pre-miRNA Information
pre-miRNA hsa-mir-4753   
Genomic Coordinates chr1: 235190034 - 235190116
Description Homo sapiens miR-4753 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4753-5p
Sequence 10| CAAGGCCAAAGGAAGAGAACAG |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs547986869 3 dbSNP
rs1007787337 7 dbSNP
rs1224263160 12 dbSNP
rs1256249071 13 dbSNP
rs1484015538 14 dbSNP
rs535678819 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ADCY5   
Synonyms AC5, FDFM
Description adenylate cyclase 5
Transcript NM_183357   
Expression
Putative miRNA Targets on ADCY5
3'UTR of ADCY5
(miRNA target sites are highlighted)
>ADCY5|NM_183357|3'UTR
   1 CAGCTGTTGGCCAATGGTGCCAGGCAGCCTGGCCTCCAGAGGCATGGAAGCAGCTTCTCTGTGTGCCGGGGGTGGCGGGG
  81 AAGCCATGCTCCAGCCCGCAGGGCTGCGCTGCTGAGATTTTCCACTTGGACTCCAGAGCAGCTTCTGCCTTTGCTGGTGG
 161 GCAGCGGCCTCTGTCCCAGGCCCCGGGGTGCCAGCGTCCTGCGAGCACCCAGCTGACCAAAGATGTTTCCCTCTGTAGAA
 241 GACTCTGCTAGACTGGGTCTGAAGCTTGAGTTTTCTAACAGGTGCTGCTGCACAGGTGGAAAGGAGCCGTGGGAATGTGT
 321 GTGTGGCACGGCCCAGACAAGGGCAGGGCTGAGGGGCCTCCGACTCAGCTGGGGGTAGACGGGCTCGAATGTGGCCTGGG
 401 AGAGCCTAGGGGGCCCCAGGGGTCTGCTTTTCTATGTGAGCCTTTAAACTTCAGACAGGCCACCACCCTGCACCTGCAGG
 481 GGCTTTGGCACAGGAGTGCTGGCTTTGGAGGGACTGTGGCCTTCATCGTGGTCCTCTGCCCACACCTCCACGCACACAGA
 561 CAGTGCCCTAGGAGGGAAACAGAACTAATTACGAGGGGGAGGCAAGAGGACGCCAAGCAAGGAGTGGTGATTCTGAGAAA
 641 AATATTTATTAAATAAAACAAAACAAGTTCTCCGTGCCCTTCTTTAGACTATGCTAGTTGTATGCGTGTAAGAGACACAC
 721 AAGCAAACGAGGACGCCACTCGGGGGGAGGGCGGGGATCCCCACTTGTCTTTTTTGTATTTTTTATTTTGTATTATTGAA
 801 AGCCTTGGAGATCTCACAGATAGATATGCCAAATTCTATATTTTGTAAATTCTCTATATTAGAAAACAGCTGTGCACAGC
 881 AGGGCGGGTGTGCTCATTTGTACTGTGTGTATGTCGGTGTATGTACTGGTGTATATGTGTGTGTGTTCATGCTGTGGAAC
 961 TGGTCTCACACAGGATGTGTTTCCCTCATTTCAGATTTGGCAGTTTTGGGTTTTCCAAGGTACCACCAGAGCAGTGGGTG
1041 TGTGCTTTTGGGGTACCATATGCTCAGATTAAGTAGGAGGATGCATGGACACACTGCCCCATCTTTTCTGACACACGCAC
1121 ACGTATGTACACACATGCACACACCCTCCTTCCCCTAAGCAAAACGCAGATGGAATAAGAAAACAAAAAGCTGCTTTCCC
1201 ATCCCAGGCCGAGCTGGAACCAAGGGAAGCAATCTCATCCTGCGACAGGCAGTGTGGTGCCCTCCACACCCTGAGATTTC
1281 AGACGTTTGCGGCTTACAGAGGCAGCGCCCACAGATTCCAGAGTGCTTACAGAAGGCCAGGTGCTTTGCAGGCTGGGACG
1361 AGGAAGCCAAGCCTCCCTGGCCTACTCAGTTGGCCAAGGTGCAGGTGGCTCTTCCTGGAGATGTTCACTCAGACTGGGGG
1441 ATGCAATGTGCAGCCTTCAGGTTTGCGGAAAGGGAGTGGCCTTGACCTCCACCGGCAAACCAGGCAGAGGAATGGGTAGA
1521 GCCCAGCTTTAGAGTCCACAGGGAAAGCTAGCAGGAATTTTGTTTTAGTGGGAGGGGGCAGTTAAACATACCAAGAAAAA
1601 AATACTATTTTTATAACCTATGAGGAAGACATTTGGAAAATGATACTCTAGCACAGAATTCAGTGGAATCCTTAGGGCCC
1681 ATGCCCAAATCTTTCCATTGCTTCTCAGGTTAGAATGATCTTCACCTCCAACATGAGCTTGGAGGTGATGAGGCAGTGGC
1761 TCTGTGCCAGCTGCCACAATGTGACTTTGATGTCCACCTGTACCACCTCTCACTGGGCTCTAGCACCACCCTCCCCTCCC
1841 CGCACACCAACTGAACACAGCTCTGAGAAGCAAAGTGTGTGGACCCAAAACTGCCAAGCCTGAGTCTGTCCCGTGCTTCT
1921 GCTGCTCCATCCTTTGAGTTCTGCATTGCCATCCTGACGTCGGCCACAGGAGGCCTGCTTTCTTCCAGCTGTTGTTCTCA
2001 AGTTCCCTGCCCCTCCACATCGCCCGCCAGTGGTGTTGGGTTTTCGTTCTGCTTCCAACCTGAGTAAAGTGTGTGTGCTG
2081 AGTTCATCCCATGTTCTCCCATGGTCATGGCTTCCCGGCCCCATGGGGACCCCTCTCCCATCCCAGCAGTGACTGGTGAC
2161 AGTGTGCAGGTGCAGTGCTAGCTCTTCGTTCCCTCTAAAGGGTGTGCACTCTTTTTATTCCTACTCTTGCAAAAACAGAT
2241 ACGATTATGATTTCCCATGGAAATTGAAAAGTCTATTTAAATAATTTAACTATTAAACACTTTCACTGGTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaCAAGA--GAAG-------GAAACCGGAAc 5'
            || ||  |||:       || ||||||| 
Target 5' gaGTGCTGGCTTTGGAGGGACTGTGGCCTTc 3'
494 - 524 150.00 -14.50
2
miRNA  3' gacaagagaaggaaACCGGAAc 5'
                        ||||||| 
Target 5' ttgcggaaagggagTGGCCTTg 3'
1463 - 1484 140.00 -12.90
3
miRNA  3' gacAAGAGAAGG-AAAC-CGGAAc 5'
             | ||:|||: | || ||||| 
Target 5' gtcTGCTTTTCTATGTGAGCCTTt 3'
422 - 445 131.00 -13.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1197518 157 ClinVar
COSN30135717 10 COSMIC
COSN30493242 21 COSMIC
COSN31602896 24 COSMIC
COSN27790265 80 COSMIC
COSN14027371 108 COSMIC
COSN9234641 233 COSMIC
COSN22734850 239 COSMIC
COSN28848562 241 COSMIC
COSN7815250 706 COSMIC
COSN24222964 728 COSMIC
COSN29332664 770 COSMIC
COSN15004159 935 COSMIC
COSN7815249 1058 COSMIC
COSN1911639 1126 COSMIC
COSN28197990 1537 COSMIC
COSN15100966 1706 COSMIC
rs13317079 157 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs200853304 4 dbSNP
rs1250264490 6 dbSNP
rs927160563 7 dbSNP
rs552403413 10 dbSNP
rs200585862 11 dbSNP
rs1252424165 12 dbSNP
rs1361838491 14 dbSNP
rs1289925779 15 dbSNP
rs762875580 17 dbSNP
rs1251299646 19 dbSNP
rs775307926 20 dbSNP
rs769595801 21 dbSNP
rs745633381 22 dbSNP
rs370899616 23 dbSNP
rs1470086502 25 dbSNP
rs1323955738 26 dbSNP
rs771123011 28 dbSNP
rs778063732 33 dbSNP
rs368624949 34 dbSNP
rs761621256 35 dbSNP
rs759011923 38 dbSNP
rs1374753032 45 dbSNP
rs753232790 46 dbSNP
rs1460234341 53 dbSNP
rs374888277 59 dbSNP
rs1020698085 60 dbSNP
rs1010204418 61 dbSNP
rs965375655 63 dbSNP
rs185938307 67 dbSNP
rs1026874006 68 dbSNP
rs764102907 70 dbSNP
rs995355921 72 dbSNP
rs961222067 76 dbSNP
rs1019855358 77 dbSNP
rs1015411951 86 dbSNP
rs1007162126 90 dbSNP
rs1245793040 91 dbSNP
rs1206565514 94 dbSNP
rs540565633 97 dbSNP
rs373771340 98 dbSNP
rs1187207983 103 dbSNP
rs1263735722 107 dbSNP
rs562145440 108 dbSNP
rs1207426480 115 dbSNP
rs1187688658 116 dbSNP
rs1050200771 117 dbSNP
rs1304161822 124 dbSNP
rs541922170 131 dbSNP
rs576147323 133 dbSNP
rs1048578857 141 dbSNP
rs1453797255 152 dbSNP
rs13317079 157 dbSNP
rs898946992 165 dbSNP
rs1433612550 166 dbSNP
rs1194780696 169 dbSNP
rs545980092 184 dbSNP
rs1236996396 185 dbSNP
rs577072541 185 dbSNP
rs940320777 188 dbSNP
rs1056632866 193 dbSNP
rs554149046 195 dbSNP
rs753144440 196 dbSNP
rs937284617 197 dbSNP
rs927129355 201 dbSNP
rs145493377 202 dbSNP
rs1207966289 203 dbSNP
rs371898800 203 dbSNP
rs559559310 205 dbSNP
rs969688643 208 dbSNP
rs1168566495 214 dbSNP
rs919572670 219 dbSNP
rs974013169 225 dbSNP
rs545596726 226 dbSNP
rs1361622670 228 dbSNP
rs961274789 234 dbSNP
rs1320421632 235 dbSNP
rs1395880935 239 dbSNP
rs1015880828 241 dbSNP
rs913277465 246 dbSNP
rs955658583 247 dbSNP
rs1309435887 250 dbSNP
rs1327079827 255 dbSNP
rs554572680 259 dbSNP
rs1273686578 269 dbSNP
rs1211559636 272 dbSNP
rs996870244 272 dbSNP
rs560723191 273 dbSNP
rs903893932 277 dbSNP
rs1255050444 279 dbSNP
rs1043701107 281 dbSNP
rs1179607242 281 dbSNP
rs1009813743 282 dbSNP
rs537894287 290 dbSNP
rs568983438 299 dbSNP
rs1019654686 300 dbSNP
rs1057041882 308 dbSNP
rs552341724 310 dbSNP
rs985691353 312 dbSNP
rs1409266224 313 dbSNP
rs1294030213 316 dbSNP
rs1336854919 326 dbSNP
rs928391215 326 dbSNP
rs1289078809 327 dbSNP
rs954316089 329 dbSNP
rs760025829 330 dbSNP
rs1249132561 344 dbSNP
rs948436374 350 dbSNP
rs995652998 354 dbSNP
rs149370931 356 dbSNP
rs373973474 356 dbSNP
rs1259071944 357 dbSNP
rs1340027391 358 dbSNP
rs532342457 361 dbSNP
rs1310917746 362 dbSNP
rs897315961 369 dbSNP
rs1356218550 370 dbSNP
rs1014650250 371 dbSNP
rs139935310 372 dbSNP
rs908429790 374 dbSNP
rs987058461 375 dbSNP
rs1445921986 376 dbSNP
rs1399273838 380 dbSNP
rs751624035 381 dbSNP
rs181346430 386 dbSNP
rs530015326 387 dbSNP
rs77605511 389 dbSNP
rs1211080718 402 dbSNP
rs1282023348 409 dbSNP
rs75411085 411 dbSNP
rs905747418 412 dbSNP
rs1440154313 414 dbSNP
rs572192721 414 dbSNP
rs975504340 420 dbSNP
rs1476051848 421 dbSNP
rs766415181 422 dbSNP
rs913070678 426 dbSNP
rs1449256749 428 dbSNP
rs1174424519 432 dbSNP
rs1377537454 438 dbSNP
rs988881857 439 dbSNP
rs763215204 442 dbSNP
rs912564773 448 dbSNP
rs1432876111 452 dbSNP
rs1295326493 459 dbSNP
rs531637441 460 dbSNP
rs1196144591 461 dbSNP
rs1355438535 465 dbSNP
rs189917659 473 dbSNP
rs1235324630 476 dbSNP
rs1342504649 479 dbSNP
rs1035255098 488 dbSNP
rs771769448 492 dbSNP
rs4499546 497 dbSNP
rs1448073292 507 dbSNP
rs1211063909 514 dbSNP
rs773604349 514 dbSNP
rs1464698315 518 dbSNP
rs1004184556 528 dbSNP
rs1379555790 530 dbSNP
rs1338042011 539 dbSNP
rs1408736946 542 dbSNP
rs1402524529 543 dbSNP
rs1330218886 549 dbSNP
rs185899533 551 dbSNP
rs948488771 556 dbSNP
rs1328387760 558 dbSNP
rs898206917 559 dbSNP
rs1038057075 561 dbSNP
rs1279789424 564 dbSNP
rs866985465 572 dbSNP
rs577009087 578 dbSNP
rs1266730563 582 dbSNP
rs1329119943 589 dbSNP
rs1269989331 592 dbSNP
rs140256542 592 dbSNP
rs201196790 592 dbSNP
rs961536763 593 dbSNP
rs1450251957 597 dbSNP
rs1157688404 600 dbSNP
rs1198338073 606 dbSNP
rs1016203214 611 dbSNP
rs1468217617 612 dbSNP
rs1365441949 623 dbSNP
rs560754785 625 dbSNP
rs1004588985 631 dbSNP
rs1461962774 632 dbSNP
rs1166814154 633 dbSNP
rs986766429 635 dbSNP
rs1386014106 643 dbSNP
rs1329070694 646 dbSNP
rs933893839 647 dbSNP
rs1182485740 651 dbSNP
rs1287235684 651 dbSNP
rs1350392838 653 dbSNP
rs1234372347 657 dbSNP
rs895605860 659 dbSNP
rs921146937 659 dbSNP
rs1035411124 660 dbSNP
rs1001119614 662 dbSNP
rs1450997123 663 dbSNP
rs1209640502 665 dbSNP
rs374490987 667 dbSNP
rs564274694 667 dbSNP
rs968113476 667 dbSNP
rs905545305 668 dbSNP
rs1042951034 670 dbSNP
rs376471015 673 dbSNP
rs891607705 674 dbSNP
rs956754804 678 dbSNP
rs1469021818 685 dbSNP
rs747011717 685 dbSNP
rs1457179612 686 dbSNP
rs1267812462 689 dbSNP
rs1168334767 691 dbSNP
rs776350903 692 dbSNP
rs944095113 705 dbSNP
rs181673182 706 dbSNP
rs1355462019 712 dbSNP
rs1352998225 714 dbSNP
rs912615800 714 dbSNP
rs985542568 716 dbSNP
rs1003830489 720 dbSNP
rs779821631 727 dbSNP
rs932644209 728 dbSNP
rs919931935 734 dbSNP
rs974336553 735 dbSNP
rs961971811 737 dbSNP
rs1274197291 741 dbSNP
rs1486019584 742 dbSNP
rs544276828 747 dbSNP
rs1253974321 748 dbSNP
rs992254334 748 dbSNP
rs994977893 748 dbSNP
rs1038152037 752 dbSNP
rs939754911 753 dbSNP
rs886812392 754 dbSNP
rs72962487 760 dbSNP
rs1398421180 761 dbSNP
rs775044448 767 dbSNP
rs1001253664 769 dbSNP
rs1158665022 771 dbSNP
rs1477621349 772 dbSNP
rs1321824924 777 dbSNP
rs114255349 783 dbSNP
rs1297084459 785 dbSNP
rs975229029 785 dbSNP
rs1348936256 789 dbSNP
rs1235480435 790 dbSNP
rs1195259208 795 dbSNP
rs1254410497 795 dbSNP
rs946527539 795 dbSNP
rs915057165 796 dbSNP
rs988212870 801 dbSNP
rs1463339206 810 dbSNP
rs1187750679 811 dbSNP
rs796425782 812 dbSNP
rs1434610236 816 dbSNP
rs1173330169 819 dbSNP
rs956996138 820 dbSNP
rs749313344 822 dbSNP
rs551584187 823 dbSNP
rs1247620077 825 dbSNP
rs1320356443 827 dbSNP
rs1433322716 827 dbSNP
rs150183546 827 dbSNP
rs370822558 827 dbSNP
rs1368571019 828 dbSNP
rs575357373 829 dbSNP
rs969672931 834 dbSNP
rs1023871163 839 dbSNP
rs1269919851 840 dbSNP
rs1448990305 842 dbSNP
rs1327046440 844 dbSNP
rs1207872923 845 dbSNP
rs1253453311 852 dbSNP
rs1011489022 856 dbSNP
rs150517013 856 dbSNP
rs770158486 856 dbSNP
rs891741760 857 dbSNP
rs1053031694 859 dbSNP
rs1004005604 860 dbSNP
rs886819614 862 dbSNP
rs1350761855 863 dbSNP
rs1008024063 868 dbSNP
rs1459793625 869 dbSNP
rs142258325 874 dbSNP
rs1199955762 877 dbSNP
rs538771799 885 dbSNP
rs932754598 886 dbSNP
rs1290363759 887 dbSNP
rs899778019 890 dbSNP
rs1039620647 892 dbSNP
rs1283168581 907 dbSNP
rs1323245022 911 dbSNP
rs147366266 911 dbSNP
rs1264475434 914 dbSNP
rs1480780342 915 dbSNP
rs566511892 915 dbSNP
rs188923840 916 dbSNP
rs1471979279 925 dbSNP
rs1415180575 926 dbSNP
rs559334077 926 dbSNP
rs536108214 930 dbSNP
rs940046981 931 dbSNP
rs1349512933 932 dbSNP
rs115947283 935 dbSNP
rs1327840480 937 dbSNP
rs935430544 939 dbSNP
rs573459332 942 dbSNP
rs550511849 945 dbSNP
rs1226370896 947 dbSNP
rs1311828301 947 dbSNP
rs926823887 947 dbSNP
rs969403114 947 dbSNP
rs1342420149 954 dbSNP
rs916573969 963 dbSNP
rs1413476013 971 dbSNP
rs1373541418 977 dbSNP
rs1175497031 978 dbSNP
rs1482412902 978 dbSNP
rs531577920 979 dbSNP
rs1435073763 981 dbSNP
rs562578970 981 dbSNP
rs552220618 982 dbSNP
rs145899979 983 dbSNP
rs532493484 984 dbSNP
rs1184589111 986 dbSNP
rs1005428383 987 dbSNP
rs1450487265 988 dbSNP
rs951176339 988 dbSNP
rs1388574305 992 dbSNP
rs1029802574 1015 dbSNP
rs1242920351 1023 dbSNP
rs1334982808 1028 dbSNP
rs1360829471 1032 dbSNP
rs1186928168 1035 dbSNP
rs1445811890 1036 dbSNP
rs748505785 1040 dbSNP
rs1302209374 1041 dbSNP
rs1283050580 1042 dbSNP
rs1212171784 1044 dbSNP
rs1342103739 1046 dbSNP
rs1271251132 1049 dbSNP
rs979858791 1050 dbSNP
rs1230363082 1052 dbSNP
rs970252225 1054 dbSNP
rs1294913657 1056 dbSNP
rs868391682 1058 dbSNP
rs1341065649 1059 dbSNP
rs1219300104 1061 dbSNP
rs1216690445 1065 dbSNP
rs1021282589 1066 dbSNP
rs1280198434 1070 dbSNP
rs185303564 1074 dbSNP
rs1270466772 1077 dbSNP
rs1446619104 1080 dbSNP
rs1039336190 1085 dbSNP
rs1353066033 1092 dbSNP
rs955734815 1093 dbSNP
rs1031567821 1094 dbSNP
rs1465592278 1096 dbSNP
rs1314211454 1101 dbSNP
rs142422847 1107 dbSNP
rs893683034 1109 dbSNP
rs1052282470 1110 dbSNP
rs935129420 1114 dbSNP
rs1412843039 1115 dbSNP
rs1175208136 1116 dbSNP
rs1167976968 1117 dbSNP
rs927802812 1117 dbSNP
rs9820928 1118 dbSNP
rs574974042 1120 dbSNP
rs1420478613 1122 dbSNP
rs148486667 1123 dbSNP
rs544947803 1126 dbSNP
rs9858285 1128 dbSNP
rs1263039558 1130 dbSNP
rs908092205 1136 dbSNP
rs1246640588 1140 dbSNP
rs983657671 1141 dbSNP
rs1199771862 1147 dbSNP
rs955068908 1150 dbSNP
rs1030485646 1155 dbSNP
rs1188760959 1156 dbSNP
rs1198835255 1157 dbSNP
rs752025485 1166 dbSNP
rs563192956 1173 dbSNP
rs553696983 1184 dbSNP
rs1387549023 1185 dbSNP
rs749888481 1188 dbSNP
rs1438801898 1195 dbSNP
rs1325059751 1208 dbSNP
rs540082013 1209 dbSNP
rs535568307 1210 dbSNP
rs551604074 1211 dbSNP
rs1288506756 1214 dbSNP
rs7644737 1219 dbSNP
rs758486233 1221 dbSNP
rs1233369672 1235 dbSNP
rs1372522187 1240 dbSNP
rs1350365973 1243 dbSNP
rs908563006 1244 dbSNP
rs999437465 1245 dbSNP
rs538398061 1252 dbSNP
rs1450152011 1255 dbSNP
rs1056628405 1257 dbSNP
rs376675178 1260 dbSNP
rs939630163 1260 dbSNP
rs906395306 1262 dbSNP
rs1179872862 1272 dbSNP
rs926791293 1275 dbSNP
rs1363181235 1284 dbSNP
rs538707403 1285 dbSNP
rs1322675608 1288 dbSNP
rs946912608 1289 dbSNP
rs750609453 1290 dbSNP
rs989933847 1291 dbSNP
rs1420299408 1296 dbSNP
rs144644853 1297 dbSNP
rs1308278298 1303 dbSNP
rs1165737972 1304 dbSNP
rs1472336688 1305 dbSNP
rs184801589 1306 dbSNP
rs879426464 1307 dbSNP
rs955312697 1308 dbSNP
rs941987605 1320 dbSNP
rs1212229403 1321 dbSNP
rs1466813782 1323 dbSNP
rs1274736732 1355 dbSNP
rs1213758692 1356 dbSNP
rs1028250258 1359 dbSNP
rs984136800 1360 dbSNP
rs1171881318 1363 dbSNP
rs372606417 1378 dbSNP
rs1315865077 1385 dbSNP
rs1304747212 1387 dbSNP
rs933579533 1390 dbSNP
rs182325353 1391 dbSNP
rs189238087 1392 dbSNP
rs386665325 1393 dbSNP
rs1443786025 1399 dbSNP
rs557122536 1400 dbSNP
rs1391659502 1402 dbSNP
rs1427223541 1417 dbSNP
rs1297164763 1424 dbSNP
rs149318745 1433 dbSNP
rs1397059937 1437 dbSNP
rs989122849 1438 dbSNP
rs1336720453 1442 dbSNP
rs568884482 1447 dbSNP
rs1339034217 1448 dbSNP
rs887092253 1451 dbSNP
rs1298581389 1452 dbSNP
rs1056431389 1453 dbSNP
rs552157563 1455 dbSNP
rs939598930 1466 dbSNP
rs569522509 1467 dbSNP
rs1250888843 1469 dbSNP
rs1453104422 1475 dbSNP
rs999891595 1487 dbSNP
rs906412817 1493 dbSNP
rs1045323053 1494 dbSNP
rs946850913 1503 dbSNP
rs915423749 1509 dbSNP
rs1447343071 1510 dbSNP
rs1012059052 1515 dbSNP
rs1377629958 1518 dbSNP
rs1467161106 1519 dbSNP
rs1174777696 1539 dbSNP
rs990290222 1540 dbSNP
rs1192147157 1541 dbSNP
rs934419894 1545 dbSNP
rs1367607078 1564 dbSNP
rs1295136871 1566 dbSNP
rs1380689292 1566 dbSNP
rs1037814668 1567 dbSNP
rs895250118 1567 dbSNP
rs1254470548 1574 dbSNP
rs532460792 1579 dbSNP
rs942079116 1579 dbSNP
rs924269601 1581 dbSNP
rs560626648 1585 dbSNP
rs1047720213 1603 dbSNP
rs1209104120 1603 dbSNP
rs955029315 1606 dbSNP
rs1463379092 1611 dbSNP
rs1185529916 1613 dbSNP
rs1267636894 1620 dbSNP
rs1434373918 1626 dbSNP
rs184350309 1627 dbSNP
rs1469793027 1631 dbSNP
rs975372028 1632 dbSNP
rs933568706 1639 dbSNP
rs923511723 1644 dbSNP
rs1039188962 1645 dbSNP
rs1217312407 1645 dbSNP
rs1288463742 1646 dbSNP
rs914731317 1648 dbSNP
rs1281513567 1662 dbSNP
rs1317436027 1663 dbSNP
rs1290169808 1673 dbSNP
rs1326754097 1674 dbSNP
rs192717414 1676 dbSNP
rs989225784 1677 dbSNP
rs187024714 1678 dbSNP
rs184146224 1680 dbSNP
rs1267487937 1688 dbSNP
rs1472636727 1691 dbSNP
rs1016792331 1694 dbSNP
rs1183486377 1696 dbSNP
rs1303915878 1702 dbSNP
rs544883593 1713 dbSNP
rs1417686016 1718 dbSNP
rs149655052 1724 dbSNP
rs1350670645 1725 dbSNP
rs923607569 1731 dbSNP
rs1360153280 1734 dbSNP
rs977751487 1742 dbSNP
rs1004253139 1745 dbSNP
rs1454432682 1747 dbSNP
rs1375363447 1748 dbSNP
rs971065892 1750 dbSNP
rs1371144730 1752 dbSNP
rs1172372507 1754 dbSNP
rs887228038 1762 dbSNP
rs1396030388 1766 dbSNP
rs531251819 1769 dbSNP
rs1188340194 1773 dbSNP
rs1427483213 1780 dbSNP
rs1290623548 1783 dbSNP
rs537167153 1785 dbSNP
rs545028884 1800 dbSNP
rs1206746570 1813 dbSNP
rs1254559637 1814 dbSNP
rs1479974958 1818 dbSNP
rs1177145970 1821 dbSNP
rs1187745691 1825 dbSNP
rs1425956241 1827 dbSNP
rs757538537 1830 dbSNP
rs1161849523 1831 dbSNP
rs1485936550 1832 dbSNP
rs1256679406 1833 dbSNP
rs568114967 1841 dbSNP
rs1352677009 1842 dbSNP
rs1441318898 1842 dbSNP
rs1303363181 1847 dbSNP
rs1045695540 1850 dbSNP
rs139590302 1853 dbSNP
rs771512527 1854 dbSNP
rs1342488172 1861 dbSNP
rs553014278 1862 dbSNP
rs1306415455 1865 dbSNP
rs1235182922 1870 dbSNP
rs934388720 1871 dbSNP
rs1048197703 1873 dbSNP
rs375691439 1875 dbSNP
rs997496117 1876 dbSNP
rs1450387172 1877 dbSNP
rs1305980257 1887 dbSNP
rs573748198 1887 dbSNP
rs1050851160 1890 dbSNP
rs902109641 1897 dbSNP
rs745368941 1899 dbSNP
rs1298078141 1901 dbSNP
rs933618215 1905 dbSNP
rs1039283692 1912 dbSNP
rs1192569104 1913 dbSNP
rs1382830783 1916 dbSNP
rs920970378 1933 dbSNP
rs1436738201 1939 dbSNP
rs866433407 1941 dbSNP
rs1354949304 1949 dbSNP
rs943617784 1955 dbSNP
rs1360601239 1958 dbSNP
rs547887822 1959 dbSNP
rs549652838 1959 dbSNP
rs962698321 1960 dbSNP
rs6784930 1961 dbSNP
rs145986442 1962 dbSNP
rs1376595161 1966 dbSNP
rs759003230 1966 dbSNP
rs1240605267 1967 dbSNP
rs1475114845 1971 dbSNP
rs951218910 1973 dbSNP
rs557671604 1974 dbSNP
rs1427179750 1979 dbSNP
rs1167691706 1986 dbSNP
rs76135430 1992 dbSNP
rs1175619253 1997 dbSNP
rs923685260 1997 dbSNP
rs1003595364 2002 dbSNP
rs1389048414 2003 dbSNP
rs1370963108 2008 dbSNP
rs1172137635 2011 dbSNP
rs978180355 2016 dbSNP
rs1344278396 2020 dbSNP
rs969778494 2021 dbSNP
rs566780333 2022 dbSNP
rs1185181973 2025 dbSNP
rs547054063 2026 dbSNP
rs1207315350 2029 dbSNP
rs1258221445 2035 dbSNP
rs1282389996 2036 dbSNP
rs770537664 2045 dbSNP
rs990768584 2046 dbSNP
rs894089985 2049 dbSNP
rs1479566918 2053 dbSNP
rs1412678164 2054 dbSNP
rs776404904 2054 dbSNP
rs1052692333 2062 dbSNP
rs999673146 2066 dbSNP
rs1156663294 2071 dbSNP
rs13322080 2076 dbSNP
rs113236387 2078 dbSNP
rs1325119127 2081 dbSNP
rs1334471698 2082 dbSNP
rs1006018708 2091 dbSNP
rs933752699 2102 dbSNP
rs1351693690 2104 dbSNP
rs80312230 2109 dbSNP
rs1039406087 2114 dbSNP
rs1350431584 2116 dbSNP
rs941032206 2117 dbSNP
rs1026372994 2124 dbSNP
rs1489872980 2127 dbSNP
rs1390000932 2131 dbSNP
rs909760432 2135 dbSNP
rs531186924 2139 dbSNP
rs951189566 2142 dbSNP
rs1299120279 2153 dbSNP
rs1465769011 2156 dbSNP
rs1179589453 2163 dbSNP
rs1362950919 2169 dbSNP
rs927829358 2170 dbSNP
rs1165042455 2185 dbSNP
rs1383042440 2187 dbSNP
rs982141479 2188 dbSNP
rs113985515 2204 dbSNP
rs1168738403 2207 dbSNP
rs192261002 2208 dbSNP
rs969537021 2211 dbSNP
rs561450800 2220 dbSNP
rs1181052717 2221 dbSNP
rs142457222 2229 dbSNP
rs1010871463 2231 dbSNP
rs760379374 2241 dbSNP
rs528077852 2242 dbSNP
rs1357634816 2243 dbSNP
rs1468199122 2261 dbSNP
rs559103938 2264 dbSNP
rs1275359101 2265 dbSNP
rs1341578472 2271 dbSNP
rs1031231427 2275 dbSNP
rs565882366 2280 dbSNP
rs755324719 2283 dbSNP
rs890612000 2286 dbSNP
rs1054565666 2287 dbSNP
rs770470582 2290 dbSNP
rs1030544006 2291 dbSNP
rs998335959 2300 dbSNP
rs1443699798 2301 dbSNP
rs1188805886 2304 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000462833.1 | 3UTR | UGCGGAAAGGGAGUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
94 hsa-miR-4753-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT064916 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT161166 SLC25A36 solute carrier family 25 member 36 2 2
MIRT285542 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT308266 LRIG1 leucine rich repeats and immunoglobulin like domains 1 2 2
MIRT311425 LMNB1 lamin B1 2 2
MIRT373989 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT383141 CRY2 cryptochrome circadian clock 2 2 2
MIRT405243 ADIPOR2 adiponectin receptor 2 2 2
MIRT441620 ROCK1 Rho associated coiled-coil containing protein kinase 1 2 6
MIRT441789 SRPK1 SRSF protein kinase 1 2 2
MIRT441804 NOC3L NOC3 like DNA replication regulator 2 2
MIRT441832 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT442005 NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 2 2
MIRT442411 LIMD1 LIM domains containing 1 2 2
MIRT442708 UBE4B ubiquitination factor E4B 2 2
MIRT442714 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT442738 SERINC5 serine incorporator 5 2 2
MIRT442793 CEP170 centrosomal protein 170 2 2
MIRT442984 ZNF736 zinc finger protein 736 2 2
MIRT443055 THRB thyroid hormone receptor beta 2 2
MIRT443288 ZC3H12A zinc finger CCCH-type containing 12A 2 2
MIRT443325 SLC35G1 solute carrier family 35 member G1 2 2
MIRT443331 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT443593 ZNF439 zinc finger protein 439 2 4
MIRT443696 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT443748 ELL2 elongation factor for RNA polymerase II 2 2 2
MIRT443866 HDLBP high density lipoprotein binding protein 2 2
MIRT461185 LTBP2 latent transforming growth factor beta binding protein 2 2 2
MIRT464074 WAC WW domain containing adaptor with coiled-coil 2 2
MIRT468738 SDC4 syndecan 4 2 2
MIRT470540 COASY Coenzyme A synthase 2 2
MIRT476458 GBA2 glucosylceramidase beta 2 2 2
MIRT479470 CDK6 cyclin dependent kinase 6 2 2
MIRT486351 TACC2 transforming acidic coiled-coil containing protein 2 2 8
MIRT495126 CXorf67 chromosome X open reading frame 67 2 2
MIRT495166 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495432 ATG7 autophagy related 7 2 2
MIRT495922 FBXO41 F-box protein 41 2 2
MIRT496572 DGCR6L DiGeorge syndrome critical region gene 6 like 2 2
MIRT498277 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT498431 DDX39A DExD-box helicase 39A 2 2
MIRT530149 HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 2 2
MIRT530313 TNFRSF10D TNF receptor superfamily member 10d 2 2
MIRT530880 TRUB1 TruB pseudouridine synthase family member 1 2 4
MIRT531177 ZNF626 zinc finger protein 626 2 2
MIRT533395 TYRP1 tyrosinase related protein 1 2 2
MIRT533709 TMEM64 transmembrane protein 64 2 2
MIRT533954 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 2
MIRT535616 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT539472 ADARB2 adenosine deaminase, RNA specific B2 (inactive) 2 2
MIRT542878 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT559077 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT559465 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT561233 ZNF772 zinc finger protein 772 2 2
MIRT563477 POLE3 DNA polymerase epsilon 3, accessory subunit 2 2
MIRT563995 SLFN11 schlafen family member 11 2 2
MIRT564222 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT566017 RHOA ras homolog family member A 2 2
MIRT566028 RFX1 regulatory factor X1 2 2
MIRT566591 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT567874 CTDSP1 CTD small phosphatase 1 2 2
MIRT568552 AKT2 AKT serine/threonine kinase 2 2 2
MIRT569357 EFHC1 EF-hand domain containing 1 2 2
MIRT569973 DNAAF2 dynein axonemal assembly factor 2 2 2
MIRT614423 ZNF440 zinc finger protein 440 2 2
MIRT628831 SLC25A34 solute carrier family 25 member 34 2 2
MIRT630142 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT634479 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 2
MIRT634498 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT637394 R3HDM2 R3H domain containing 2 2 2
MIRT641840 TCF7L2 transcription factor 7 like 2 2 2
MIRT644397 CDKL1 cyclin dependent kinase like 1 2 2
MIRT644888 C2orf50 chromosome 2 open reading frame 50 2 2
MIRT647124 ZNF446 zinc finger protein 446 2 2
MIRT647420 SSTR3 somatostatin receptor 3 2 2
MIRT650297 PYCARD PYD and CARD domain containing 2 2
MIRT655488 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT658185 FBXO9 F-box protein 9 2 2
MIRT660931 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT665317 ZBTB3 zinc finger and BTB domain containing 3 2 2
MIRT670350 C1orf106 chromosome 1 open reading frame 106 2 4
MIRT670823 NICN1 nicolin 1 2 2
MIRT671825 TRPM6 transient receptor potential cation channel subfamily M member 6 2 2
MIRT672732 NETO2 neuropilin and tolloid like 2 2 2
MIRT674841 GLRX2 glutaredoxin 2 2 2
MIRT675930 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT686786 AZF1 azoospermia factor 1 2 2
MIRT697723 USP8 ubiquitin specific peptidase 8 2 2
MIRT702357 KLHL26 kelch like family member 26 2 2
MIRT704361 DBR1 debranching RNA lariats 1 2 2
MIRT709242 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT714433 SNED1 sushi, nidogen and EGF like domains 1 2 2
MIRT717000 ARL6IP4 ADP ribosylation factor like GTPase 6 interacting protein 4 2 2
MIRT720875 ADCY5 adenylate cyclase 5 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4753 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-4753-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4753-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4753-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-4753-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-4753-5p Platinum 23939 resistant tissue
hsa-miR-4753-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4753-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-4753-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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