pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ADCY5   
Synonyms AC5, FDFM
Description adenylate cyclase 5
Transcript NM_183357   
Expression
Putative miRNA Targets on ADCY5
3'UTR of ADCY5
(miRNA target sites are highlighted)
>ADCY5|NM_183357|3'UTR
   1 CAGCTGTTGGCCAATGGTGCCAGGCAGCCTGGCCTCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGG
  81 AAGCCATGCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTGG
 161 GCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAA
 241 GACTCTGCTAGACTGGGTCTGAAGCTTGAGTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGT
 321 GTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGGG
 401 AGAGCCTAGGGGGCCCCAGGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGG
 481 GGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGA
 561 CAGTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTGAGAAA
 641 AATATTTATTAAATAAAACAAAACAAGTTCTCCGTGCCCTTCTTTAGACTATGCTAGTTGTATGCGTGTAAGAGACACAC
 721 AAGCAAACGAGGACGCCACTCGGGGGGAGGGCGGGGATCCCCACTTGTCTTTTTTGTATTTTTTATTTTGTATTATTGAA
 801 AGCCTTGGAGATCTCACAGATAGATATGCCAAATTCTATATTTTGTAAATTCTCTATATTAGAAAACAGCTGTGCACAGC
 881 AGGGCGGGTGTGCTCATTTGTACTGTGTGTATGTCGGTGTATGTACTGGTGTATATGTGTGTGTGTTCATGCTGTGGAAC
 961 TGGTCTCACACAGGATGTGTTTCCCTCATTTCAGATTTGGCAGTTTTGGGTTTTCCAAGGTACCACCAGAGCAGTGGGTG
1041 TGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCAC
1121 ACGTATGTACACACATGCACACACCCTCCTTCCCCTAAGCAAAACGCAGATGGAATAAGAAAACAAAAAGCTGCTTTCCC
1201 ATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTC
1281 AGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAGGCTGGGACG
1361 AGGAAGCCAAGCCTCCCTGGCCTACTCAGTTGGCCAAGGTGCAGGTGGCTCTTCCTGGAGATGTTCACTCAGACTGGGGG
1441 ATGCAATGTGCAGCCTTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGA
1521 GCCCAGCTTTAGAGTCCACAGGGAAAGCTAGCAGGAATTTTGTTTTAGTGGGAGGGGGCAGTTAAACATACCAAGAAAAA
1601 AATACTATTTTTATAACCTATGAGGAAGACATTTGGAAAATGATACTCTAGCACAGAATTCAGTGGAATCCTTAGGGCCC
1681 ATGCCCAAATCTTTCCATTGCTTCTCAGGTTAGAATGATCTTCACCTCCAACATGAGCTTGGAGGTGATGAGGCAGTGGC
1761 TCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCC
1841 CGCACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCT
1921 GCTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCACAGGAGGCCTGCTTTCTTCCAGCTGTTGTTCTCA
2001 AGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTG
2081 AGTTCATCCCATGTTCTCCCATGGTCATGGCTTCCCGGCCCCATGGGGACCCCTCTCCCATCCCAGCAGTGACTGGTGAC
2161 AGTGTGCAGGTGCAGTGCTAGCTCTTCGTTCCCTCTAAAGGGTGTGCACTCTTTTTATTCCTACTCTTGCAAAAACAGAT
2241 ACGATTATGATTTCCCATGGAAATTGAAAAGTCTATTTAAATAATTTAACTATTAAACACTTTCACTGGTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugaCGUCGGAACUGGAGGguc 5'
             |::||||||||||||   
Target 5' ggaGTGGCCTTGACCTCCacc 3'
1473 - 1493 142.00 -26.12
2
miRNA  3' ugACGU-CGGAACUGGAGGGUc 5'
            | ||  || || :|||||| 
Target 5' agTTCATCCCATGTTCTCCCAt 3'
2081 - 2102 139.00 -13.40
3
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            ||:| ||   |||||:|| 
Target 5' ccTGTA-CC---ACCTCTCAc 3'
1797 - 1813 135.00 -15.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1197518 157 ClinVar
COSN30135717 10 COSMIC
COSN30493242 21 COSMIC
COSN31602896 24 COSMIC
COSN27790265 80 COSMIC
COSN14027371 108 COSMIC
COSN9234641 233 COSMIC
COSN22734850 239 COSMIC
COSN28848562 241 COSMIC
COSN7815250 706 COSMIC
COSN24222964 728 COSMIC
COSN29332664 770 COSMIC
COSN15004159 935 COSMIC
COSN7815249 1058 COSMIC
COSN1911639 1126 COSMIC
COSN28197990 1537 COSMIC
COSN15100966 1706 COSMIC
rs13317079 157 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs200853304 4 dbSNP
rs1250264490 6 dbSNP
rs927160563 7 dbSNP
rs552403413 10 dbSNP
rs200585862 11 dbSNP
rs1252424165 12 dbSNP
rs1361838491 14 dbSNP
rs1289925779 15 dbSNP
rs762875580 17 dbSNP
rs1251299646 19 dbSNP
rs775307926 20 dbSNP
rs769595801 21 dbSNP
rs745633381 22 dbSNP
rs370899616 23 dbSNP
rs1470086502 25 dbSNP
rs1323955738 26 dbSNP
rs771123011 28 dbSNP
rs778063732 33 dbSNP
rs368624949 34 dbSNP
rs761621256 35 dbSNP
rs759011923 38 dbSNP
rs1374753032 45 dbSNP
rs753232790 46 dbSNP
rs1460234341 53 dbSNP
rs374888277 59 dbSNP
rs1020698085 60 dbSNP
rs1010204418 61 dbSNP
rs965375655 63 dbSNP
rs185938307 67 dbSNP
rs1026874006 68 dbSNP
rs764102907 70 dbSNP
rs995355921 72 dbSNP
rs961222067 76 dbSNP
rs1019855358 77 dbSNP
rs1015411951 86 dbSNP
rs1007162126 90 dbSNP
rs1245793040 91 dbSNP
rs1206565514 94 dbSNP
rs540565633 97 dbSNP
rs373771340 98 dbSNP
rs1187207983 103 dbSNP
rs1263735722 107 dbSNP
rs562145440 108 dbSNP
rs1207426480 115 dbSNP
rs1187688658 116 dbSNP
rs1050200771 117 dbSNP
rs1304161822 124 dbSNP
rs541922170 131 dbSNP
rs576147323 133 dbSNP
rs1048578857 141 dbSNP
rs1453797255 152 dbSNP
rs13317079 157 dbSNP
rs898946992 165 dbSNP
rs1433612550 166 dbSNP
rs1194780696 169 dbSNP
rs545980092 184 dbSNP
rs1236996396 185 dbSNP
rs577072541 185 dbSNP
rs940320777 188 dbSNP
rs1056632866 193 dbSNP
rs554149046 195 dbSNP
rs753144440 196 dbSNP
rs937284617 197 dbSNP
rs927129355 201 dbSNP
rs145493377 202 dbSNP
rs1207966289 203 dbSNP
rs371898800 203 dbSNP
rs559559310 205 dbSNP
rs969688643 208 dbSNP
rs1168566495 214 dbSNP
rs919572670 219 dbSNP
rs974013169 225 dbSNP
rs545596726 226 dbSNP
rs1361622670 228 dbSNP
rs961274789 234 dbSNP
rs1320421632 235 dbSNP
rs1395880935 239 dbSNP
rs1015880828 241 dbSNP
rs913277465 246 dbSNP
rs955658583 247 dbSNP
rs1309435887 250 dbSNP
rs1327079827 255 dbSNP
rs554572680 259 dbSNP
rs1273686578 269 dbSNP
rs1211559636 272 dbSNP
rs996870244 272 dbSNP
rs560723191 273 dbSNP
rs903893932 277 dbSNP
rs1255050444 279 dbSNP
rs1043701107 281 dbSNP
rs1179607242 281 dbSNP
rs1009813743 282 dbSNP
rs537894287 290 dbSNP
rs568983438 299 dbSNP
rs1019654686 300 dbSNP
rs1057041882 308 dbSNP
rs552341724 310 dbSNP
rs985691353 312 dbSNP
rs1409266224 313 dbSNP
rs1294030213 316 dbSNP
rs1336854919 326 dbSNP
rs928391215 326 dbSNP
rs1289078809 327 dbSNP
rs954316089 329 dbSNP
rs760025829 330 dbSNP
rs1249132561 344 dbSNP
rs948436374 350 dbSNP
rs995652998 354 dbSNP
rs149370931 356 dbSNP
rs373973474 356 dbSNP
rs1259071944 357 dbSNP
rs1340027391 358 dbSNP
rs532342457 361 dbSNP
rs1310917746 362 dbSNP
rs897315961 369 dbSNP
rs1356218550 370 dbSNP
rs1014650250 371 dbSNP
rs139935310 372 dbSNP
rs908429790 374 dbSNP
rs987058461 375 dbSNP
rs1445921986 376 dbSNP
rs1399273838 380 dbSNP
rs751624035 381 dbSNP
rs181346430 386 dbSNP
rs530015326 387 dbSNP
rs77605511 389 dbSNP
rs1211080718 402 dbSNP
rs1282023348 409 dbSNP
rs75411085 411 dbSNP
rs905747418 412 dbSNP
rs1440154313 414 dbSNP
rs572192721 414 dbSNP
rs975504340 420 dbSNP
rs1476051848 421 dbSNP
rs766415181 422 dbSNP
rs913070678 426 dbSNP
rs1449256749 428 dbSNP
rs1174424519 432 dbSNP
rs1377537454 438 dbSNP
rs988881857 439 dbSNP
rs763215204 442 dbSNP
rs912564773 448 dbSNP
rs1432876111 452 dbSNP
rs1295326493 459 dbSNP
rs531637441 460 dbSNP
rs1196144591 461 dbSNP
rs1355438535 465 dbSNP
rs189917659 473 dbSNP
rs1235324630 476 dbSNP
rs1342504649 479 dbSNP
rs1035255098 488 dbSNP
rs771769448 492 dbSNP
rs4499546 497 dbSNP
rs1448073292 507 dbSNP
rs1211063909 514 dbSNP
rs773604349 514 dbSNP
rs1464698315 518 dbSNP
rs1004184556 528 dbSNP
rs1379555790 530 dbSNP
rs1338042011 539 dbSNP
rs1408736946 542 dbSNP
rs1402524529 543 dbSNP
rs1330218886 549 dbSNP
rs185899533 551 dbSNP
rs948488771 556 dbSNP
rs1328387760 558 dbSNP
rs898206917 559 dbSNP
rs1038057075 561 dbSNP
rs1279789424 564 dbSNP
rs866985465 572 dbSNP
rs577009087 578 dbSNP
rs1266730563 582 dbSNP
rs1329119943 589 dbSNP
rs1269989331 592 dbSNP
rs140256542 592 dbSNP
rs201196790 592 dbSNP
rs961536763 593 dbSNP
rs1450251957 597 dbSNP
rs1157688404 600 dbSNP
rs1198338073 606 dbSNP
rs1016203214 611 dbSNP
rs1468217617 612 dbSNP
rs1365441949 623 dbSNP
rs560754785 625 dbSNP
rs1004588985 631 dbSNP
rs1461962774 632 dbSNP
rs1166814154 633 dbSNP
rs986766429 635 dbSNP
rs1386014106 643 dbSNP
rs1329070694 646 dbSNP
rs933893839 647 dbSNP
rs1182485740 651 dbSNP
rs1287235684 651 dbSNP
rs1350392838 653 dbSNP
rs1234372347 657 dbSNP
rs895605860 659 dbSNP
rs921146937 659 dbSNP
rs1035411124 660 dbSNP
rs1001119614 662 dbSNP
rs1450997123 663 dbSNP
rs1209640502 665 dbSNP
rs374490987 667 dbSNP
rs564274694 667 dbSNP
rs968113476 667 dbSNP
rs905545305 668 dbSNP
rs1042951034 670 dbSNP
rs376471015 673 dbSNP
rs891607705 674 dbSNP
rs956754804 678 dbSNP
rs1469021818 685 dbSNP
rs747011717 685 dbSNP
rs1457179612 686 dbSNP
rs1267812462 689 dbSNP
rs1168334767 691 dbSNP
rs776350903 692 dbSNP
rs944095113 705 dbSNP
rs181673182 706 dbSNP
rs1355462019 712 dbSNP
rs1352998225 714 dbSNP
rs912615800 714 dbSNP
rs985542568 716 dbSNP
rs1003830489 720 dbSNP
rs779821631 727 dbSNP
rs932644209 728 dbSNP
rs919931935 734 dbSNP
rs974336553 735 dbSNP
rs961971811 737 dbSNP
rs1274197291 741 dbSNP
rs1486019584 742 dbSNP
rs544276828 747 dbSNP
rs1253974321 748 dbSNP
rs992254334 748 dbSNP
rs994977893 748 dbSNP
rs1038152037 752 dbSNP
rs939754911 753 dbSNP
rs886812392 754 dbSNP
rs72962487 760 dbSNP
rs1398421180 761 dbSNP
rs775044448 767 dbSNP
rs1001253664 769 dbSNP
rs1158665022 771 dbSNP
rs1477621349 772 dbSNP
rs1321824924 777 dbSNP
rs114255349 783 dbSNP
rs1297084459 785 dbSNP
rs975229029 785 dbSNP
rs1348936256 789 dbSNP
rs1235480435 790 dbSNP
rs1195259208 795 dbSNP
rs1254410497 795 dbSNP
rs946527539 795 dbSNP
rs915057165 796 dbSNP
rs988212870 801 dbSNP
rs1463339206 810 dbSNP
rs1187750679 811 dbSNP
rs796425782 812 dbSNP
rs1434610236 816 dbSNP
rs1173330169 819 dbSNP
rs956996138 820 dbSNP
rs749313344 822 dbSNP
rs551584187 823 dbSNP
rs1247620077 825 dbSNP
rs1320356443 827 dbSNP
rs1433322716 827 dbSNP
rs150183546 827 dbSNP
rs370822558 827 dbSNP
rs1368571019 828 dbSNP
rs575357373 829 dbSNP
rs969672931 834 dbSNP
rs1023871163 839 dbSNP
rs1269919851 840 dbSNP
rs1448990305 842 dbSNP
rs1327046440 844 dbSNP
rs1207872923 845 dbSNP
rs1253453311 852 dbSNP
rs1011489022 856 dbSNP
rs150517013 856 dbSNP
rs770158486 856 dbSNP
rs891741760 857 dbSNP
rs1053031694 859 dbSNP
rs1004005604 860 dbSNP
rs886819614 862 dbSNP
rs1350761855 863 dbSNP
rs1008024063 868 dbSNP
rs1459793625 869 dbSNP
rs142258325 874 dbSNP
rs1199955762 877 dbSNP
rs538771799 885 dbSNP
rs932754598 886 dbSNP
rs1290363759 887 dbSNP
rs899778019 890 dbSNP
rs1039620647 892 dbSNP
rs1283168581 907 dbSNP
rs1323245022 911 dbSNP
rs147366266 911 dbSNP
rs1264475434 914 dbSNP
rs1480780342 915 dbSNP
rs566511892 915 dbSNP
rs188923840 916 dbSNP
rs1471979279 925 dbSNP
rs1415180575 926 dbSNP
rs559334077 926 dbSNP
rs536108214 930 dbSNP
rs940046981 931 dbSNP
rs1349512933 932 dbSNP
rs115947283 935 dbSNP
rs1327840480 937 dbSNP
rs935430544 939 dbSNP
rs573459332 942 dbSNP
rs550511849 945 dbSNP
rs1226370896 947 dbSNP
rs1311828301 947 dbSNP
rs926823887 947 dbSNP
rs969403114 947 dbSNP
rs1342420149 954 dbSNP
rs916573969 963 dbSNP
rs1413476013 971 dbSNP
rs1373541418 977 dbSNP
rs1175497031 978 dbSNP
rs1482412902 978 dbSNP
rs531577920 979 dbSNP
rs1435073763 981 dbSNP
rs562578970 981 dbSNP
rs552220618 982 dbSNP
rs145899979 983 dbSNP
rs532493484 984 dbSNP
rs1184589111 986 dbSNP
rs1005428383 987 dbSNP
rs1450487265 988 dbSNP
rs951176339 988 dbSNP
rs1388574305 992 dbSNP
rs1029802574 1015 dbSNP
rs1242920351 1023 dbSNP
rs1334982808 1028 dbSNP
rs1360829471 1032 dbSNP
rs1186928168 1035 dbSNP
rs1445811890 1036 dbSNP
rs748505785 1040 dbSNP
rs1302209374 1041 dbSNP
rs1283050580 1042 dbSNP
rs1212171784 1044 dbSNP
rs1342103739 1046 dbSNP
rs1271251132 1049 dbSNP
rs979858791 1050 dbSNP
rs1230363082 1052 dbSNP
rs970252225 1054 dbSNP
rs1294913657 1056 dbSNP
rs868391682 1058 dbSNP
rs1341065649 1059 dbSNP
rs1219300104 1061 dbSNP
rs1216690445 1065 dbSNP
rs1021282589 1066 dbSNP
rs1280198434 1070 dbSNP
rs185303564 1074 dbSNP
rs1270466772 1077 dbSNP
rs1446619104 1080 dbSNP
rs1039336190 1085 dbSNP
rs1353066033 1092 dbSNP
rs955734815 1093 dbSNP
rs1031567821 1094 dbSNP
rs1465592278 1096 dbSNP
rs1314211454 1101 dbSNP
rs142422847 1107 dbSNP
rs893683034 1109 dbSNP
rs1052282470 1110 dbSNP
rs935129420 1114 dbSNP
rs1412843039 1115 dbSNP
rs1175208136 1116 dbSNP
rs1167976968 1117 dbSNP
rs927802812 1117 dbSNP
rs9820928 1118 dbSNP
rs574974042 1120 dbSNP
rs1420478613 1122 dbSNP
rs148486667 1123 dbSNP
rs544947803 1126 dbSNP
rs9858285 1128 dbSNP
rs1263039558 1130 dbSNP
rs908092205 1136 dbSNP
rs1246640588 1140 dbSNP
rs983657671 1141 dbSNP
rs1199771862 1147 dbSNP
rs955068908 1150 dbSNP
rs1030485646 1155 dbSNP
rs1188760959 1156 dbSNP
rs1198835255 1157 dbSNP
rs752025485 1166 dbSNP
rs563192956 1173 dbSNP
rs553696983 1184 dbSNP
rs1387549023 1185 dbSNP
rs749888481 1188 dbSNP
rs1438801898 1195 dbSNP
rs1325059751 1208 dbSNP
rs540082013 1209 dbSNP
rs535568307 1210 dbSNP
rs551604074 1211 dbSNP
rs1288506756 1214 dbSNP
rs7644737 1219 dbSNP
rs758486233 1221 dbSNP
rs1233369672 1235 dbSNP
rs1372522187 1240 dbSNP
rs1350365973 1243 dbSNP
rs908563006 1244 dbSNP
rs999437465 1245 dbSNP
rs538398061 1252 dbSNP
rs1450152011 1255 dbSNP
rs1056628405 1257 dbSNP
rs376675178 1260 dbSNP
rs939630163 1260 dbSNP
rs906395306 1262 dbSNP
rs1179872862 1272 dbSNP
rs926791293 1275 dbSNP
rs1363181235 1284 dbSNP
rs538707403 1285 dbSNP
rs1322675608 1288 dbSNP
rs946912608 1289 dbSNP
rs750609453 1290 dbSNP
rs989933847 1291 dbSNP
rs1420299408 1296 dbSNP
rs144644853 1297 dbSNP
rs1308278298 1303 dbSNP
rs1165737972 1304 dbSNP
rs1472336688 1305 dbSNP
rs184801589 1306 dbSNP
rs879426464 1307 dbSNP
rs955312697 1308 dbSNP
rs941987605 1320 dbSNP
rs1212229403 1321 dbSNP
rs1466813782 1323 dbSNP
rs1274736732 1355 dbSNP
rs1213758692 1356 dbSNP
rs1028250258 1359 dbSNP
rs984136800 1360 dbSNP
rs1171881318 1363 dbSNP
rs372606417 1378 dbSNP
rs1315865077 1385 dbSNP
rs1304747212 1387 dbSNP
rs933579533 1390 dbSNP
rs182325353 1391 dbSNP
rs189238087 1392 dbSNP
rs386665325 1393 dbSNP
rs1443786025 1399 dbSNP
rs557122536 1400 dbSNP
rs1391659502 1402 dbSNP
rs1427223541 1417 dbSNP
rs1297164763 1424 dbSNP
rs149318745 1433 dbSNP
rs1397059937 1437 dbSNP
rs989122849 1438 dbSNP
rs1336720453 1442 dbSNP
rs568884482 1447 dbSNP
rs1339034217 1448 dbSNP
rs887092253 1451 dbSNP
rs1298581389 1452 dbSNP
rs1056431389 1453 dbSNP
rs552157563 1455 dbSNP
rs939598930 1466 dbSNP
rs569522509 1467 dbSNP
rs1250888843 1469 dbSNP
rs1453104422 1475 dbSNP
rs999891595 1487 dbSNP
rs906412817 1493 dbSNP
rs1045323053 1494 dbSNP
rs946850913 1503 dbSNP
rs915423749 1509 dbSNP
rs1447343071 1510 dbSNP
rs1012059052 1515 dbSNP
rs1377629958 1518 dbSNP
rs1467161106 1519 dbSNP
rs1174777696 1539 dbSNP
rs990290222 1540 dbSNP
rs1192147157 1541 dbSNP
rs934419894 1545 dbSNP
rs1367607078 1564 dbSNP
rs1295136871 1566 dbSNP
rs1380689292 1566 dbSNP
rs1037814668 1567 dbSNP
rs895250118 1567 dbSNP
rs1254470548 1574 dbSNP
rs532460792 1579 dbSNP
rs942079116 1579 dbSNP
rs924269601 1581 dbSNP
rs560626648 1585 dbSNP
rs1047720213 1603 dbSNP
rs1209104120 1603 dbSNP
rs955029315 1606 dbSNP
rs1463379092 1611 dbSNP
rs1185529916 1613 dbSNP
rs1267636894 1620 dbSNP
rs1434373918 1626 dbSNP
rs184350309 1627 dbSNP
rs1469793027 1631 dbSNP
rs975372028 1632 dbSNP
rs933568706 1639 dbSNP
rs923511723 1644 dbSNP
rs1039188962 1645 dbSNP
rs1217312407 1645 dbSNP
rs1288463742 1646 dbSNP
rs914731317 1648 dbSNP
rs1281513567 1662 dbSNP
rs1317436027 1663 dbSNP
rs1290169808 1673 dbSNP
rs1326754097 1674 dbSNP
rs192717414 1676 dbSNP
rs989225784 1677 dbSNP
rs187024714 1678 dbSNP
rs184146224 1680 dbSNP
rs1267487937 1688 dbSNP
rs1472636727 1691 dbSNP
rs1016792331 1694 dbSNP
rs1183486377 1696 dbSNP
rs1303915878 1702 dbSNP
rs544883593 1713 dbSNP
rs1417686016 1718 dbSNP
rs149655052 1724 dbSNP
rs1350670645 1725 dbSNP
rs923607569 1731 dbSNP
rs1360153280 1734 dbSNP
rs977751487 1742 dbSNP
rs1004253139 1745 dbSNP
rs1454432682 1747 dbSNP
rs1375363447 1748 dbSNP
rs971065892 1750 dbSNP
rs1371144730 1752 dbSNP
rs1172372507 1754 dbSNP
rs887228038 1762 dbSNP
rs1396030388 1766 dbSNP
rs531251819 1769 dbSNP
rs1188340194 1773 dbSNP
rs1427483213 1780 dbSNP
rs1290623548 1783 dbSNP
rs537167153 1785 dbSNP
rs545028884 1800 dbSNP
rs1206746570 1813 dbSNP
rs1254559637 1814 dbSNP
rs1479974958 1818 dbSNP
rs1177145970 1821 dbSNP
rs1187745691 1825 dbSNP
rs1425956241 1827 dbSNP
rs757538537 1830 dbSNP
rs1161849523 1831 dbSNP
rs1485936550 1832 dbSNP
rs1256679406 1833 dbSNP
rs568114967 1841 dbSNP
rs1352677009 1842 dbSNP
rs1441318898 1842 dbSNP
rs1303363181 1847 dbSNP
rs1045695540 1850 dbSNP
rs139590302 1853 dbSNP
rs771512527 1854 dbSNP
rs1342488172 1861 dbSNP
rs553014278 1862 dbSNP
rs1306415455 1865 dbSNP
rs1235182922 1870 dbSNP
rs934388720 1871 dbSNP
rs1048197703 1873 dbSNP
rs375691439 1875 dbSNP
rs997496117 1876 dbSNP
rs1450387172 1877 dbSNP
rs1305980257 1887 dbSNP
rs573748198 1887 dbSNP
rs1050851160 1890 dbSNP
rs902109641 1897 dbSNP
rs745368941 1899 dbSNP
rs1298078141 1901 dbSNP
rs933618215 1905 dbSNP
rs1039283692 1912 dbSNP
rs1192569104 1913 dbSNP
rs1382830783 1916 dbSNP
rs920970378 1933 dbSNP
rs1436738201 1939 dbSNP
rs866433407 1941 dbSNP
rs1354949304 1949 dbSNP
rs943617784 1955 dbSNP
rs1360601239 1958 dbSNP
rs547887822 1959 dbSNP
rs549652838 1959 dbSNP
rs962698321 1960 dbSNP
rs6784930 1961 dbSNP
rs145986442 1962 dbSNP
rs1376595161 1966 dbSNP
rs759003230 1966 dbSNP
rs1240605267 1967 dbSNP
rs1475114845 1971 dbSNP
rs951218910 1973 dbSNP
rs557671604 1974 dbSNP
rs1427179750 1979 dbSNP
rs1167691706 1986 dbSNP
rs76135430 1992 dbSNP
rs1175619253 1997 dbSNP
rs923685260 1997 dbSNP
rs1003595364 2002 dbSNP
rs1389048414 2003 dbSNP
rs1370963108 2008 dbSNP
rs1172137635 2011 dbSNP
rs978180355 2016 dbSNP
rs1344278396 2020 dbSNP
rs969778494 2021 dbSNP
rs566780333 2022 dbSNP
rs1185181973 2025 dbSNP
rs547054063 2026 dbSNP
rs1207315350 2029 dbSNP
rs1258221445 2035 dbSNP
rs1282389996 2036 dbSNP
rs770537664 2045 dbSNP
rs990768584 2046 dbSNP
rs894089985 2049 dbSNP
rs1479566918 2053 dbSNP
rs1412678164 2054 dbSNP
rs776404904 2054 dbSNP
rs1052692333 2062 dbSNP
rs999673146 2066 dbSNP
rs1156663294 2071 dbSNP
rs13322080 2076 dbSNP
rs113236387 2078 dbSNP
rs1325119127 2081 dbSNP
rs1334471698 2082 dbSNP
rs1006018708 2091 dbSNP
rs933752699 2102 dbSNP
rs1351693690 2104 dbSNP
rs80312230 2109 dbSNP
rs1039406087 2114 dbSNP
rs1350431584 2116 dbSNP
rs941032206 2117 dbSNP
rs1026372994 2124 dbSNP
rs1489872980 2127 dbSNP
rs1390000932 2131 dbSNP
rs909760432 2135 dbSNP
rs531186924 2139 dbSNP
rs951189566 2142 dbSNP
rs1299120279 2153 dbSNP
rs1465769011 2156 dbSNP
rs1179589453 2163 dbSNP
rs1362950919 2169 dbSNP
rs927829358 2170 dbSNP
rs1165042455 2185 dbSNP
rs1383042440 2187 dbSNP
rs982141479 2188 dbSNP
rs113985515 2204 dbSNP
rs1168738403 2207 dbSNP
rs192261002 2208 dbSNP
rs969537021 2211 dbSNP
rs561450800 2220 dbSNP
rs1181052717 2221 dbSNP
rs142457222 2229 dbSNP
rs1010871463 2231 dbSNP
rs760379374 2241 dbSNP
rs528077852 2242 dbSNP
rs1357634816 2243 dbSNP
rs1468199122 2261 dbSNP
rs559103938 2264 dbSNP
rs1275359101 2265 dbSNP
rs1341578472 2271 dbSNP
rs1031231427 2275 dbSNP
rs565882366 2280 dbSNP
rs755324719 2283 dbSNP
rs890612000 2286 dbSNP
rs1054565666 2287 dbSNP
rs770470582 2290 dbSNP
rs1030544006 2291 dbSNP
rs998335959 2300 dbSNP
rs1443699798 2301 dbSNP
rs1188805886 2304 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000462833.1 | 3UTR | UGCGGAAAGGGAGUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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