pre-miRNA Information
pre-miRNA hsa-mir-6787   
Genomic Coordinates chr17: 82236668 - 82236728
Description Homo sapiens miR-6787 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6787-5p
Sequence 6| UGGCGGGGGUAGAGCUGGCUGC |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs778888046 4 dbSNP
rs772018061 5 dbSNP
rs760886644 6 dbSNP
rs776925052 7 dbSNP
rs760060985 8 dbSNP
rs1432528063 9 dbSNP
rs778772390 10 dbSNP
rs924024166 11 dbSNP
rs201523090 13 dbSNP
rs1451075810 17 dbSNP
rs1378844609 18 dbSNP
Putative Targets

Gene Information
Gene Symbol PTGR2   
Synonyms HEL-S-298, PGR2, ZADH1
Description prostaglandin reductase 2
Transcript NM_001146154   
Other Transcripts NM_001146155 , NM_152444   
Expression
Putative miRNA Targets on PTGR2
3'UTR of PTGR2
(miRNA target sites are highlighted)
>PTGR2|NM_001146154|3'UTR
   1 TTGCTGTAAATGTCATCAAGGCAATCATAGATTTCTTTTCCATTTTGCATATTTTCAAAGATATGTTAAAAAATCCTTAG
  81 ACTATACATAGCTCTTGATTTAAATGTGATCATAGGTGTTATTTTTAGTTGCATAGGGTATTTGATACAATCATTAATGG
 161 ATCATACACAATAGGTTTTTAAAAATTAATAACTTTTAGTAATTACTTTTATTAATTTAAAATAGAACGCTTGAGAGGCA
 241 CTTTGTAAAGATTTGTTAAACTGGAAACGTTTTACATGATCTGATACAACCATTAATGAATCATACACAATAGGTTTTTT
 321 AAAATTAATATTAATAACTTTTATTAATTTAAAATAGAATGCTTAAAATAAAATAGAATGCTTGAGAGGCACTGAGTAAA
 401 GATTTGTTGAACTGGAAATGTTTTACATGATTCTTAAACTGAAACTTGGTGTAAAAATAGAATTGAGATGGCCTTTTTTT
 481 CACATTGTAGACTGAAAAGAGACTTAATGGTATGATGTGTACATAGGGACTGGGGGCAGGATTGGGGGTTTCGGAGCTTG
 561 TGTAACAGTTTTTGGGATAGGAGACCAGCGGTTTTGGGTTGGGATTAGTATGGGAAGATAAATAACTTAGGTTGGTTAAG
 641 TTGACAAGATTTACTCCAGAGGATCATCTCTTTGTATTTGCCAAATAATTTACTGTATAGCCTAAAAACTCCATATATAT
 721 TGAGAAAAGCATATGTTTATTTTAGGTTAGCAGGCACATACTGTCAAGTTGTAAAGATTGAGAGGGCAAACAGATGTAAA
 801 CATCACTTGTAGGTGATTAAAAAGATTGACAGCCGGGCCTGATGTCTCAAGCCTGTAATCCTAGCACTTTGGGAGGCAGA
 881 GGCGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACACGGTGAAACCCCATCTCTCTAAAAATACAAA
 961 AATTAGCTGGGCGTGGTGGCACACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCTGGAGAATCATTTGAACCTGGGA
1041 GGGGGAGGTTGCCGTGAGCTGAGCTTGCACCATTGCACTCCAGCCTGGGCGACAAGAGTGAAATTCCATCTCAAAAAACA
1121 AAAACAGATTGACAACAAAGACAGTTTCAGAAAATGACAGGACTGGGCAAATTAACAAATGTTTGTAAACATGAATGTTC
1201 AGGAACTACTGATGTACCTCAAAAGTTTGTTTTATTAATTGTACTCAACCCTCGCAGAACAGTAAAACTGAAGATTATTG
1281 TTTCTGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgucggucGAGAUGGGGGCGgu 5'
                  ||| ||||:|||  
Target 5' taattgtaCTCAACCCTCGCag 3'
1236 - 1257 126.00 -19.30
2
miRNA  3' cgUCG---GUCGAGA--UGGGGGCGGu 5'
            |||   || | :|  ||:|| ||| 
Target 5' tgAGCTTGCACCATTGCACTCCAGCCt 3'
1060 - 1086 110.00 -15.70
3
miRNA  3' cgucgGUCGAGA-UGGGGGCGGu 5'
               |: || | |:||| ||: 
Target 5' gcacaCGCCTGTAATCCCAGCTa 3'
979 - 1001 105.00 -15.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31491815 6 COSMIC
COSN31587250 31 COSMIC
COSN16946563 92 COSMIC
COSN31554651 93 COSMIC
COSN14823036 149 COSMIC
COSN20758035 720 COSMIC
COSN25034179 1041 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1413396342 4 dbSNP
rs747271377 12 dbSNP
rs757800218 16 dbSNP
rs781762072 18 dbSNP
rs748876739 25 dbSNP
rs1288022502 27 dbSNP
rs186749702 29 dbSNP
rs1242814182 31 dbSNP
rs1222407795 32 dbSNP
rs1310240066 32 dbSNP
rs1344655954 34 dbSNP
rs773947699 42 dbSNP
rs1197110743 43 dbSNP
rs959063789 48 dbSNP
rs1354722450 49 dbSNP
rs747863356 50 dbSNP
rs984662476 62 dbSNP
rs1245957267 68 dbSNP
rs529213155 68 dbSNP
rs1244532323 93 dbSNP
rs111529914 110 dbSNP
rs776247577 112 dbSNP
rs962164888 119 dbSNP
rs1409351704 127 dbSNP
rs1351120439 133 dbSNP
rs1331137870 136 dbSNP
rs1385268891 139 dbSNP
rs1360786888 143 dbSNP
rs1212063809 150 dbSNP
rs1248827772 153 dbSNP
rs1437500610 154 dbSNP
rs976046260 156 dbSNP
rs546051754 162 dbSNP
rs559515254 163 dbSNP
rs1234768956 168 dbSNP
rs1449563271 170 dbSNP
rs967842489 179 dbSNP
rs761384578 187 dbSNP
rs1470097116 190 dbSNP
rs924780909 193 dbSNP
rs947524540 199 dbSNP
rs769564537 202 dbSNP
rs556003258 203 dbSNP
rs564770996 207 dbSNP
rs1426450948 211 dbSNP
rs902234069 211 dbSNP
rs1231134183 222 dbSNP
rs1330787866 224 dbSNP
rs1324434983 226 dbSNP
rs1441379278 227 dbSNP
rs1396317090 229 dbSNP
rs15799 230 dbSNP
rs1408593801 231 dbSNP
rs987762862 232 dbSNP
rs1159836518 234 dbSNP
rs912140991 237 dbSNP
rs551551368 242 dbSNP
rs1376773950 251 dbSNP
rs896146520 269 dbSNP
rs571792229 270 dbSNP
rs1246534212 274 dbSNP
rs1044941065 277 dbSNP
rs1465788473 279 dbSNP
rs1286923389 283 dbSNP
rs1198855099 293 dbSNP
rs879832289 293 dbSNP
rs1451368628 294 dbSNP
rs1236718973 315 dbSNP
rs751340281 321 dbSNP
rs1384242744 324 dbSNP
rs1345784786 329 dbSNP
rs930760065 329 dbSNP
rs1320192102 330 dbSNP
rs1412275593 333 dbSNP
rs766399289 334 dbSNP
rs1173914902 335 dbSNP
rs1436145976 338 dbSNP
rs1006437821 339 dbSNP
rs765976358 343 dbSNP
rs1247581564 345 dbSNP
rs1014767853 350 dbSNP
rs1250082387 354 dbSNP
rs1244344054 357 dbSNP
rs1339164304 361 dbSNP
rs1196687402 364 dbSNP
rs1260238965 370 dbSNP
rs531080979 371 dbSNP
rs1460141418 373 dbSNP
rs997600364 379 dbSNP
rs1227466430 380 dbSNP
rs1030455611 388 dbSNP
rs551205954 390 dbSNP
rs1243790903 397 dbSNP
rs1425591963 419 dbSNP
rs191997299 428 dbSNP
rs17182656 434 dbSNP
rs758112851 436 dbSNP
rs1368375705 447 dbSNP
rs1167561622 448 dbSNP
rs939178302 451 dbSNP
rs1422038776 452 dbSNP
rs1162013804 459 dbSNP
rs1056336123 461 dbSNP
rs938885266 474 dbSNP
rs1190225828 479 dbSNP
rs1482112754 481 dbSNP
rs1251366345 491 dbSNP
rs1205415227 495 dbSNP
rs1403516883 505 dbSNP
rs1274806036 511 dbSNP
rs1226365912 520 dbSNP
rs1293814081 524 dbSNP
rs1416156849 525 dbSNP
rs72723752 530 dbSNP
rs1307054865 534 dbSNP
rs538669321 536 dbSNP
rs917687215 541 dbSNP
rs565577131 553 dbSNP
rs947699138 554 dbSNP
rs534631832 558 dbSNP
rs1021974776 563 dbSNP
rs1044748495 569 dbSNP
rs1379975798 577 dbSNP
rs1411268914 579 dbSNP
rs887656804 587 dbSNP
rs1481763884 590 dbSNP
rs529406012 594 dbSNP
rs1006139532 595 dbSNP
rs1326284271 596 dbSNP
rs8007148 609 dbSNP
rs1235013770 613 dbSNP
rs1280467928 623 dbSNP
rs897654578 633 dbSNP
rs1305724549 635 dbSNP
rs997381131 642 dbSNP
rs1375150610 643 dbSNP
rs1291425645 645 dbSNP
rs1203311064 646 dbSNP
rs1395599498 649 dbSNP
rs1328545404 652 dbSNP
rs1263937886 655 dbSNP
rs1030403020 657 dbSNP
rs11369964 667 dbSNP
rs60798963 667 dbSNP
rs577325996 673 dbSNP
rs1261040399 675 dbSNP
rs756298318 679 dbSNP
rs79238901 685 dbSNP
rs969338621 688 dbSNP
rs754127732 690 dbSNP
rs924883739 694 dbSNP
rs1260062984 697 dbSNP
rs1479962998 715 dbSNP
rs960178254 716 dbSNP
rs1019232391 717 dbSNP
rs965009189 721 dbSNP
rs975373211 723 dbSNP
rs527486673 733 dbSNP
rs992972462 734 dbSNP
rs917635048 735 dbSNP
rs947814835 747 dbSNP
rs1407771182 752 dbSNP
rs1361935631 755 dbSNP
rs1045087435 756 dbSNP
rs1450998125 758 dbSNP
rs1357438037 759 dbSNP
rs1175667467 762 dbSNP
rs920616765 763 dbSNP
rs114078920 764 dbSNP
rs941725220 768 dbSNP
rs1036269576 769 dbSNP
rs1383239782 770 dbSNP
rs573858411 779 dbSNP
rs1486574189 781 dbSNP
rs983540815 782 dbSNP
rs1209487643 783 dbSNP
rs1348210468 785 dbSNP
rs1282001405 793 dbSNP
rs1051613307 804 dbSNP
rs889173694 810 dbSNP
rs1223224026 811 dbSNP
rs758089872 815 dbSNP
rs1313392953 816 dbSNP
rs1384384280 817 dbSNP
rs1007647591 820 dbSNP
rs1284173671 820 dbSNP
rs1022169386 822 dbSNP
rs907951277 826 dbSNP
rs904507787 827 dbSNP
rs999284649 829 dbSNP
rs939209371 831 dbSNP
rs1237051340 834 dbSNP
rs542589286 835 dbSNP
rs1430278205 836 dbSNP
rs1486175315 839 dbSNP
rs1031897234 850 dbSNP
rs1186672658 854 dbSNP
rs1485708630 864 dbSNP
rs1259182134 877 dbSNP
rs894941496 879 dbSNP
rs1202511837 880 dbSNP
rs948004688 884 dbSNP
rs1043996625 885 dbSNP
rs113634161 886 dbSNP
rs1320504258 897 dbSNP
rs1490128825 899 dbSNP
rs992921744 900 dbSNP
rs1233987233 903 dbSNP
rs1023092160 904 dbSNP
rs113327319 912 dbSNP
rs1390999930 921 dbSNP
rs1397443684 936 dbSNP
rs980538227 941 dbSNP
rs1415667257 943 dbSNP
rs533693217 943 dbSNP
rs1164045788 947 dbSNP
rs143382580 950 dbSNP
rs1179353649 972 dbSNP
rs187080572 973 dbSNP
rs1157786334 974 dbSNP
rs1363911735 980 dbSNP
rs1019127401 983 dbSNP
rs1337083076 985 dbSNP
rs1420934465 986 dbSNP
rs919147784 987 dbSNP
rs1238393718 988 dbSNP
rs965209454 1007 dbSNP
rs1336634733 1011 dbSNP
rs747795318 1021 dbSNP
rs1392920663 1024 dbSNP
rs1051559847 1027 dbSNP
rs1325160319 1034 dbSNP
rs1364184106 1036 dbSNP
rs1028320984 1042 dbSNP
rs1304120316 1043 dbSNP
rs1370071439 1044 dbSNP
rs952106954 1054 dbSNP
rs1431824987 1055 dbSNP
rs551195783 1066 dbSNP
rs1470258139 1069 dbSNP
rs1266765031 1072 dbSNP
rs1043126955 1073 dbSNP
rs567793800 1081 dbSNP
rs1317613165 1084 dbSNP
rs537747000 1088 dbSNP
rs907855969 1091 dbSNP
rs939448239 1092 dbSNP
rs992169144 1093 dbSNP
rs72627116 1094 dbSNP
rs1014457296 1096 dbSNP
rs546947363 1101 dbSNP
rs567155638 1109 dbSNP
rs970238283 1113 dbSNP
rs138682977 1128 dbSNP
rs1248212209 1130 dbSNP
rs1043680693 1131 dbSNP
rs1394077495 1136 dbSNP
rs189615394 1141 dbSNP
rs935008499 1152 dbSNP
rs1441010353 1157 dbSNP
rs1240869572 1159 dbSNP
rs1193022736 1161 dbSNP
rs971724509 1162 dbSNP
rs772969104 1169 dbSNP
rs933013694 1181 dbSNP
rs1281306163 1182 dbSNP
rs1234757897 1185 dbSNP
rs1052118748 1191 dbSNP
rs1268368204 1194 dbSNP
rs890766794 1198 dbSNP
rs1326921918 1201 dbSNP
rs1319772981 1202 dbSNP
rs1412369437 1204 dbSNP
rs1007991153 1214 dbSNP
rs1436982042 1221 dbSNP
rs569940470 1221 dbSNP
rs17182670 1222 dbSNP
rs943192699 1225 dbSNP
rs1043292128 1226 dbSNP
rs1185987577 1232 dbSNP
rs900710831 1235 dbSNP
rs1297832044 1243 dbSNP
rs1258506018 1248 dbSNP
rs1213229922 1251 dbSNP
rs377648035 1254 dbSNP
rs1374238391 1267 dbSNP
rs1270671833 1268 dbSNP
rs1213750013 1271 dbSNP
rs1340054449 1274 dbSNP
rs1271851388 1277 dbSNP
rs1230926026 1287 dbSNP
rs1354206147 1293 dbSNP
rs770917145 1297 dbSNP
rs934743387 1305 dbSNP
rs1352368211 1308 dbSNP
rs1449176003 1313 dbSNP
rs536778293 1315 dbSNP
rs1053170544 1320 dbSNP
rs1422280138 1322 dbSNP
rs1382006042 1326 dbSNP
rs1027928052 1334 dbSNP
rs1163338484 1339 dbSNP
rs556721067 1345 dbSNP
rs952313791 1348 dbSNP
rs149320564 1358 dbSNP
rs564940568 1369 dbSNP
rs1305566759 1370 dbSNP
rs759562966 1373 dbSNP
rs1251599676 1383 dbSNP
rs1232504197 1384 dbSNP
rs1203640650 1388 dbSNP
rs1438120694 1392 dbSNP
rs1014238058 1393 dbSNP
rs1211685019 1393 dbSNP
rs1044611207 1395 dbSNP
rs906128358 1396 dbSNP
rs1293414222 1403 dbSNP
rs1005689870 1404 dbSNP
rs1458806982 1407 dbSNP
rs1017528633 1410 dbSNP
rs992294832 1413 dbSNP
rs1444668840 1414 dbSNP
rs1443408804 1415 dbSNP
rs916643059 1419 dbSNP
rs749829950 1424 dbSNP
rs1324509055 1425 dbSNP
rs62003709 1435 dbSNP
rs979658077 1437 dbSNP
rs573101886 1443 dbSNP
rs1401373680 1460 dbSNP
rs1407531979 1462 dbSNP
rs545410923 1463 dbSNP
rs910439896 1469 dbSNP
rs964993682 1470 dbSNP
rs978577862 1483 dbSNP
rs1468014362 1503 dbSNP
rs1448779890 1512 dbSNP
rs1273719628 1516 dbSNP
rs1285889501 1517 dbSNP
rs1314556222 1523 dbSNP
rs935249567 1525 dbSNP
rs1052320198 1529 dbSNP
rs925775876 1531 dbSNP
rs62003710 1532 dbSNP
rs1440616738 1535 dbSNP
rs1053118987 1539 dbSNP
rs1328433562 1541 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cgucggucgagaugGGGGCGGu 5'
                        ||||||| 
Target 5' ------uggggaggCCCCGCC- 3'
1 - 15
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000555661.1 | 3UTR | UGGGGAGGCCCCGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
90 hsa-miR-6787-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT449091 XPO6 exportin 6 2 2
MIRT449991 PSMG1 proteasome assembly chaperone 1 2 2
MIRT454608 MYADM myeloid associated differentiation marker 2 2
MIRT456116 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT457064 TOR4A torsin family 4 member A 2 2
MIRT461023 SDF4 stromal cell derived factor 4 2 2
MIRT467197 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT471711 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472566 NACC1 nucleus accumbens associated 1 2 2
MIRT476079 GRB2 growth factor receptor bound protein 2 2 2
MIRT480150 CALR calreticulin 2 2
MIRT483027 KHSRP KH-type splicing regulatory protein 2 4
MIRT483498 STMN3 stathmin 3 2 4
MIRT483728 THSD4 thrombospondin type 1 domain containing 4 2 2
MIRT484550 BARHL1 BarH like homeobox 1 2 6
MIRT484684 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486059 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT486116 INO80E INO80 complex subunit E 2 2
MIRT486313 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486525 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486857 DPF1 double PHD fingers 1 2 2
MIRT487352 PHF15 jade family PHD finger 2 1 1
MIRT487582 FAM83H family with sequence similarity 83 member H 2 4
MIRT487792 GPR20 G protein-coupled receptor 20 2 4
MIRT488104 POU3F1 POU class 3 homeobox 1 2 2
MIRT488786 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT489361 SYNGR1 synaptogyrin 1 2 4
MIRT489387 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489680 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT489731 GNAI2 G protein subunit alpha i2 2 4
MIRT489750 TACC3 transforming acidic coiled-coil containing protein 3 2 2
MIRT490029 PCSK4 proprotein convertase subtilisin/kexin type 4 2 2
MIRT490379 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT490580 SLC47A1 solute carrier family 47 member 1 2 2
MIRT490753 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT491187 JUND JunD proto-oncogene, AP-1 transcription factor subunit 2 4
MIRT491301 VGF VGF nerve growth factor inducible 2 2
MIRT491462 HOXB8 homeobox B8 2 2
MIRT491702 PDZD4 PDZ domain containing 4 2 2
MIRT491724 RTN4R reticulon 4 receptor 2 2
MIRT491737 SEMA3F semaphorin 3F 2 2
MIRT491984 UNK unkempt family zinc finger 2 2
MIRT492844 NRGN neurogranin 2 2
MIRT492936 NEUROD2 neuronal differentiation 2 2 4
MIRT493713 H2AFX H2A histone family member X 2 2
MIRT494623 ASB6 ankyrin repeat and SOCS box containing 6 2 4
MIRT494703 ARHGAP31 Rho GTPase activating protein 31 2 2
MIRT495602 NKX2-5 NK2 homeobox 5 2 2
MIRT495750 PDE4C phosphodiesterase 4C 2 4
MIRT500367 ZNF385A zinc finger protein 385A 2 2
MIRT501161 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501702 PCGF3 polycomb group ring finger 3 2 6
MIRT504922 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT517945 TRIM59 tripartite motif containing 59 2 2
MIRT524212 DDI2 DNA damage inducible 1 homolog 2 2 6
MIRT531186 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 2 2
MIRT531972 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT558055 EVI5L ecotropic viral integration site 5 like 2 2
MIRT560482 LACE1 AFG1 like ATPase 2 2
MIRT563217 FXN frataxin 2 2
MIRT569095 FSCN1 fascin actin-bundling protein 1 2 2
MIRT569522 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569531 CTTN cortactin 2 2
MIRT569848 RGS5 regulator of G protein signaling 5 2 2
MIRT570738 ANKRD52 ankyrin repeat domain 52 2 2
MIRT574140 MARVELD1 MARVEL domain containing 1 2 2
MIRT615994 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT628493 ZNF556 zinc finger protein 556 2 2
MIRT633451 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT649054 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649340 HEXA hexosaminidase subunit alpha 2 2
MIRT670226 PTCHD1 patched domain containing 1 2 2
MIRT670666 KIAA1551 KIAA1551 2 2
MIRT671452 CDH7 cadherin 7 2 2
MIRT671729 ZNF451 zinc finger protein 451 2 2
MIRT690285 ZNF154 zinc finger protein 154 2 2
MIRT700575 PRSS22 protease, serine 22 2 2
MIRT701411 NKRF NFKB repressing factor 2 2
MIRT711877 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712082 UNC13A unc-13 homolog A 2 2
MIRT712523 CYTH2 cytohesin 2 2 2
MIRT712751 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT714681 PRX periaxin 2 2
MIRT714718 VPS8 VPS8, CORVET complex subunit 2 2
MIRT717508 HRNR hornerin 2 2
MIRT717650 THBS2 thrombospondin 2 2 2
MIRT719592 PIAS4 protein inhibitor of activated STAT 4 2 2
MIRT720521 PTGR2 prostaglandin reductase 2 2 2
MIRT721295 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT724922 VPS18 VPS18, CORVET/HOPS core subunit 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6787 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6787-5p Dabrafenib 44462760 NSC764134 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-6787-5p Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-6787-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-6787-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6787-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (LCC2)
hsa-miR-6787-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-6787-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-6787-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-6787-5p Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)

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