAGTGCTTCCTCTAACAGAAAATGTGAAAGTTCTTGACTTAATAAGGAAAGAAAAAAA
2721 ACACATGCTGAAGTTGCTAAGATCTACAGTAAGAACAAATCCATCTGTAAAATTGTGAAGAAGGCAAAAGAAATTTGTGC
2801 TAGTTTTGCTGTTGCACCACAAGCTGCAAAAATTATTTATTACACCCCACGGTGTGTGATAAACACTTAGTTAAGATGAA
2881 AAGGTATTAAATTTGTGGGTGGAAGACATGAACAGAAATGTGTTCCAATTGACAGCAATCGGGTTTGGTACTATTTGGGT
2961 TTGGTGCTATTCGTATTCAGGGTCTTGGAATGCAACTCCCACAGATAAGGGGGTGCTGCTGGAGTGAAATACTGTGATAT
3041 AACCTTTTTTTCAGGAAATGAAGGGAGAAGATGTGTACGTGTGTGGGAGAGGTATAAGAGACCTAGGTTGCCATATTCTA
3121 TCACAGAAAATGCATAATAACTAAATCTGGAAAATGATGAATAGCTGTACAACCATATTATTTAGCAATAGGAGGTAAAT
3201 ACAGGTAGAAGCAGAAGAAAGAATGGGCAGGGGTTACCTCTATGGAGAAGCTGGGGTGGGAGGATAGGGTGGGGACTTAT
3281 TTTACGAACTGTGTAATTGCCTAACTTGTGAATATGTATTTCTGAAGTAAAATAAAAATTAAGTTAAAATTAAATTTTAA
3361 AATTCAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gauucugGUUCGGAGGAAGGGa 5'
                 ||: :||||||||| 
Target 5' cttgctgCAGTTCTCCTTCCCa 3'
797 - 818 159.00 -20.10
2
miRNA  3' gaUUCUGGUUCGGAGGAAGGGa 5'
            |:|:  | ||: ||||||| 
Target 5' gtAGGGAGATGCTGCCTTCCCt 3'
962 - 983 156.00 -21.10
3
miRNA  3' gaUUCUGGUUCGG-AGGAAGGGa 5'
            || |  ||||: |||||:|| 
Target 5' tgAATA-AAAGCTGTCCTTTCCt 3'
1343 - 1364 143.00 -16.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30113835 2 COSMIC
COSN30493940 3 COSMIC
COSN28757884 12 COSMIC
COSN30187497 19 COSMIC
COSN30187512 20 COSMIC
COSN15623785 33 COSMIC
COSN21894752 55 COSMIC
COSN30120549 61 COSMIC
COSN1159098 77 COSMIC
COSN31960908 154 COSMIC
COSN15623786 194 COSMIC
COSN15623787 213 COSMIC
COSN7403485 231 COSMIC
COSN30106239 244 COSMIC
COSN25121742 256 COSMIC
COSN22445141 286 COSMIC
COSN31535113 303 COSMIC
COSN22186624 346 COSMIC
COSN30126035 405 COSMIC
COSN8130317 406 COSMIC
COSN15623788 453 COSMIC
COSN30119834 485 COSMIC
COSN8587645 499 COSMIC
COSN15623789 544 COSMIC
COSN26637711 544 COSMIC
COSN30533087 551 COSMIC
COSN15623790 557 COSMIC
COSN30142197 572 COSMIC
COSN15623791 603 COSMIC
COSN30113210 610 COSMIC
COSN29448200 634 COSMIC
COSN15750573 708 COSMIC
COSN30165484 718 COSMIC
COSN30112330 722 COSMIC
COSN30544966 769 COSMIC
COSN31571871 772 COSMIC
COSN30117447 853 COSMIC
COSN31533674 886 COSMIC
COSN30127580 892 COSMIC
COSN31543815 951 COSMIC
COSN30142622 990 COSMIC
COSN29794162 1037 COSMIC
COSN28651600 1038 COSMIC
COSN26782686 1054 COSMIC
COSN24199369 1130 COSMIC
COSN31547280 1145 COSMIC
COSN15623792 1185 COSMIC
COSN15623793 1217 COSMIC
COSN31493179 1264 COSMIC
COSN15623794 1322 COSMIC
COSN30116767 1359 COSMIC
COSN30534262 1366 COSMIC
COSN26547728 1397 COSMIC
COSN30111983 1412 COSMIC
COSN30131851 1416 COSMIC
COSN31483095 1477 COSMIC
COSN15623795 1481 COSMIC
COSN31489573 1489 COSMIC
COSN19661529 1494 COSMIC
COSN7403486 1804 COSMIC
COSN4706132 1921 COSMIC
COSN7403487 2164 COSMIC
COSN21767871 2211 COSMIC
COSN1159099 2243 COSMIC
COSN4706133 2445 COSMIC
COSN9086044 2601 COSMIC
COSN15695373 2768 COSMIC
COSN32141710 2781 COSMIC
COSN25481913 2852 COSMIC
COSN6230627 2889 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs760673757 4 dbSNP
rs1316044104 5 dbSNP
rs1306418854 7 dbSNP
rs1026764729 10 dbSNP
rs1457381212 12 dbSNP
rs775046302 15 dbSNP
rs776560888 19 dbSNP
rs1483645185 20 dbSNP
rs952063009 21 dbSNP
rs760151586 31 dbSNP
rs181979553 32 dbSNP
rs200791352 33 dbSNP
rs753159172 35 dbSNP
rs201318423 36 dbSNP
rs763358498 41 dbSNP
rs953003605 43 dbSNP
rs199895994 44 dbSNP
rs144753565 50 dbSNP
rs770693838 51 dbSNP
rs756735326 53 dbSNP
rs1179698086 54 dbSNP
rs202122461 55 dbSNP
rs935507768 57 dbSNP
rs199911774 60 dbSNP
rs988322626 61 dbSNP
rs915510863 75 dbSNP
rs1217860772 77 dbSNP
rs750206194 83 dbSNP
rs200985299 84 dbSNP
rs1052172256 87 dbSNP
rs1258609123 88 dbSNP
rs1045683879 89 dbSNP
rs1214448274 94 dbSNP
rs1312272917 98 dbSNP
rs1274359020 99 dbSNP
rs202130898 100 dbSNP
rs892143665 102 dbSNP
rs1302863686 110 dbSNP
rs1206647340 118 dbSNP
rs1344855571 121 dbSNP
rs200458720 124 dbSNP
rs1401647373 134 dbSNP
rs1362635705 144 dbSNP
rs201470543 160 dbSNP
rs1044376864 165 dbSNP
rs1453061116 169 dbSNP
rs1490082869 179 dbSNP
rs1199701621 183 dbSNP
rs1178396358 186 dbSNP
rs201965961 190 dbSNP
rs1479725346 195 dbSNP
rs1268839242 197 dbSNP
rs200345276 200 dbSNP
rs1194782170 202 dbSNP
rs148112281 203 dbSNP
rs566145899 205 dbSNP
rs199769985 213 dbSNP
rs1185757338 217 dbSNP
rs1204184975 217 dbSNP
rs200758759 218 dbSNP
rs1005158336 220 dbSNP
rs1411647120 258 dbSNP
rs1257225101 261 dbSNP
rs201149875 267 dbSNP
rs35166511 269 dbSNP
rs994014872 278 dbSNP
rs1014768070 284 dbSNP
rs1278787750 289 dbSNP
rs3803187 293 dbSNP
rs200582990 294 dbSNP
rs1365045261 296 dbSNP
rs952156925 297 dbSNP
rs201596503 309 dbSNP
rs199861774 311 dbSNP
rs994786549 317 dbSNP
rs1304620126 336 dbSNP
rs1468321370 342 dbSNP
rs200682249 343 dbSNP
rs1172020522 369 dbSNP
rs1479128249 374 dbSNP
rs202009882 375 dbSNP
rs576671573 381 dbSNP
rs984775529 382 dbSNP
rs1271185010 384 dbSNP
rs1192984495 386 dbSNP
rs544080937 392 dbSNP
rs1257868082 396 dbSNP
rs200190923 405 dbSNP
rs559214699 406 dbSNP
rs200909472 408 dbSNP
rs201945844 409 dbSNP
rs199942259 410 dbSNP
rs1018743726 415 dbSNP
rs201094110 421 dbSNP
rs1358121742 423 dbSNP
rs202160510 426 dbSNP
rs1245284542 430 dbSNP
rs200323726 438 dbSNP
rs1317448865 441 dbSNP
rs1291542103 444 dbSNP
rs201447218 465 dbSNP
rs202223515 475 dbSNP
rs1214792736 484 dbSNP
rs927805435 487 dbSNP
rs142983773 489 dbSNP
rs201222281 491 dbSNP
rs988308379 493 dbSNP
rs946850976 495 dbSNP
rs913616189 501 dbSNP
rs1473340762 509 dbSNP
rs1369777328 516 dbSNP
rs1181372128 518 dbSNP
rs1443701983 519 dbSNP
rs199542344 521 dbSNP
rs200540365 524 dbSNP
rs926864598 525 dbSNP
rs1181695449 536 dbSNP
rs1435975222 538 dbSNP
rs201191045 542 dbSNP
rs1210157219 546 dbSNP
rs199764072 548 dbSNP
rs1358209151 552 dbSNP
rs549008619 558 dbSNP
rs1384638117 568 dbSNP
rs939395542 570 dbSNP
rs753173142 590 dbSNP
rs1402451775 596 dbSNP
rs1445353761 599 dbSNP
rs186330884 600 dbSNP
rs908516033 601 dbSNP
rs1334451763 603 dbSNP
rs201719557 604 dbSNP
rs1406247156 606 dbSNP
rs1367842549 608 dbSNP
rs1038840406 613 dbSNP
rs778152966 622 dbSNP
rs114907091 623 dbSNP
rs1319385145 624 dbSNP
rs995067833 628 dbSNP
rs993653023 629 dbSNP
rs1232168357 630 dbSNP
rs1451019489 631 dbSNP
rs1199487903 632 dbSNP
rs1336675170 633 dbSNP
rs190135801 633 dbSNP
rs1221524300 645 dbSNP
rs200723334 647 dbSNP
rs201882895 654 dbSNP
rs199892077 656 dbSNP
rs1225477042 659 dbSNP
rs1246046253 659 dbSNP
rs200986856 660 dbSNP
rs202041067 664 dbSNP
rs181751843 666 dbSNP
rs1008599733 669 dbSNP
rs1018628001 675 dbSNP
rs201332306 677 dbSNP
rs956534078 690 dbSNP
rs201933278 692 dbSNP
rs34744513 697 dbSNP
rs200257892 699 dbSNP
rs970034300 701 dbSNP
rs77817181 709 dbSNP
rs201899307 715 dbSNP
rs1398662032 722 dbSNP
rs200211174 722 dbSNP
rs1406594552 727 dbSNP
rs7985602 730 dbSNP
rs1481361428 731 dbSNP
rs980903942 738 dbSNP
rs199734356 743 dbSNP
rs200438525 745 dbSNP
rs201715407 746 dbSNP
rs199530354 747 dbSNP
rs1488500107 761 dbSNP
rs1264084859 763 dbSNP
rs200618714 770 dbSNP
rs1218204318 774 dbSNP
rs1445551932 776 dbSNP
rs1283620756 781 dbSNP
rs201812037 782 dbSNP
rs1219926777 791 dbSNP
rs199836444 793 dbSNP
rs1326224629 804 dbSNP
rs1242416973 810 dbSNP
rs1223211421 825 dbSNP
rs926912435 827 dbSNP
rs200554215 828 dbSNP
rs201631704 831 dbSNP
rs1428192745 839 dbSNP
rs1344283465 847 dbSNP
rs199983719 852 dbSNP
rs201118467 854 dbSNP
rs1427039689 855 dbSNP
rs761933107 861 dbSNP
rs1175619309 870 dbSNP
rs546388315 871 dbSNP
rs1421368292 873 dbSNP
rs566083669 874 dbSNP
rs1474530779 876 dbSNP
rs767612785 880 dbSNP
rs772243770 883 dbSNP
rs536707991 888 dbSNP
rs202046944 901 dbSNP
rs1469757935 908 dbSNP
rs1159379602 910 dbSNP
rs1204329958 926 dbSNP
rs199922913 927 dbSNP
rs1040619884 933 dbSNP
rs1410556428 934 dbSNP
rs1038483864 946 dbSNP
rs1319275619 946 dbSNP
rs200858807 951 dbSNP
rs201855957 952 dbSNP
rs377510743 953 dbSNP
rs146117624 959 dbSNP
rs1047932947 961 dbSNP
rs1284434507 966 dbSNP
rs1454051396 969 dbSNP
rs1403257219 970 dbSNP
rs1455116781 975 dbSNP
rs887936434 987 dbSNP
rs1006335980 992 dbSNP
rs140111681 993 dbSNP
rs905876102 994 dbSNP
rs1333496035 995 dbSNP
rs537754197 1000 dbSNP
rs775121729 1006 dbSNP
rs1034937326 1007 dbSNP
rs1279806309 1012 dbSNP
rs960694058 1016 dbSNP
rs201928932 1020 dbSNP
rs1184436224 1023 dbSNP
rs200393792 1032 dbSNP
rs1330827785 1035 dbSNP
rs34494076 1038 dbSNP
rs1008819118 1044 dbSNP
rs1040290101 1048 dbSNP
rs892144275 1051 dbSNP
rs763750506 1053 dbSNP
rs200196431 1054 dbSNP
rs1009633047 1061 dbSNP
rs968266896 1068 dbSNP
rs577591189 1081 dbSNP
rs1202111412 1090 dbSNP
rs1293037008 1090 dbSNP
rs199807333 1093 dbSNP
rs1380184206 1095 dbSNP
rs1313693979 1096 dbSNP
rs1446924588 1111 dbSNP
rs200240582 1113 dbSNP
rs1375378867 1117 dbSNP
rs201378819 1118 dbSNP
rs1461480648 1119 dbSNP
rs535281543 1120 dbSNP
rs553492663 1125 dbSNP
rs968196120 1132 dbSNP
rs199608644 1136 dbSNP
rs574453140 1143 dbSNP
rs535663603 1150 dbSNP
rs200736204 1151 dbSNP
rs186532599 1166 dbSNP
rs1479613914 1183 dbSNP
rs964356205 1211 dbSNP
rs143922958 1214 dbSNP
rs574932004 1238 dbSNP
rs200815370 1242 dbSNP
rs960838597 1243 dbSNP
rs150894029 1262 dbSNP
rs201802420 1272 dbSNP
rs554650568 1274 dbSNP
rs929609665 1280 dbSNP
rs200170610 1283 dbSNP
rs1290607332 1287 dbSNP
rs528363015 1294 dbSNP
rs961426387 1304 dbSNP
rs1393646027 1307 dbSNP
rs118141570 1309 dbSNP
rs139485125 1310 dbSNP
rs199955654 1312 dbSNP
rs1223841311 1319 dbSNP
rs201112163 1324 dbSNP
rs202241447 1326 dbSNP
rs932728825 1329 dbSNP
rs765054183 1330 dbSNP
rs1351931946 1331 dbSNP
rs1402892698 1339 dbSNP
rs1363878308 1340 dbSNP
rs1302779759 1345 dbSNP
rs1454566523 1364 dbSNP
rs1365596039 1368 dbSNP
rs1402785143 1369 dbSNP
rs1418976734 1375 dbSNP
rs1201983745 1378 dbSNP
rs1300076292 1379 dbSNP
rs149666125 1380 dbSNP
rs201217026 1381 dbSNP
rs1486670086 1388 dbSNP
rs910405002 1399 dbSNP
rs145528722 1404 dbSNP
rs1324120795 1405 dbSNP
rs1040318734 1407 dbSNP
rs892358017 1412 dbSNP
rs1057186507 1420 dbSNP
rs200341304 1424 dbSNP
rs1344637763 1425 dbSNP
rs1249576537 1429 dbSNP
rs570035356 1431 dbSNP
rs1338710934 1433 dbSNP
rs201471962 1440 dbSNP
rs1276946801 1447 dbSNP
rs1407407845 1448 dbSNP
rs1179217773 1449 dbSNP
rs945097147 1450 dbSNP
rs537470183 1462 dbSNP
rs201969295 1467 dbSNP
rs1269993456 1469 dbSNP
rs200395119 1471 dbSNP
rs201495751 1474 dbSNP
rs1203974200 1475 dbSNP
rs199804767 1481 dbSNP
rs1021269152 1482 dbSNP
rs1264528741 1483 dbSNP
rs74809557 1489 dbSNP
rs1000622473 1490 dbSNP
rs1017312907 1492 dbSNP
rs912278 1494 dbSNP
rs1013690558 1498 dbSNP
rs1168665525 1499 dbSNP
rs1328373752 1505 dbSNP
rs1293721931 1507 dbSNP
rs191388414 1508 dbSNP
rs1383612737 1510 dbSNP
rs961919887 1511 dbSNP
rs181058850 1515 dbSNP
rs568803889 1520 dbSNP
rs950417428 1521 dbSNP
rs1168803338 1531 dbSNP
rs1463863105 1537 dbSNP
rs983733137 1537 dbSNP
rs201596957 1538 dbSNP
rs537337477 1547 dbSNP
rs909420850 1548 dbSNP
rs1444929225 1558 dbSNP
rs942177059 1559 dbSNP
rs980304125 1566 dbSNP
rs1388262510 1577 dbSNP
rs1197274346 1580 dbSNP
rs1337209139 1582 dbSNP
rs927436396 1593 dbSNP
rs535657121 1594 dbSNP
rs912638463 1597 dbSNP
rs944545156 1600 dbSNP
rs1317196390 1604 dbSNP
rs976317740 1606 dbSNP
rs1450568597 1614 dbSNP
rs1325784617 1617 dbSNP
rs557051146 1623 dbSNP
rs141215411 1624 dbSNP
rs1394762165 1626 dbSNP
rs1168408925 1628 dbSNP
rs1424872287 1631 dbSNP
rs1043626579 1635 dbSNP
rs1443498144 1637 dbSNP
rs912277 1658 dbSNP
rs1436068668 1661 dbSNP
rs1249520028 1666 dbSNP
rs1222991405 1669 dbSNP
rs563699529 1670 dbSNP
rs145097279 1671 dbSNP
rs896239608 1690 dbSNP
rs746044642 1695 dbSNP
rs185091766 1696 dbSNP
rs780223417 1708 dbSNP
rs1307768432 1709 dbSNP
rs1405959211 1725 dbSNP
rs1366991695 1732 dbSNP
rs571585193 1734 dbSNP
rs1203739087 1735 dbSNP
rs1300909977 1737 dbSNP
rs1017427038 1747 dbSNP
rs747063023 1748 dbSNP
rs768846993 1751 dbSNP
rs900331836 1759 dbSNP
rs1448011011 1763 dbSNP
rs1408055868 1771 dbSNP
rs1016183808 1772 dbSNP
rs1323552 1775 dbSNP
rs1030472105 1776 dbSNP
rs1411175526 1781 dbSNP
rs1199804046 1790 dbSNP
rs1442273656 1793 dbSNP
rs1490779888 1794 dbSNP
rs950421438 1797 dbSNP
rs2407249 1802 dbSNP
rs1015927444 1809 dbSNP
rs61183001 1811 dbSNP
rs954054672 1812 dbSNP
rs1459183746 1813 dbSNP
rs980334719 1824 dbSNP
rs927466166 1825 dbSNP
rs1006877456 1828 dbSNP
rs1224436554 1829 dbSNP
rs1019749821 1831 dbSNP
rs147621551 1832 dbSNP
rs1345450462 1835 dbSNP
rs1319661780 1836 dbSNP
rs1398462992 1841 dbSNP
rs774163748 1847 dbSNP
rs531015993 1849 dbSNP
rs913744819 1854 dbSNP
rs576507778 1859 dbSNP
rs1426910020 1863 dbSNP
rs1322506069 1866 dbSNP
rs1190444253 1872 dbSNP
rs1477801873 1876 dbSNP
rs536724009 1883 dbSNP
rs1380549755 1888 dbSNP
rs1217973776 1899 dbSNP
rs1445358249 1904 dbSNP
rs1245315054 1908 dbSNP
rs1204852038 1909 dbSNP
rs992941675 1919 dbSNP
rs1261615135 1920 dbSNP
rs372717281 1932 dbSNP
rs541924402 1932 dbSNP
rs1362147353 1939 dbSNP
rs1271572538 1941 dbSNP
rs774514362 1942 dbSNP
rs762025065 1943 dbSNP
rs1237154763 1946 dbSNP
rs1363809504 1966 dbSNP
rs1260444702 1969 dbSNP
rs1336869207 1976 dbSNP
rs1470895745 1979 dbSNP
rs913275282 1989 dbSNP
rs1403860663 1990 dbSNP
rs946073662 1997 dbSNP
rs925186119 2001 dbSNP
rs1043492403 2007 dbSNP
rs937721138 2009 dbSNP
rs1054713999 2014 dbSNP
rs917546701 2016 dbSNP
rs1447954811 2022 dbSNP
rs1247467246 2024 dbSNP
rs925948322 2027 dbSNP
rs749251652 2029 dbSNP
rs115219286 2033 dbSNP
rs1463007581 2043 dbSNP
rs1236245611 2045 dbSNP
rs1465381226 2046 dbSNP
rs570832746 2055 dbSNP
rs900362939 2065 dbSNP
rs1275618637 2072 dbSNP
rs1256250448 2073 dbSNP
rs1212414343 2077 dbSNP
rs897325787 2089 dbSNP
rs866873230 2091 dbSNP
rs868819959 2093 dbSNP
rs1156525583 2102 dbSNP
rs995675810 2105 dbSNP
rs1380419241 2106 dbSNP
rs1302200716 2115 dbSNP
rs1457548184 2116 dbSNP
rs1356051996 2117 dbSNP
rs1168117641 2123 dbSNP
rs4620866 2132 dbSNP
rs1403803609 2133 dbSNP
rs890039209 2137 dbSNP
rs1164231695 2139 dbSNP
rs1451904238 2156 dbSNP
rs375000740 2163 dbSNP
rs547305994 2164 dbSNP
rs1234925759 2172 dbSNP
rs1203486948 2174 dbSNP
rs1482498027 2186 dbSNP
rs1381445251 2192 dbSNP
rs1292075001 2193 dbSNP
rs1004627687 2196 dbSNP
rs1356642481 2199 dbSNP
rs1016370143 2204 dbSNP
rs1306598505 2208 dbSNP
rs1375495866 2213 dbSNP
rs1296199814 2216 dbSNP
rs963017739 2217 dbSNP
rs1370115849 2229 dbSNP
rs1020356308 2231 dbSNP
rs1317785173 2233 dbSNP
rs1230598665 2234 dbSNP
rs1001803760 2243 dbSNP
rs1323369593 2250 dbSNP
rs1034569263 2251 dbSNP
rs1204879157 2264 dbSNP
rs960204858 2265 dbSNP
rs1410826065 2273 dbSNP
rs78272382 2275 dbSNP
rs913400109 2278 dbSNP
rs536095265 2279 dbSNP
rs1487330334 2282 dbSNP
rs1264318145 2287 dbSNP
rs1215927708 2296 dbSNP
rs1249357754 2301 dbSNP
rs1227781575 2308 dbSNP
rs979287974 2309 dbSNP
rs967903319 2312 dbSNP
rs978856167 2319 dbSNP
rs959292054 2327 dbSNP
rs1184079839 2331 dbSNP
rs775001538 2334 dbSNP
rs1454388819 2335 dbSNP
rs1347396118 2340 dbSNP
rs1157589980 2348 dbSNP
rs886297257 2349 dbSNP
rs917598863 2363 dbSNP
rs527746733 2373 dbSNP
rs1202095303 2378 dbSNP
rs949050306 2379 dbSNP
rs375137927 2389 dbSNP
rs942681020 2392 dbSNP
rs1486557730 2408 dbSNP
rs1038941554 2410 dbSNP
rs918323023 2412 dbSNP
rs921812283 2416 dbSNP
rs142117107 2421 dbSNP
rs1052066636 2422 dbSNP
rs1264725029 2425 dbSNP
rs1230817974 2426 dbSNP
rs886260776 2427 dbSNP
rs1360922394 2430 dbSNP
rs889919778 2431 dbSNP
rs1297729163 2440 dbSNP
rs189606839 2446 dbSNP
rs1383057881 2453 dbSNP
rs1005061758 2466 dbSNP
rs1367430436 2487 dbSNP
rs1037429124 2492 dbSNP
rs1007167121 2495 dbSNP
rs898844505 2496 dbSNP
rs539097012 2499 dbSNP
rs763723114 2504 dbSNP
rs754282830 2505 dbSNP
rs1464861703 2512 dbSNP
rs1377486106 2513 dbSNP
rs1345302839 2525 dbSNP
rs1010222097 2534 dbSNP
rs1281314564 2541 dbSNP
rs1020828919 2543 dbSNP
rs34297952 2544 dbSNP
rs1245630833 2545 dbSNP
rs1306320298 2558 dbSNP
rs904601004 2569 dbSNP
rs1000205151 2573 dbSNP
rs1244905524 2574 dbSNP
rs1198451673 2576 dbSNP
rs1032137158 2577 dbSNP
rs896098113 2582 dbSNP
rs990708947 2589 dbSNP
rs1344631974 2590 dbSNP
rs1024833715 2591 dbSNP
rs970822529 2595 dbSNP
rs1434495215 2596 dbSNP
rs757864719 2597 dbSNP
rs1250340714 2602 dbSNP
rs143188717 2616 dbSNP
rs1394859502 2620 dbSNP
rs1206863574 2623 dbSNP
rs750824533 2627 dbSNP
rs758636935 2638 dbSNP
rs1463159862 2643 dbSNP
rs1480003840 2646 dbSNP
rs183402590 2657 dbSNP
rs1444716909 2662 dbSNP
rs780127354 2662 dbSNP
rs979274508 2667 dbSNP
rs1185317340 2672 dbSNP
rs1169820283 2675 dbSNP
rs539829844 2680 dbSNP
rs188967778 2691 dbSNP
rs1484132190 2694 dbSNP
rs1272771788 2700 dbSNP
rs573849942 2709 dbSNP
rs964016172 2711 dbSNP
rs1286077784 2714 dbSNP
rs761238863 2714 dbSNP
rs544433890 2719 dbSNP
rs754981229 2720 dbSNP
rs1365233173 2724 dbSNP
rs562632171 2729 dbSNP
rs1307024574 2731 dbSNP
rs371584272 2740 dbSNP
rs191769068 2746 dbSNP
rs1254925317 2747 dbSNP
rs1160996295 2748 dbSNP
rs1472403483 2750 dbSNP
rs1214507021 2755 dbSNP
rs1364335084 2758 dbSNP
rs1183648509 2761 dbSNP
rs1471491500 2774 dbSNP
rs1250875571 2791 dbSNP
rs114750600 2802 dbSNP
rs1490586297 2809 dbSNP
rs1342278484 2812 dbSNP
rs1230105823 2841 dbSNP
rs987386025 2844 dbSNP
rs1292064511 2846 dbSNP
rs907717295 2851 dbSNP
rs564556043 2852 dbSNP
rs1450730756 2857 dbSNP
rs940505317 2858 dbSNP
rs148269879 2865 dbSNP
rs746070405 2865 dbSNP
rs1405150316 2867 dbSNP
rs1034365304 2873 dbSNP
rs1248310402 2884 dbSNP
rs1320960031 2885 dbSNP
rs1385497809 2898 dbSNP
rs1455620025 2916 dbSNP
rs898878832 2916 dbSNP
rs1410914311 2929 dbSNP
rs778609845 2936 dbSNP
rs1478448600 2939 dbSNP
rs1248681712 2941 dbSNP
rs1055505544 2942 dbSNP
rs1451376552 2944 dbSNP
rs1161808660 2948 dbSNP
rs1012015188 2954 dbSNP
rs1025351022 2965 dbSNP
rs1267856700 2967 dbSNP
rs895472115 2969 dbSNP
rs1014944607 2973 dbSNP
rs745673232 2974 dbSNP
rs1325869157 2977 dbSNP
rs1326481587 2996 dbSNP
rs1322017433 3000 dbSNP
rs1432758887 3001 dbSNP
rs1387845898 3003 dbSNP
rs1025327791 3005 dbSNP
rs1415962708 3007 dbSNP
rs952454506 3008 dbSNP
rs903364154 3013 dbSNP
rs910956727 3014 dbSNP
rs1000286945 3023 dbSNP
rs942886727 3029 dbSNP
rs1033137368 3033 dbSNP
rs1204634649 3036 dbSNP
rs1314306597 3038 dbSNP
rs1368019401 3044 dbSNP
rs1218244846 3045 dbSNP
rs546588989 3045 dbSNP
rs1299116056 3061 dbSNP
rs1229944320 3064 dbSNP
rs868637505 3065 dbSNP
rs1337303591 3066 dbSNP
rs1450195121 3079 dbSNP
rs922730267 3080 dbSNP
rs1333312885 3081 dbSNP
rs1312350476 3095 dbSNP
rs1355203725 3096 dbSNP
rs771908992 3098 dbSNP
rs140469619 3101 dbSNP
rs904533830 3117 dbSNP
rs1447739455 3119 dbSNP
rs1389704576 3134 dbSNP
rs935989413 3138 dbSNP
rs1236045184 3144 dbSNP
rs1209885492 3152 dbSNP
rs568779175 3157 dbSNP
rs1030099328 3166 dbSNP
rs894560820 3174 dbSNP
rs1225804400 3176 dbSNP
rs1207925205 3187 dbSNP
rs1315197887 3190 dbSNP
rs1012067776 3199 dbSNP
rs1046236494 3201 dbSNP
rs1283337163 3212 dbSNP
rs1442685055 3221 dbSNP
rs1371326289 3223 dbSNP
rs1466247420 3228 dbSNP
rs955376867 3231 dbSNP
rs906319752 3234 dbSNP
rs1369991046 3239 dbSNP
rs529522316 3244 dbSNP
rs1426023038 3247 dbSNP
rs1412279045 3254 dbSNP
rs560250938 3256 dbSNP
rs1473118680 3267 dbSNP
rs777030500 3269 dbSNP
rs1202557640 3274 dbSNP
rs1482548410 3276 dbSNP
rs907749705 3277 dbSNP
rs1265478540 3278 dbSNP
rs1025969678 3286 dbSNP
rs952381973 3287 dbSNP
rs1160431824 3290 dbSNP
rs1391451427 3294 dbSNP
rs940520735 3304 dbSNP
rs973274249 3328 dbSNP
rs1286282490 3334 dbSNP
rs1005220280 3335 dbSNP
rs1350123831 3343 dbSNP
rs559557128 3350 dbSNP
rs528362837 3357 dbSNP
rs1348274623 3365 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124B_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + B ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaUUCUGGUUCGGAGGAAggga 5'
            |:|:  | ||: ||||    
Target 5' -uAGGGAGAUGCUGCCUU---- 3'
1 - 17
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124B_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + B
Location of target site ENST00000282018.3 | 3UTR | UAGGGAGAUGCUGCCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
215 hsa-miR-4747-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061689 BTG2 BTG anti-proliferation factor 2 2 2
MIRT062834 BCL7A BCL tumor suppressor 7A 2 2
MIRT079371 CCDC137 coiled-coil domain containing 137 2 2
MIRT081190 MIDN midnolin 2 4
MIRT081724 ZNF507 zinc finger protein 507 2 2
MIRT110565 ZMYND11 zinc finger MYND-type containing 11 2 2
MIRT133724 SKI SKI proto-oncogene 2 4
MIRT146689 MINK1 misshapen like kinase 1 2 2
MIRT150676 SLC27A1 solute carrier family 27 member 1 2 2
MIRT159196 NRBP1 nuclear receptor binding protein 1 2 2
MIRT180865 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT190659 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT196111 MPRIP myosin phosphatase Rho interacting protein 2 2
MIRT232390 SP1 Sp1 transcription factor 2 2
MIRT331070 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 4
MIRT338632 SHMT2 serine hydroxymethyltransferase 2 2 2
MIRT407441 CTDSP1 CTD small phosphatase 1 2 2
MIRT444276 NKX6-1 NK6 homeobox 1 2 2
MIRT444834 PDE6D phosphodiesterase 6D 2 2
MIRT445452 EXT1 exostosin glycosyltransferase 1 2 2
MIRT445644 NPY4R neuropeptide Y receptor Y4 2 2
MIRT446157 RPL12 ribosomal protein L12 2 2
MIRT446608 HIP1 huntingtin interacting protein 1 2 2
MIRT447108 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT449314 MRO maestro 2 2
MIRT450305 DRAXIN dorsal inhibitory axon guidance protein 2 2
MIRT451245 ZNF444 zinc finger protein 444 2 2
MIRT451714 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT451908 ILK integrin linked kinase 2 2
MIRT452183 KIAA1456 KIAA1456 2 2
MIRT452610 REPIN1 replication initiator 1 2 2
MIRT453422 GLG1 golgi glycoprotein 1 2 2
MIRT454006 ALKBH5 alkB homolog 5, RNA demethylase 2 2
MIRT455072 ARHGAP39 Rho GTPase activating protein 39 2 2
MIRT455319 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT455357 KDM5C lysine demethylase 5C 2 2
MIRT455589 TAF12 TATA-box binding protein associated factor 12 2 2
MIRT455711 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT455860 TMEM254 transmembrane protein 254 2 2
MIRT455919 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 2
MIRT455946 CYP4A22 cytochrome P450 family 4 subfamily A member 22 2 2
MIRT456935 LRP10 LDL receptor related protein 10 2 2
MIRT457223 AP3D1 adaptor related protein complex 3 delta 1 subunit 2 2
MIRT457431 NOL10 nucleolar protein 10 2 2
MIRT457470 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457907 ZNF212 zinc finger protein 212 2 2
MIRT458046 TSEN54 tRNA splicing endonuclease subunit 54 2 2
MIRT458073 RNLS renalase, FAD dependent amine oxidase 2 2
MIRT458234 NXPH3 neurexophilin 3 2 2
MIRT458307 TNFAIP8L3 TNF alpha induced protein 8 like 3 2 2
MIRT458378 ITM2C integral membrane protein 2C 2 2
MIRT458967 ZNF436 zinc finger protein 436 2 2
MIRT459099 CYP4A11 cytochrome P450 family 4 subfamily A member 11 2 2
MIRT459446 TMEM37 transmembrane protein 37 2 2
MIRT459671 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT460727 ASXL3 additional sex combs like 3, transcriptional regulator 2 2
MIRT460744 SRP14 signal recognition particle 14 2 2
MIRT461531 C14orf1 ergosterol biosynthesis 28 homolog 2 2
MIRT461752 DDX11 DEAD/H-box helicase 11 2 2
MIRT461837 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT462019 RIF1 replication timing regulatory factor 1 2 2
MIRT462631 PHF5A PHD finger protein 5A 2 2
MIRT462772 ZNF8 zinc finger protein 8 2 2
MIRT463032 ZNF689 zinc finger protein 689 2 2
MIRT463886 WNT7B Wnt family member 7B 2 2
MIRT463995 WDTC1 WD and tetratricopeptide repeats 1 2 2
MIRT464371 URM1 ubiquitin related modifier 1 2 2
MIRT465342 TPM3 tropomyosin 3 2 4
MIRT465515 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465602 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT465697 TNPO2 transportin 2 2 10
MIRT466988 SSRP1 structure specific recognition protein 1 2 4
MIRT467630 SLC7A5 solute carrier family 7 member 5 2 2
MIRT468132 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT468322 SF3B3 splicing factor 3b subunit 3 2 2
MIRT468502 SESN2 sestrin 2 2 2
MIRT468881 RREB1 ras responsive element binding protein 1 2 2
MIRT469322 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT469562 RARA retinoic acid receptor alpha 2 2
MIRT469898 PTRF caveolae associated protein 1 2 2
MIRT470045 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT470068 PTGES2 prostaglandin E synthase 2 2 2
MIRT470238 PRRC2A proline rich coiled-coil 2A 2 2
MIRT470390 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT470500 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT470689 POLR2D RNA polymerase II subunit D 2 2
MIRT470704 POGK pogo transposable element derived with KRAB domain 2 2
MIRT471083 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472482 NACC2 NACC family member 2 2 2
MIRT473583 MAT2A methionine adenosyltransferase 2A 2 2
MIRT474554 KLHDC3 kelch domain containing 3 2 2
MIRT474651 KLF13 Kruppel like factor 13 2 2
MIRT474843 KHSRP KH-type splicing regulatory protein 2 2
MIRT474934 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT475573 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT476045 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT476080 GRB2 growth factor receptor bound protein 2 2 2
MIRT476440 GBA2 glucosylceramidase beta 2 2 2
MIRT476764 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT478785 CRTC2 CREB regulated transcription coactivator 2 2 2
MIRT479287 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT479505 CDH6 cadherin 6 2 2
MIRT479732 CCND1 cyclin D1 2 6
MIRT480352 C5orf24 chromosome 5 open reading frame 24 2 2
MIRT480407 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT480859 BHLHB9 basic helix-loop-helix family member b9 2 2
MIRT481445 ARRB2 arrestin beta 2 2 2
MIRT481732 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT481824 AP2M1 adaptor related protein complex 2 mu 1 subunit 2 2
MIRT482566 ABHD2 abhydrolase domain containing 2 2 2
MIRT482607 ABHD14B abhydrolase domain containing 14B 2 2
MIRT483144 SYCE1L synaptonemal complex central element protein 1 like 2 2
MIRT483214 APOA1 apolipoprotein A1 2 6
MIRT483878 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT483917 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 2
MIRT483939 LENG8 leukocyte receptor cluster member 8 2 4
MIRT484420 SNX19 sorting nexin 19 2 2
MIRT484489 SLC9A1 solute carrier family 9 member A1 2 2
MIRT484612 SIX3 SIX homeobox 3 2 6
MIRT484705 RNF11 ring finger protein 11 2 2
MIRT485107 SHISA6 shisa family member 6 2 2
MIRT485354 MYO1C myosin IC 2 4
MIRT485609 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT487311 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT487417 CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 2 2
MIRT487695 CDK14 cyclin dependent kinase 14 2 2
MIRT487791 GPR20 G protein-coupled receptor 20 2 4
MIRT488042 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT488058 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT488237 DNLZ DNL-type zinc finger 2 4
MIRT488764 FXYD1 FXYD domain containing ion transport regulator 1 2 2
MIRT489401 TUBB2A tubulin beta 2A class IIa 2 2
MIRT489777 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT490099 FN3K fructosamine 3 kinase 2 2
MIRT490290 ISL2 ISL LIM homeobox 2 2 2
MIRT490378 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT491329 GFER growth factor, augmenter of liver regeneration 2 2
MIRT491435 MSX2 msh homeobox 2 2 2
MIRT491769 ZNF385A zinc finger protein 385A 2 2
MIRT491922 WNK2 WNK lysine deficient protein kinase 2 2 2
MIRT491983 UNK unkempt family zinc finger 2 2
MIRT492228 SLC48A1 solute carrier family 48 member 1 2 2
MIRT492404 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT492767 PDGFB platelet derived growth factor subunit B 2 2
MIRT492966 NCS1 neuronal calcium sensor 1 2 2
MIRT493295 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT493650 HDLBP high density lipoprotein binding protein 2 2
MIRT493913 FAM127B retrotransposon Gag like 8A 2 4
MIRT495601 NKX2-5 NK2 homeobox 5 2 2
MIRT496875 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT498514 MYH14 myosin heavy chain 14 2 2
MIRT499178 RBPJL recombination signal binding protein for immunoglobulin kappa J region like 2 2
MIRT502143 KIF5B kinesin family member 5B 2 8
MIRT502692 CSNK1G1 casein kinase 1 gamma 1 2 4
MIRT508460 HOXB6 homeobox B6 2 4
MIRT510430 ZNF207 zinc finger protein 207 2 6
MIRT511837 GPATCH8 G-patch domain containing 8 2 4
MIRT512368 CPM carboxypeptidase M 2 2
MIRT512506 BTBD19 BTB domain containing 19 2 2
MIRT513065 ANKRD45 ankyrin repeat domain 45 2 2
MIRT513267 SCUBE1 signal peptide, CUB domain and EGF like domain containing 1 2 4
MIRT513575 EVX1 even-skipped homeobox 1 2 2
MIRT515051 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515790 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT521657 PRKD3 protein kinase D3 2 2
MIRT522679 LUZP1 leucine zipper protein 1 2 6
MIRT528845 RAB32 RAB32, member RAS oncogene family 2 2
MIRT533569 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT543738 DHCR7 7-dehydrocholesterol reductase 2 2
MIRT544295 TSPYL1 TSPY like 1 2 2
MIRT544857 MYH2 myosin heavy chain 2 2 4
MIRT557323 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT560522 TMEM98 transmembrane protein 98 2 2
MIRT561565 SLC6A9 solute carrier family 6 member 9 2 2
MIRT562374 ERI2 ERI1 exoribonuclease family member 2 2 2
MIRT565780 SEMA6D semaphorin 6D 2 2
MIRT569548 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT569944 PRRT2 proline rich transmembrane protein 2 2 2
MIRT570016 COL1A2 collagen type I alpha 2 chain 2 2
MIRT572163 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT572322 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT573495 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT574139 MARVELD1 MARVEL domain containing 1 2 2
MIRT609449 CCDC149 coiled-coil domain containing 149 2 2
MIRT610619 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT623355 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT629854 ACOX1 acyl-CoA oxidase 1 2 2
MIRT630516 CDC73 cell division cycle 73 2 2
MIRT632535 PSMB2 proteasome subunit beta 2 2 2
MIRT633975 SLC35E2 solute carrier family 35 member E2 2 2
MIRT636408 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT641722 LTBR lymphotoxin beta receptor 2 2
MIRT642661 RGS6 regulator of G protein signaling 6 2 2
MIRT649649 MAST3 microtubule associated serine/threonine kinase 3 2 2
MIRT650367 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT651355 ZBTB40 zinc finger and BTB domain containing 40 2 2
MIRT664840 HUS1 HUS1 checkpoint clamp component 2 2
MIRT667322 MYH9 myosin heavy chain 9 2 2
MIRT670680 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT674922 TRPM6 transient receptor potential cation channel subfamily M member 6 2 2
MIRT675919 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT676493 GJD3 gap junction protein delta 3 2 2
MIRT680162 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT688008 GSN gelsolin 2 2
MIRT688997 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT700337 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT701344 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT703519 FKBP15 FK506 binding protein 15 2 2
MIRT703901 EPT1 selenoprotein I 2 2
MIRT705565 ARHGEF18 Rho/Rac guanine nucleotide exchange factor 18 2 2
MIRT709709 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT713108 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT718426 ZNF85 zinc finger protein 85 2 2
MIRT719236 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719326 STAC SH3 and cysteine rich domain 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4747 Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4747-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-4747-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4747-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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