pre-miRNA Information
pre-miRNA hsa-mir-6769b   
Genomic Coordinates chr1: 206474803 - 206474864
Description Homo sapiens miR-6769b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6769b-3p
Sequence 42| CCCUCUCUGUCCCACCCAUAG |62
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26671848 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs555627187 3 dbSNP
rs782102173 4 dbSNP
rs201952639 7 dbSNP
rs782001154 9 dbSNP
rs1488064450 15 dbSNP
rs782111367 16 dbSNP
rs370859899 18 dbSNP
rs1305197911 19 dbSNP
Putative Targets

Gene Information
Gene Symbol CARHSP1   
Synonyms CRHSP-24, CRHSP24, CSDC1
Description calcium regulated heat stable protein 1
Transcript NM_001042476   
Other Transcripts NM_014316   
Expression
Putative miRNA Targets on CARHSP1
3'UTR of CARHSP1
(miRNA target sites are highlighted)
>CARHSP1|NM_001042476|3'UTR
   1 GAGATGGTGGAAGCACCCCTTGTCCTGTGCTTGTGGGAGACTTTGCAGGGAGGAGGCAGCAGACACTGGAGATGACATTC
  81 TTCCACACGAGACGGGGCTTCAGCCGGGCATGGTCCCTCTCAAGTATCTCCTGGAGGAAGGGGTATGGGGGGCAGGTGTG
 161 GGGTGTGGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTCTCACCATCTGAAGAGCATTAAAAGCA
 241 TTTAAAAAGGAGAGGTGCCCACTGGTGGCTGAGTGGAGGTTCCAACCCCATCCCAGGGAGTGGATCAAGGGTGGTATTTC
 321 TCCAGCTGCTCAGACACATGGGCTCAACCCACAGAATCCCTCTTCCTCCTGGAGCTGGAGGCCCCAGATTCCCAGATCTG
 401 GCCCCCTGGCAGCCTGACAGGGACCTTGCGTGACTTCTCCAAGGCAAATTTCCACCTAAGTGCCCCTTGCGCCTCTCCTG
 481 GGGCCTGGGCAAAGCAGTTTTCTAATTCTTGGCTTGGTTGGTTCTAGGGGAGCTGGCTTGAAGTGGGTGGGGAAAGGCGG
 561 GGGTGGCGGTCTTTGGATTGGACGGATGTTGCCTTTTGGTGCCTTTGCAGTGGGAGGCGGCATAGCTGCCTGTCTGGGGA
 641 AGACAGTTCTCCCAGCACTCCCACCCCTGGGCACAGCAGGCTGGTACTGGGAGGCTGAACCCCTCTTAGAGCCTGACCTT
 721 TTCATCTGCCTTCTGGTTGTGTGACCATCACTCAACAGCCATTTCACAGCCCCTGTAATTATGGCGGCGGGGGGCTGGGG
 801 TGGTGGTGGTGGGAAGGGCTTGTGGAGAGGACACAGTCTTTGTTTAAAAACTTTGTCCCGATCCATCCAGAAAAGAGTAG
 881 GTAGCTTGCATCCTGACAGCCTGGCAAAGTCAAGAAAGTTGAAGGAGAAACATACCTTTGGAGAGGGGGTTTTCTTTAAA
 961 ACTAGTGTTAAGAAATGCTTAGGGATTTTTTTTTTCTTATTTTTCATAACTAAAGCTTTCACCCAGAGCCGGCTCTGTTT
1041 GCACTTTGCTGCCGACATTGCAAACTTTTTGGCAGGGTGGGAGACTGAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGT
1121 GGCCCGATCTCAGCTTACTGCAACCTCTGCCCTCCAGGGTTCTGGCAATTCCGCCTCAGTCTCCTGAGTAGCTGGGATTA
1201 CAGGCATGCGCCACCACACCCGGTTAATTTTTGTATTTTTAGTAGAGACCAGGTTTCATCATGTTGGGCAGGATGGTCTT
1281 GAACCCCTGACCTCAGATGATCTGCCCATCTCGGCCTCTCAAAGTGCTGGGATTACAAGTGTGAGCCATCGCGCCCGGCC
1361 TGCAAACTTTTTTGTAGGTATTTCTGGTAAACAAATCCTTAGGTTATCTTTGCTGTGGTTGTGGTTTGGCTTTAGTCATG
1441 ATTTCAAAGTAGAAATAGCTAGGCATTATTTTTTGAAATATATGACCTATATGTAGTCAAGAATCCACTGAACAGAGGCA
1521 AGCAAACCTTTTGGAAACTGGCTTTTGGGCAGACAGTAAACGTCCAGTTTGATGCTGGAAGCATGAACAGCTTCATCAGG
1601 TAGGTACTCCTCAACTCTGATGAGTTTGTCCTTTCAGCCTAAGGGGGTGGAAGGGAGTTGTTTGAGAATAGCAAATACGC
1681 ATGTTGATTGCGAGTGTGTGGAGACAAAGGCAGTTCCCACCACAGTTAGGTCCTGGCCATTGTTTCCTCGCCTGCGATGC
1761 TCCTTGTACATCCTCACCCTCCTCTCCCGCCTCTGCCTTCTGCTGGGTCAAAGGTGGCCTTTTCTCTCCAGCCTTGAATT
1841 GTTCCCTGTTGGCTTCCCAAGGGCCCATCTGCTGGTACAGTCCACACTTCCACAGCCAAGACCCGAGAGGGCTTTCACTG
1921 CCCCAAGCCTCTCTCCTGTGACCCTGGGATTCTGTCTTGGCAGAATCCTTTGTCAGCGGCTCTTACTCTGTCCTTCCTGT
2001 TTGGCCACAGCTCTTTCAATCAATGGGTATTCTAGAACCGCAGGATGTCAGAGCTGGAAGGGACGCGATACCGGTTTACA
2081 CAAGGGGAAACTCCTCGAGGCTCTGGGAGGGACGGAGGGTTTTGGTGACAGAGCGAGAGCTAAAATTGAGGATTCCTGAA
2161 TCCAGATCTTGCCTCCCATCAGCCATCTTTCTCCCAATAAATTTTTGTTTTGTGCAAGGCTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaUACCCACCCUG----UCUCUCCc 5'
            :||||  ||:|    :|||||| 
Target 5' tgGTGGGAAGGGCTTGTGGAGAGGa 3'
807 - 831 141.00 -20.40
2
miRNA  3' gauaccCACCCU-------GUCUCUCCc 5'
                ||||||       |||:|||| 
Target 5' gtgcttGTGGGAGACTTTGCAGGGAGGa 3'
27 - 54 139.00 -19.41
3
miRNA  3' gauACCCACCCUGUCUCUCcc 5'
             |||| |||||:|||:|  
Target 5' ctcTGGGAGGGACGGAGGGtt 3'
2101 - 2121 130.00 -26.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31534745 2 COSMIC
COSN30172659 37 COSMIC
COSN30150277 71 COSMIC
COSN30503884 89 COSMIC
COSN16129412 101 COSMIC
COSN30637246 129 COSMIC
COSN31602385 145 COSMIC
COSN30107129 156 COSMIC
COSN30161367 192 COSMIC
COSN31611273 192 COSMIC
COSN30172214 227 COSMIC
COSN7158675 281 COSMIC
COSN7158674 322 COSMIC
COSN7158673 333 COSMIC
COSN22690334 362 COSMIC
COSN15819545 623 COSMIC
COSN28823607 642 COSMIC
COSN36906 804 COSMIC
COSN20112594 985 COSMIC
COSN24699925 1030 COSMIC
COSN21450899 1377 COSMIC
COSN21820936 1564 COSMIC
COSN9221981 1678 COSMIC
COSN20112591 1739 COSMIC
COSN2529647 1819 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769656308 1 dbSNP
rs1263824678 3 dbSNP
rs761553234 5 dbSNP
rs1421687369 6 dbSNP
rs917908391 8 dbSNP
rs1419411559 9 dbSNP
rs776376647 12 dbSNP
rs1158019049 14 dbSNP
rs772063723 16 dbSNP
rs1379849567 17 dbSNP
rs746072869 22 dbSNP
rs770848683 24 dbSNP
rs1267129486 25 dbSNP
rs374007002 27 dbSNP
rs1464137356 28 dbSNP
rs1301854002 29 dbSNP
rs369206684 30 dbSNP
rs527493893 32 dbSNP
rs376768452 33 dbSNP
rs751108950 34 dbSNP
rs201587341 38 dbSNP
rs750403912 39 dbSNP
rs765123969 41 dbSNP
rs750051026 45 dbSNP
rs761712539 45 dbSNP
rs776464949 46 dbSNP
rs6898 47 dbSNP
rs774377522 48 dbSNP
rs771063818 49 dbSNP
rs773740680 54 dbSNP
rs1022746382 56 dbSNP
rs778795377 57 dbSNP
rs542156901 60 dbSNP
rs892438541 61 dbSNP
rs1029196272 62 dbSNP
rs1373220013 65 dbSNP
rs1209209546 67 dbSNP
rs1031105924 68 dbSNP
rs995920576 69 dbSNP
rs1310361126 73 dbSNP
rs1303392851 74 dbSNP
rs1008953166 79 dbSNP
rs1370391054 80 dbSNP
rs890968215 82 dbSNP
rs1050914667 88 dbSNP
rs529984276 89 dbSNP
rs899738523 91 dbSNP
rs781101809 93 dbSNP
rs562889818 94 dbSNP
rs866877363 96 dbSNP
rs1248325371 102 dbSNP
rs1487467007 103 dbSNP
rs144935505 105 dbSNP
rs751293934 106 dbSNP
rs939101117 108 dbSNP
rs928169541 114 dbSNP
rs577299365 117 dbSNP
rs1357802960 118 dbSNP
rs917925754 119 dbSNP
rs1352061477 121 dbSNP
rs1434944483 122 dbSNP
rs6899 123 dbSNP
rs1362728104 124 dbSNP
rs935590496 128 dbSNP
rs924164390 130 dbSNP
rs1341734789 131 dbSNP
rs1379713922 136 dbSNP
rs1246353547 137 dbSNP
rs970067487 138 dbSNP
rs1319764479 139 dbSNP
rs540867865 142 dbSNP
rs1261284698 146 dbSNP
rs1022563577 147 dbSNP
rs1246969364 148 dbSNP
rs141888260 153 dbSNP
rs397839986 153 dbSNP
rs1183308183 154 dbSNP
rs1421071448 154 dbSNP
rs968208887 155 dbSNP
rs990110233 157 dbSNP
rs1318621770 158 dbSNP
rs1364632742 159 dbSNP
rs1161992483 160 dbSNP
rs1453638853 160 dbSNP
rs974909646 161 dbSNP
rs1227564952 162 dbSNP
rs1376656644 162 dbSNP
rs386788726 162 dbSNP
rs1284808452 163 dbSNP
rs965798925 164 dbSNP
rs1019028084 165 dbSNP
rs1461427714 166 dbSNP
rs956740544 168 dbSNP
rs1030968760 172 dbSNP
rs1009026619 173 dbSNP
rs528444961 174 dbSNP
rs546781738 174 dbSNP
rs768424180 174 dbSNP
rs950354620 174 dbSNP
rs573359139 176 dbSNP
rs554702983 177 dbSNP
rs1029533415 178 dbSNP
rs34609138 178 dbSNP
rs1352959767 180 dbSNP
rs996675565 181 dbSNP
rs199604573 189 dbSNP
rs1038296143 191 dbSNP
rs1288754958 192 dbSNP
rs1352180464 193 dbSNP
rs1226488634 195 dbSNP
rs1012766083 196 dbSNP
rs896531349 199 dbSNP
rs536562914 202 dbSNP
rs1056400579 204 dbSNP
rs1441486908 207 dbSNP
rs1204856316 208 dbSNP
rs1317128562 213 dbSNP
rs935371298 216 dbSNP
rs1052192 222 dbSNP
rs902501152 226 dbSNP
rs1180609267 232 dbSNP
rs941234872 237 dbSNP
rs569185712 240 dbSNP
rs1423246906 243 dbSNP
rs922111740 243 dbSNP
rs111581440 244 dbSNP
rs3180514 249 dbSNP
rs555774773 250 dbSNP
rs113361415 252 dbSNP
rs1046706219 254 dbSNP
rs939132411 255 dbSNP
rs537434567 257 dbSNP
rs570575838 258 dbSNP
rs911679431 259 dbSNP
rs1307298814 266 dbSNP
rs1377385218 268 dbSNP
rs980906634 270 dbSNP
rs1272565079 271 dbSNP
rs948261130 271 dbSNP
rs1343740235 274 dbSNP
rs531807648 275 dbSNP
rs551991300 278 dbSNP
rs1276383249 285 dbSNP
rs1344706508 286 dbSNP
rs1203481732 288 dbSNP
rs764058303 293 dbSNP
rs1452697558 295 dbSNP
rs1201732901 299 dbSNP
rs1245046072 301 dbSNP
rs1315205776 302 dbSNP
rs1169435377 303 dbSNP
rs1415909123 304 dbSNP
rs527342363 309 dbSNP
rs983196957 310 dbSNP
rs1167729239 311 dbSNP
rs566567788 319 dbSNP
rs1391264431 329 dbSNP
rs1388428245 331 dbSNP
rs368409694 335 dbSNP
rs1316058053 336 dbSNP
rs950386860 337 dbSNP
rs1027312231 339 dbSNP
rs1299294056 341 dbSNP
rs1362601350 342 dbSNP
rs1226564335 344 dbSNP
rs1251101855 345 dbSNP
rs973330143 346 dbSNP
rs1212134023 347 dbSNP
rs1288404553 348 dbSNP
rs964752002 351 dbSNP
rs548374827 354 dbSNP
rs1189324968 359 dbSNP
rs987458566 360 dbSNP
rs1447879636 366 dbSNP
rs1023224117 368 dbSNP
rs1368803100 371 dbSNP
rs1364472066 372 dbSNP
rs1164264212 378 dbSNP
rs954802083 380 dbSNP
rs1457257888 381 dbSNP
rs1321980200 384 dbSNP
rs1014057156 385 dbSNP
rs144436300 390 dbSNP
rs996627996 391 dbSNP
rs184483925 393 dbSNP
rs1247486894 395 dbSNP
rs761300288 396 dbSNP
rs1334769264 398 dbSNP
rs902533883 400 dbSNP
rs544656735 403 dbSNP
rs1270073497 405 dbSNP
rs1005499920 407 dbSNP
rs1463636522 408 dbSNP
rs1487920117 408 dbSNP
rs1257160754 409 dbSNP
rs532398525 410 dbSNP
rs1185159028 411 dbSNP
rs887012890 413 dbSNP
rs1043682508 414 dbSNP
rs1472875119 415 dbSNP
rs1206840841 417 dbSNP
rs1046739016 421 dbSNP
rs1456289722 425 dbSNP
rs946960665 426 dbSNP
rs1264388464 427 dbSNP
rs1003180599 428 dbSNP
rs1242093778 429 dbSNP
rs906179806 430 dbSNP
rs1229523025 432 dbSNP
rs139685081 437 dbSNP
rs944931669 439 dbSNP
rs1238446570 441 dbSNP
rs1256750734 443 dbSNP
rs947756230 447 dbSNP
rs768002918 451 dbSNP
rs1234353211 458 dbSNP
rs28584810 460 dbSNP
rs759833338 463 dbSNP
rs1296823910 464 dbSNP
rs540380783 470 dbSNP
rs552435445 471 dbSNP
rs554770854 472 dbSNP
rs924173274 473 dbSNP
rs542797139 477 dbSNP
rs1375184340 479 dbSNP
rs987700846 481 dbSNP
rs954699521 482 dbSNP
rs1456556043 483 dbSNP
rs1310337605 484 dbSNP
rs1420381637 487 dbSNP
rs1349189587 489 dbSNP
rs921886235 490 dbSNP
rs770739220 491 dbSNP
rs1477341230 494 dbSNP
rs1022917014 496 dbSNP
rs1342562501 501 dbSNP
rs1421219531 502 dbSNP
rs1249463055 505 dbSNP
rs1480273282 508 dbSNP
rs993133746 512 dbSNP
rs1430988890 517 dbSNP
rs1172581718 518 dbSNP
rs959926753 522 dbSNP
rs1170883045 523 dbSNP
rs1369166993 527 dbSNP
rs1294683167 528 dbSNP
rs532732432 529 dbSNP
rs1385193742 531 dbSNP
rs1016795800 533 dbSNP
rs1005778573 535 dbSNP
rs951194589 536 dbSNP
rs1306750136 537 dbSNP
rs1222173941 539 dbSNP
rs575574566 540 dbSNP
rs1487190176 542 dbSNP
rs1207590351 544 dbSNP
rs557230026 545 dbSNP
rs1022260324 546 dbSNP
rs1010941632 547 dbSNP
rs2447924 548 dbSNP
rs1039312260 549 dbSNP
rs1437515918 549 dbSNP
rs1295723971 551 dbSNP
rs570363811 551 dbSNP
rs1045125057 553 dbSNP
rs1228692994 553 dbSNP
rs929044051 555 dbSNP
rs1206406390 556 dbSNP
rs1465901138 556 dbSNP
rs1012033755 558 dbSNP
rs893534757 559 dbSNP
rs1333804461 560 dbSNP
rs1416510363 561 dbSNP
rs948454883 562 dbSNP
rs1001007757 564 dbSNP
rs1164887283 565 dbSNP
rs1300673443 567 dbSNP
rs1385216826 568 dbSNP
rs915546965 571 dbSNP
rs1448397625 573 dbSNP
rs1304363243 574 dbSNP
rs117557663 576 dbSNP
rs1288954872 578 dbSNP
rs1330557588 581 dbSNP
rs878962978 583 dbSNP
rs960203913 583 dbSNP
rs3785173 584 dbSNP
rs1211888555 586 dbSNP
rs3785172 588 dbSNP
rs1022374864 589 dbSNP
rs1187802706 592 dbSNP
rs1253192467 594 dbSNP
rs1052017557 596 dbSNP
rs35664570 598 dbSNP
rs1473578932 602 dbSNP
rs1156897930 604 dbSNP
rs1475684905 607 dbSNP
rs1178566501 611 dbSNP
rs1011389932 612 dbSNP
rs1413976593 613 dbSNP
rs964770526 614 dbSNP
rs933555307 617 dbSNP
rs548436286 618 dbSNP
rs529904304 619 dbSNP
rs1276099302 620 dbSNP
rs1346107870 623 dbSNP
rs1210631593 626 dbSNP
rs1253089754 628 dbSNP
rs942149678 631 dbSNP
rs768585588 632 dbSNP
rs746833699 634 dbSNP
rs1478420403 635 dbSNP
rs1193095598 636 dbSNP
rs1393527724 637 dbSNP
rs983470587 638 dbSNP
rs1433806810 643 dbSNP
rs1456187417 645 dbSNP
rs951225368 646 dbSNP
rs1025392647 649 dbSNP
rs1271284628 653 dbSNP
rs1331137605 656 dbSNP
rs779793609 664 dbSNP
rs191676261 669 dbSNP
rs1300730298 673 dbSNP
rs1340659710 679 dbSNP
rs1369790877 683 dbSNP
rs1228768594 689 dbSNP
rs1275778924 691 dbSNP
rs1344817923 693 dbSNP
rs970612559 699 dbSNP
rs1272962259 700 dbSNP
rs550896695 701 dbSNP
rs532394048 703 dbSNP
rs1223884220 707 dbSNP
rs1251303513 709 dbSNP
rs948443688 711 dbSNP
rs1189522051 717 dbSNP
rs1391767061 718 dbSNP
rs1474319475 720 dbSNP
rs915595808 734 dbSNP
rs1012309517 735 dbSNP
rs565151547 739 dbSNP
rs1393171104 742 dbSNP
rs1032522581 743 dbSNP
rs1435333184 746 dbSNP
rs999233441 747 dbSNP
rs1057161217 748 dbSNP
rs1225727201 749 dbSNP
rs371648750 753 dbSNP
rs201019841 755 dbSNP
rs1270069288 756 dbSNP
rs1357680969 757 dbSNP
rs1216173701 760 dbSNP
rs1271340659 769 dbSNP
rs938607580 770 dbSNP
rs528613503 773 dbSNP
rs1445005509 782 dbSNP
rs902720654 785 dbSNP
rs561038032 786 dbSNP
rs542862199 787 dbSNP
rs900732484 788 dbSNP
rs1039259610 789 dbSNP
rs965134369 790 dbSNP
rs112297505 794 dbSNP
rs1380821384 798 dbSNP
rs1017607752 800 dbSNP
rs1235660397 800 dbSNP
rs1013828245 801 dbSNP
rs942044574 806 dbSNP
rs1229094688 807 dbSNP
rs1410384710 807 dbSNP
rs954686816 811 dbSNP
rs1026608464 813 dbSNP
rs1348797632 813 dbSNP
rs896767817 814 dbSNP
rs1256560483 818 dbSNP
rs909175941 819 dbSNP
rs1256756535 824 dbSNP
rs983507902 826 dbSNP
rs1170675405 834 dbSNP
rs1160758781 836 dbSNP
rs146407712 836 dbSNP
rs1395111772 837 dbSNP
rs1177519523 839 dbSNP
rs918458129 840 dbSNP
rs1234310490 842 dbSNP
rs78968078 843 dbSNP
rs1403326219 845 dbSNP
rs1056874418 846 dbSNP
rs563501299 853 dbSNP
rs1311526175 855 dbSNP
rs1355402582 857 dbSNP
rs545395980 859 dbSNP
rs970697562 860 dbSNP
rs777974865 863 dbSNP
rs1255937087 875 dbSNP
rs1209291859 877 dbSNP
rs1041646388 878 dbSNP
rs1279447133 882 dbSNP
rs947277297 882 dbSNP
rs187137444 888 dbSNP
rs914430999 892 dbSNP
rs756155219 895 dbSNP
rs1199066074 896 dbSNP
rs1032005599 897 dbSNP
rs1436911742 900 dbSNP
rs182781507 903 dbSNP
rs999316813 904 dbSNP
rs902247402 906 dbSNP
rs190659799 912 dbSNP
rs767626866 918 dbSNP
rs1030534196 921 dbSNP
rs573013047 925 dbSNP
rs1371214352 927 dbSNP
rs1281084163 930 dbSNP
rs900645633 932 dbSNP
rs1302162476 933 dbSNP
rs1348797733 936 dbSNP
rs1373485931 940 dbSNP
rs1232440508 941 dbSNP
rs554698881 942 dbSNP
rs1039696545 943 dbSNP
rs987553324 944 dbSNP
rs1006440106 945 dbSNP
rs1342657306 946 dbSNP
rs1281434142 947 dbSNP
rs759840759 948 dbSNP
rs751899123 949 dbSNP
rs1209931828 950 dbSNP
rs972325256 950 dbSNP
rs929414671 953 dbSNP
rs1310869020 954 dbSNP
rs1016439131 957 dbSNP
rs1394837852 958 dbSNP
rs1429506811 958 dbSNP
rs536305154 959 dbSNP
rs1013535417 965 dbSNP
rs1461495244 969 dbSNP
rs894639735 971 dbSNP
rs569080442 972 dbSNP
rs1035870697 975 dbSNP
rs1376068393 976 dbSNP
rs1157514407 977 dbSNP
rs550716793 978 dbSNP
rs1365593140 979 dbSNP
rs1398391431 981 dbSNP
rs1293288562 982 dbSNP
rs928708904 983 dbSNP
rs1274476242 984 dbSNP
rs1158745175 986 dbSNP
rs1212627820 987 dbSNP
rs1248293415 990 dbSNP
rs1041341828 996 dbSNP
rs1188672495 996 dbSNP
rs1420082620 996 dbSNP
rs1486359707 996 dbSNP
rs369494018 996 dbSNP
rs554832186 996 dbSNP
rs1472272366 997 dbSNP
rs947309768 998 dbSNP
rs1186298646 999 dbSNP
rs1486940387 1005 dbSNP
rs187869321 1006 dbSNP
rs752765930 1007 dbSNP
rs1216542800 1008 dbSNP
rs942568906 1010 dbSNP
rs1445289918 1011 dbSNP
rs1295079315 1016 dbSNP
rs912381383 1017 dbSNP
rs916374480 1022 dbSNP
rs767933669 1023 dbSNP
rs987585065 1024 dbSNP
rs1224496083 1030 dbSNP
rs571503062 1031 dbSNP
rs1240688320 1032 dbSNP
rs933365577 1033 dbSNP
rs957981026 1034 dbSNP
rs1474226729 1037 dbSNP
rs919260510 1037 dbSNP
rs1355974673 1043 dbSNP
rs1408898824 1044 dbSNP
rs972022935 1048 dbSNP
rs544351494 1053 dbSNP
rs1234969963 1054 dbSNP
rs977741179 1058 dbSNP
rs966339317 1062 dbSNP
rs1428588923 1065 dbSNP
rs1035786161 1069 dbSNP
rs35101709 1071 dbSNP
rs1288423990 1076 dbSNP
rs1346403695 1078 dbSNP
rs1002580262 1081 dbSNP
rs967077220 1083 dbSNP
rs528465803 1084 dbSNP
rs1019920488 1086 dbSNP
rs1316655731 1087 dbSNP
rs997235090 1088 dbSNP
rs1212044742 1090 dbSNP
rs1283013671 1092 dbSNP
rs560902175 1094 dbSNP
rs549077171 1097 dbSNP
rs183666666 1100 dbSNP
rs1006922888 1103 dbSNP
rs1415292934 1105 dbSNP
rs1163212831 1108 dbSNP
rs1471214353 1111 dbSNP
rs1040064455 1112 dbSNP
rs888010908 1118 dbSNP
rs563564605 1119 dbSNP
rs1435039797 1120 dbSNP
rs890959831 1121 dbSNP
rs1373469060 1122 dbSNP
rs545564869 1123 dbSNP
rs1329513015 1124 dbSNP
rs578210872 1125 dbSNP
rs142250560 1126 dbSNP
rs919371781 1128 dbSNP
rs1036430305 1130 dbSNP
rs1243898428 1131 dbSNP
rs192462211 1143 dbSNP
rs993470611 1148 dbSNP
rs1451237573 1149 dbSNP
rs1271441365 1152 dbSNP
rs907186685 1154 dbSNP
rs1045792633 1155 dbSNP
rs909208519 1158 dbSNP
rs1232432992 1159 dbSNP
rs1454868013 1163 dbSNP
rs1335190624 1165 dbSNP
rs572877051 1168 dbSNP
rs1453598574 1171 dbSNP
rs370150824 1172 dbSNP
rs536368304 1173 dbSNP
rs1364033826 1175 dbSNP
rs1270263593 1176 dbSNP
rs1054950198 1178 dbSNP
rs1323511237 1179 dbSNP
rs1435208767 1184 dbSNP
rs936615293 1185 dbSNP
rs762755846 1186 dbSNP
rs925204775 1187 dbSNP
rs1271228337 1188 dbSNP
rs1342069291 1190 dbSNP
rs1391672281 1196 dbSNP
rs376874872 1197 dbSNP
rs1469002485 1199 dbSNP
rs1215732107 1201 dbSNP
rs977981048 1202 dbSNP
rs1467810277 1203 dbSNP
rs1193647844 1204 dbSNP
rs1011320870 1205 dbSNP
rs1474381092 1208 dbSNP
rs1461671908 1209 dbSNP
rs1395612971 1210 dbSNP
rs575382109 1211 dbSNP
rs1393296873 1214 dbSNP
rs556904653 1217 dbSNP
rs772996952 1219 dbSNP
rs1187626755 1221 dbSNP
rs372909120 1222 dbSNP
rs1278144389 1226 dbSNP
rs369365316 1233 dbSNP
rs1007240215 1235 dbSNP
rs891021044 1240 dbSNP
rs1271438088 1241 dbSNP
rs964490371 1242 dbSNP
rs1469110374 1244 dbSNP
rs1018212780 1245 dbSNP
rs1006375292 1259 dbSNP
rs1202259919 1261 dbSNP
rs1263562337 1262 dbSNP
rs766680945 1263 dbSNP
rs1192335009 1264 dbSNP
rs1273563689 1269 dbSNP
rs896989653 1271 dbSNP
rs1475869789 1279 dbSNP
rs1185144605 1280 dbSNP
rs139944823 1285 dbSNP
rs548074802 1289 dbSNP
rs1159987834 1293 dbSNP
rs764882927 1295 dbSNP
rs1677479 1297 dbSNP
rs1298051887 1298 dbSNP
rs909208212 1299 dbSNP
rs993668981 1300 dbSNP
rs1460734154 1301 dbSNP
rs1291504062 1303 dbSNP
rs907219124 1304 dbSNP
rs1339984291 1307 dbSNP
rs1024309481 1308 dbSNP
rs928918424 1310 dbSNP
rs374103741 1312 dbSNP
rs1013443985 1313 dbSNP
rs913392503 1315 dbSNP
rs546877361 1316 dbSNP
rs1018372892 1320 dbSNP
rs141826586 1321 dbSNP
rs1468869861 1322 dbSNP
rs936536947 1324 dbSNP
rs1158401085 1331 dbSNP
rs1376511934 1335 dbSNP
rs1437087564 1336 dbSNP
rs903650632 1341 dbSNP
rs1401540084 1343 dbSNP
rs1392045595 1348 dbSNP
rs1042336532 1350 dbSNP
rs1309353919 1350 dbSNP
rs1303838695 1351 dbSNP
rs567339400 1352 dbSNP
rs945267721 1353 dbSNP
rs548940318 1356 dbSNP
rs530941964 1357 dbSNP
rs994077903 1358 dbSNP
rs1193917188 1362 dbSNP
rs761227059 1364 dbSNP
rs1210014528 1369 dbSNP
rs896999521 1370 dbSNP
rs1016728673 1374 dbSNP
rs1172247580 1381 dbSNP
rs1377573797 1384 dbSNP
rs570116659 1385 dbSNP
rs1462997895 1392 dbSNP
rs1299964646 1393 dbSNP
rs943140808 1394 dbSNP
rs1281806517 1395 dbSNP
rs551724350 1396 dbSNP
rs1326851686 1400 dbSNP
rs1352511033 1402 dbSNP
rs1304329380 1403 dbSNP
rs1392803855 1406 dbSNP
rs984922296 1406 dbSNP
rs868543229 1410 dbSNP
rs768512169 1412 dbSNP
rs186078089 1415 dbSNP
rs532866995 1419 dbSNP
rs775322207 1422 dbSNP
rs1026405059 1424 dbSNP
rs1374242646 1425 dbSNP
rs1175580969 1426 dbSNP
rs972330815 1428 dbSNP
rs971605953 1430 dbSNP
rs1024757427 1435 dbSNP
rs370072859 1439 dbSNP
rs913402307 1440 dbSNP
rs1421513279 1444 dbSNP
rs1465195018 1449 dbSNP
rs148121648 1450 dbSNP
rs894445240 1452 dbSNP
rs1396977173 1453 dbSNP
rs1439055328 1456 dbSNP
rs1033101996 1461 dbSNP
rs1292723162 1462 dbSNP
rs1362442009 1463 dbSNP
rs1383825879 1463 dbSNP
rs1363309457 1475 dbSNP
rs1000247347 1479 dbSNP
rs541754102 1480 dbSNP
rs1408418826 1481 dbSNP
rs1274573503 1483 dbSNP
rs1187010374 1489 dbSNP
rs1220425207 1496 dbSNP
rs1042242708 1503 dbSNP
rs74674285 1507 dbSNP
rs985613508 1513 dbSNP
rs1188761365 1514 dbSNP
rs1261657813 1518 dbSNP
rs2437703 1519 dbSNP
rs1420191745 1528 dbSNP
rs1029299638 1531 dbSNP
rs117082139 1537 dbSNP
rs575451886 1542 dbSNP
rs1240716150 1549 dbSNP
rs1455159327 1551 dbSNP
rs943066882 1552 dbSNP
rs768175087 1555 dbSNP
rs1339746366 1559 dbSNP
rs910168369 1561 dbSNP
rs961261628 1562 dbSNP
rs984562956 1566 dbSNP
rs1317827349 1567 dbSNP
rs930384815 1575 dbSNP
rs1284394960 1576 dbSNP
rs1034476932 1580 dbSNP
rs919451807 1581 dbSNP
rs1259674690 1584 dbSNP
rs1233114598 1587 dbSNP
rs1181454549 1589 dbSNP
rs372579050 1589 dbSNP
rs1031411728 1594 dbSNP
rs972195067 1598 dbSNP
rs971511286 1599 dbSNP
rs907219264 1600 dbSNP
rs1156611520 1607 dbSNP
rs1359714045 1608 dbSNP
rs557016571 1609 dbSNP
rs946318003 1612 dbSNP
rs892079626 1613 dbSNP
rs1446657004 1614 dbSNP
rs544731787 1621 dbSNP
rs958741932 1622 dbSNP
rs936224340 1624 dbSNP
rs577779329 1626 dbSNP
rs1384287323 1628 dbSNP
rs1353496104 1630 dbSNP
rs1235591069 1631 dbSNP
rs1283121401 1632 dbSNP
rs1209493899 1637 dbSNP
rs756312264 1638 dbSNP
rs1233595055 1642 dbSNP
rs779888203 1643 dbSNP
rs911373212 1644 dbSNP
rs1455514351 1645 dbSNP
rs1346084923 1650 dbSNP
rs879290090 1651 dbSNP
rs967437827 1655 dbSNP
rs933689029 1657 dbSNP
rs1474070653 1660 dbSNP
rs143703406 1661 dbSNP
rs972363133 1666 dbSNP
rs1188508305 1667 dbSNP
rs181685903 1669 dbSNP
rs1330287970 1672 dbSNP
rs1376571024 1673 dbSNP
rs143675760 1675 dbSNP
rs748209593 1678 dbSNP
rs1343491627 1679 dbSNP
rs909822759 1679 dbSNP
rs984440921 1680 dbSNP
rs1485982063 1681 dbSNP
rs1196942052 1682 dbSNP
rs1272077486 1682 dbSNP
rs1007853271 1686 dbSNP
rs959267850 1687 dbSNP
rs374592145 1689 dbSNP
rs781301637 1690 dbSNP
rs1420962053 1691 dbSNP
rs1463631513 1691 dbSNP
rs1295527928 1692 dbSNP
rs1394750001 1693 dbSNP
rs1442738757 1693 dbSNP
rs1325911163 1696 dbSNP
rs971427999 1698 dbSNP
rs1246139898 1699 dbSNP
rs1024333133 1701 dbSNP
rs1271317892 1706 dbSNP
rs1342377219 1708 dbSNP
rs1216892700 1709 dbSNP
rs1335719153 1713 dbSNP
rs1215831620 1715 dbSNP
rs1293520237 1716 dbSNP
rs1384053706 1720 dbSNP
rs1010219307 1721 dbSNP
rs1193755886 1723 dbSNP
rs529964238 1725 dbSNP
rs755596154 1725 dbSNP
rs138113844 1730 dbSNP
rs919021461 1731 dbSNP
rs190182521 1732 dbSNP
rs889964785 1735 dbSNP
rs1388976444 1737 dbSNP
rs1049898325 1738 dbSNP
rs1058927 1739 dbSNP
rs140765804 1739 dbSNP
rs1277609197 1740 dbSNP
rs200855911 1740 dbSNP
rs369507650 1740 dbSNP
rs181479422 1741 dbSNP
rs1247195272 1742 dbSNP
rs796559801 1742 dbSNP
rs1396378307 1743 dbSNP
rs6484 1743 dbSNP
rs148152436 1744 dbSNP
rs1215872846 1746 dbSNP
rs533226626 1749 dbSNP
rs146972299 1750 dbSNP
rs1367545344 1752 dbSNP
rs554098607 1755 dbSNP
rs909530470 1756 dbSNP
rs14124 1757 dbSNP
rs562353726 1758 dbSNP
rs1251874130 1762 dbSNP
rs1376103942 1764 dbSNP
rs757282884 1769 dbSNP
rs1058929 1770 dbSNP
rs1240080688 1772 dbSNP
rs1275406748 1773 dbSNP
rs933921272 1776 dbSNP
rs1020398180 1777 dbSNP
rs1280966338 1781 dbSNP
rs1483915730 1786 dbSNP
rs1198222071 1787 dbSNP
rs1254952270 1788 dbSNP
rs1438013352 1794 dbSNP
rs1183594101 1795 dbSNP
rs376766472 1799 dbSNP
rs750747953 1800 dbSNP
rs1438260727 1805 dbSNP
rs965912138 1809 dbSNP
rs1019183801 1815 dbSNP
rs1396223712 1816 dbSNP
rs1230270482 1817 dbSNP
rs1010270180 1818 dbSNP
rs772646919 1818 dbSNP
rs1401650242 1820 dbSNP
rs1302829763 1821 dbSNP
rs386384177 1824 dbSNP
rs80296983 1824 dbSNP
rs1373548023 1825 dbSNP
rs1007512699 1828 dbSNP
rs1313880362 1829 dbSNP
rs1326314417 1829 dbSNP
rs956074807 1829 dbSNP
rs1231024215 1836 dbSNP
rs530531745 1838 dbSNP
rs1048939544 1844 dbSNP
rs764825039 1846 dbSNP
rs890007260 1847 dbSNP
rs1235982347 1848 dbSNP
rs994482529 1849 dbSNP
rs1049992053 1852 dbSNP
rs761492026 1853 dbSNP
rs141454207 1858 dbSNP
rs542192201 1862 dbSNP
rs573450856 1863 dbSNP
rs776053335 1864 dbSNP
rs901338306 1865 dbSNP
rs897458206 1869 dbSNP
rs1455305095 1873 dbSNP
rs545105166 1874 dbSNP
rs763580615 1875 dbSNP
rs1173027357 1878 dbSNP
rs949832362 1880 dbSNP
rs939730253 1882 dbSNP
rs1465364659 1885 dbSNP
rs917464327 1886 dbSNP
rs1326301708 1887 dbSNP
rs1369522381 1890 dbSNP
rs1384953780 1891 dbSNP
rs909551154 1892 dbSNP
rs9953 1893 dbSNP
rs1255669880 1894 dbSNP
rs1316915459 1902 dbSNP
rs1048508927 1904 dbSNP
rs937954333 1905 dbSNP
rs926567246 1906 dbSNP
rs1267291752 1909 dbSNP
rs1478470034 1910 dbSNP
rs937637075 1912 dbSNP
rs1421632255 1916 dbSNP
rs1477603976 1919 dbSNP
rs71377190 1929 dbSNP
rs1248887811 1935 dbSNP
rs781381170 1936 dbSNP
rs926205065 1938 dbSNP
rs988859708 1940 dbSNP
rs1385562516 1943 dbSNP
rs1657067 1944 dbSNP
rs540813987 1947 dbSNP
rs1314437700 1948 dbSNP
rs1350157066 1951 dbSNP
rs979200706 1952 dbSNP
rs1219814265 1953 dbSNP
rs570969505 1957 dbSNP
rs1488887479 1958 dbSNP
rs1238639545 1960 dbSNP
rs1219499920 1963 dbSNP
rs555237180 1967 dbSNP
rs1330704776 1968 dbSNP
rs1182593868 1971 dbSNP
rs536898237 1974 dbSNP
rs965840826 1977 dbSNP
rs1015730077 1978 dbSNP
rs570039485 1979 dbSNP
rs552540414 1982 dbSNP
rs888162053 1984 dbSNP
rs1058967 1985 dbSNP
rs1414882446 2005 dbSNP
rs1304141359 2007 dbSNP
rs879237496 2013 dbSNP
rs1157593605 2022 dbSNP
rs937715920 2024 dbSNP
rs567061154 2025 dbSNP
rs539943821 2027 dbSNP
rs1184506223 2031 dbSNP
rs9929222 2033 dbSNP
rs1257355522 2035 dbSNP
rs1209355139 2039 dbSNP
rs897529890 2040 dbSNP
rs548044421 2041 dbSNP
rs1014029235 2043 dbSNP
rs1223413793 2045 dbSNP
rs1181546256 2047 dbSNP
rs1441320905 2052 dbSNP
rs748384466 2054 dbSNP
rs750855754 2060 dbSNP
rs1055520041 2062 dbSNP
rs781189996 2064 dbSNP
rs536053601 2065 dbSNP
rs1354597068 2066 dbSNP
rs1043335573 2067 dbSNP
rs946271760 2069 dbSNP
rs954059643 2072 dbSNP
rs1220352193 2073 dbSNP
rs1280799369 2074 dbSNP
rs1028293495 2079 dbSNP
rs765632588 2080 dbSNP
rs568623742 2081 dbSNP
rs1459305682 2082 dbSNP
rs1291288904 2084 dbSNP
rs1176545972 2089 dbSNP
rs1237389742 2090 dbSNP
rs1416581450 2096 dbSNP
rs1359212635 2097 dbSNP
rs1192876367 2099 dbSNP
rs1422394588 2102 dbSNP
rs1413413032 2103 dbSNP
rs913273210 2110 dbSNP
rs977137155 2112 dbSNP
rs76623598 2113 dbSNP
rs780726763 2114 dbSNP
rs1058982 2117 dbSNP
rs1437746098 2119 dbSNP
rs150094894 2122 dbSNP
rs1417630239 2124 dbSNP
rs1365509545 2125 dbSNP
rs1186362278 2131 dbSNP
rs953223876 2132 dbSNP
rs763623371 2133 dbSNP
rs1320236632 2134 dbSNP
rs973334136 2134 dbSNP
rs188987611 2135 dbSNP
rs1452001016 2137 dbSNP
rs1223585958 2138 dbSNP
rs1244920311 2139 dbSNP
rs551071347 2140 dbSNP
rs1477687861 2142 dbSNP
rs1286535884 2145 dbSNP
rs1014349932 2146 dbSNP
rs1333833120 2148 dbSNP
rs1476621985 2150 dbSNP
rs895458798 2157 dbSNP
rs1169547105 2163 dbSNP
rs1396144523 2164 dbSNP
rs1406333866 2165 dbSNP
rs1326014754 2168 dbSNP
rs1348641973 2172 dbSNP
rs1034515426 2174 dbSNP
rs1015781008 2175 dbSNP
rs1004815588 2177 dbSNP
rs375832290 2177 dbSNP
rs796089977 2177 dbSNP
rs147799869 2185 dbSNP
rs533084526 2185 dbSNP
rs549147544 2197 dbSNP
rs540871040 2198 dbSNP
rs186124983 2200 dbSNP
rs1450932288 2202 dbSNP
rs1269064962 2204 dbSNP
rs892067955 2206 dbSNP
rs1327682677 2207 dbSNP
rs1046024369 2212 dbSNP
rs1041278702 2215 dbSNP
rs1293184971 2218 dbSNP
rs1473613443 2219 dbSNP
rs1165332621 2220 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gauACCCACCCUGUCUCUCcc 5'
             |||| |||:::|||||  
Target 5' --uUGGGAGGGGUGGAGAG-- 3'
1 - 17
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000396593.2 | 3UTR | UUGGGAGGGGUGGAGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
209 hsa-miR-6769b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT181753 UHMK1 U2AF homology motif kinase 1 2 2
MIRT287119 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT395372 CDC42EP4 CDC42 effector protein 4 2 4
MIRT472533 NACC1 nucleus accumbens associated 1 2 4
MIRT472611 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT482405 ADRB1 adrenoceptor beta 1 2 10
MIRT492330 SETD1B SET domain containing 1B 2 2
MIRT499238 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT512274 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT534548 RUNX1 runt related transcription factor 1 2 2
MIRT535374 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT535424 PDZD8 PDZ domain containing 8 2 2
MIRT539329 AHSA2 activator of HSP90 ATPase homolog 2 2 4
MIRT569350 EFHC1 EF-hand domain containing 1 2 2
MIRT576116 Klf6 Kruppel-like factor 6 2 2
MIRT607241 LINS lines homolog 1 2 4
MIRT607364 ASAH2 N-acylsphingosine amidohydrolase 2 2 4
MIRT609572 CATSPER4 cation channel sperm associated 4 2 2
MIRT610045 SERPINA3 serpin family A member 3 2 2
MIRT610284 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT610302 KLHL21 kelch like family member 21 2 2
MIRT610393 FOXE1 forkhead box E1 2 2
MIRT610432 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610510 BARHL2 BarH like homeobox 2 2 2
MIRT611818 FCRL4 Fc receptor like 4 2 2
MIRT612755 MYOCD myocardin 2 2
MIRT613698 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613917 POU3F1 POU class 3 homeobox 1 2 2
MIRT615153 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 2
MIRT615201 CLUAP1 clusterin associated protein 1 2 2
MIRT615338 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT616706 UBXN2A UBX domain protein 2A 2 2
MIRT617186 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617526 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617596 NUDT5 nudix hydrolase 5 2 4
MIRT617763 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618613 SHOX short stature homeobox 2 2
MIRT619301 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619515 TXLNB taxilin beta 2 2
MIRT619925 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT619942 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620025 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620554 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620752 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT621798 TMEM233 transmembrane protein 233 2 2
MIRT621843 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT622693 PLSCR1 phospholipid scramblase 1 2 2
MIRT622733 PITPNM3 PITPNM family member 3 2 2
MIRT623004 ONECUT3 one cut homeobox 3 2 2
MIRT623211 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623771 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT624119 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624150 DIAPH1 diaphanous related formin 1 2 2
MIRT624443 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT624855 ABI2 abl interactor 2 2 2
MIRT625311 SHISA6 shisa family member 6 2 2
MIRT625741 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT626292 ZNF85 zinc finger protein 85 2 2
MIRT627400 TMEM170A transmembrane protein 170A 2 2
MIRT627464 SYNRG synergin gamma 2 2
MIRT627913 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT636508 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT636910 KIAA0408 KIAA0408 2 2
MIRT637302 ACTN2 actinin alpha 2 2 2
MIRT638230 SOGA3 SOGA family member 3 2 2
MIRT639880 STC1 stanniocalcin 1 2 2
MIRT639999 PHF21B PHD finger protein 21B 2 2
MIRT640149 CEP104 centrosomal protein 104 2 2
MIRT640699 SKI SKI proto-oncogene 2 2
MIRT640911 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641518 CREBBP CREB binding protein 2 2
MIRT641990 OXSR1 oxidative stress responsive 1 2 2
MIRT642635 EPPIN epididymal peptidase inhibitor 2 2
MIRT642744 TDRD6 tudor domain containing 6 2 2
MIRT642759 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT642787 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643054 EPPIN-WFDC6 EPPIN-WFDC6 readthrough 2 2
MIRT643104 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643316 TMEM151B transmembrane protein 151B 2 2
MIRT643715 ITK IL2 inducible T-cell kinase 2 2
MIRT644087 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT644112 SEL1L3 SEL1L family member 3 2 2
MIRT644377 ZNF286A zinc finger protein 286A 2 2
MIRT644408 FRMD6 FERM domain containing 6 2 2
MIRT644684 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT644744 CCDC174 coiled-coil domain containing 174 2 2
MIRT644876 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT645417 FAM110A family with sequence similarity 110 member A 2 2
MIRT645928 PLXNA3 plexin A3 2 2
MIRT646181 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646554 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT647235 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647263 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647660 FOXL1 forkhead box L1 2 2
MIRT648284 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT648493 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT648963 TMEM45B transmembrane protein 45B 2 2
MIRT649511 RAB17 RAB17, member RAS oncogene family 2 2
MIRT650446 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650712 KRT32 keratin 32 2 2
MIRT651069 ZNF518B zinc finger protein 518B 2 4
MIRT651090 ZNF516 zinc finger protein 516 2 2
MIRT651193 ZNF281 zinc finger protein 281 2 2
MIRT651330 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651445 XKR4 XK related 4 2 2
MIRT651517 WNT4 Wnt family member 4 2 4
MIRT651694 VPS13D vacuolar protein sorting 13 homolog D 2 2
MIRT652173 TRIM66 tripartite motif containing 66 2 2
MIRT652432 TMEM239 transmembrane protein 239 2 2
MIRT652656 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT652707 THBS2 thrombospondin 2 2 2
MIRT652812 TBL2 transducin beta like 2 2 2
MIRT653350 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653471 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT653658 SLC27A4 solute carrier family 27 member 4 2 2
MIRT654691 PSMB5 proteasome subunit beta 5 2 2
MIRT654735 PRLR prolactin receptor 2 2
MIRT654931 POLR3D RNA polymerase III subunit D 2 2
MIRT655209 PHAX phosphorylated adaptor for RNA export 2 2
MIRT655346 PCP4L1 Purkinje cell protein 4 like 1 2 2
MIRT655404 PANK1 pantothenate kinase 1 2 2
MIRT655482 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT655964 NDNF neuron derived neurotrophic factor 2 2
MIRT656017 MYPN myopalladin 2 2
MIRT656491 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657151 ITGA1 integrin subunit alpha 1 2 2
MIRT657411 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657608 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT658181 FBXO9 F-box protein 9 2 2
MIRT658932 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659028 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659092 DENR density regulated re-initiation and release factor 2 2
MIRT659204 CYBB cytochrome b-245 beta chain 2 2
MIRT659718 CCDC93 coiled-coil domain containing 93 2 2
MIRT660185 BNC2 basonuclin 2 2 2
MIRT660805 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT660900 ADCY6 adenylate cyclase 6 2 2
MIRT660925 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT661741 DTHD1 death domain containing 1 2 2
MIRT661998 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT662639 PKHD1L1 PKHD1 like 1 2 2
MIRT664338 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT666743 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT667070 PANK3 pantothenate kinase 3 2 2
MIRT667925 IGLON5 IgLON family member 5 2 2
MIRT668488 ETV3 ETS variant 3 2 2
MIRT668610 EHD4 EH domain containing 4 2 2
MIRT669419 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669652 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT674005 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT680447 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT684326 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT685625 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT689978 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT693962 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT698543 TFRC transferrin receptor 2 2
MIRT699982 RREB1 ras responsive element binding protein 1 2 2
MIRT702898 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT707383 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708312 CDH8 cadherin 8 2 2
MIRT708406 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT709299 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710326 STK40 serine/threonine kinase 40 2 2
MIRT710729 C19orf68 zinc finger SWIM-type containing 9 2 2
MIRT710970 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711178 EMCN endomucin 2 2
MIRT711590 SETD1A SET domain containing 1A 2 2
MIRT711611 LHX5 LIM homeobox 5 2 2
MIRT711701 GMPR guanosine monophosphate reductase 2 2
MIRT711850 AMOTL2 angiomotin like 2 2 2
MIRT712358 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT712377 MTPN myotrophin 2 2
MIRT712469 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712839 RHOA ras homolog family member A 2 2
MIRT713592 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713982 ASIC4 acid sensing ion channel subunit family member 4 2 2
MIRT714534 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714570 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714610 EXO5 exonuclease 5 2 2
MIRT714943 ZNF330 zinc finger protein 330 2 2
MIRT715132 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT716018 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716204 TYW3 tRNA-yW synthesizing protein 3 homolog 2 2
MIRT716674 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT717366 EDN2 endothelin 2 2 2
MIRT718110 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718502 GYS1 glycogen synthase 1 2 2
MIRT719146 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719415 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719986 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720347 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720452 SLC16A5 solute carrier family 16 member 5 2 2
MIRT720493 TMEM178B transmembrane protein 178B 2 2
MIRT720666 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT721091 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721334 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT721384 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721508 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721827 POU6F1 POU class 6 homeobox 1 2 2
MIRT722136 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT723070 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 2 2
MIRT723115 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT723374 ZNF470 zinc finger protein 470 2 2
MIRT724446 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT724528 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT724643 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT724711 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT724750 ZNF391 zinc finger protein 391 2 2
MIRT724770 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6769b Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-6769b Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-6769b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6769b-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-6769b-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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