pre-miRNA Information
pre-miRNA hsa-mir-6819   
Genomic Coordinates chr22: 36286847 - 36286907
Description Homo sapiens miR-6819 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6819-3p
Sequence 41| AAGCCUCUGUCCCCACCCCAG |61
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1279530967 2 dbSNP
rs967579979 3 dbSNP
rs776891214 4 dbSNP
rs771166635 8 dbSNP
rs747037324 9 dbSNP
rs879248090 11 dbSNP
rs1485325191 12 dbSNP
rs778157316 16 dbSNP
Putative Targets

Gene Information
Gene Symbol DKK3   
Synonyms REIC, RIG
Description dickkopf WNT signaling pathway inhibitor 3
Transcript NM_001018057   
Other Transcripts NM_013253 , NM_015881   
Expression
Putative miRNA Targets on DKK3
3'UTR of DKK3
(miRNA target sites are highlighted)
>DKK3|NM_001018057|3'UTR
   1 ATCTGGACCAGGCTGTGGGTAGATGTGCAATAGAAATAGCTAATTTATTTCCCCAGGTGTGTGCTTTAGGCGTGGGCTGA
  81 CCAGGCTTCTTCCTACATCTTCTTCCCAGTAAGTTTCCCCTCTGGCTTGACAGCATGAGGTGTTGTGCATTTGTTCAGCT
 161 CCCCCAGGCTGTTCTCCAGGCTTCACAGTCTGGTGCTTGGGAGAGTCAGGCAGGGTTAAACTGCAGGAGCAGTTTGCCAC
 241 CCCTGTCCAGATTATTGGCTGCTTTGCCTCTACCAGTTGGCAGACAGCCGTTTGTTCTACATGGCTTTGATAATTGTTTG
 321 AGGGGAGGAGATGGAAACAATGTGGAGTCTCCCTCTGATTGGTTTTGGGGAAATGTGGAGAAGAGTGCCCTGCTTTGCAA
 401 ACATCAACCTGGCAAAAATGCAACAAATGAATTTTCCACGCAGTTCTTTCCATGGGCATAGGTAAGCTGTGCCTTCAGCT
 481 GTTGCAGATGAAATGTTCTGTTCACCCTGCATTACATGTGTTTATTCATCCAGCAGTGTTGCTCAGCTCCTACCTCTGTG
 561 CCAGGGCAGCATTTTCATATCCAAGATCAATTCCCTCTCTCAGCACAGCCTGGGGAGGGGGTCATTGTTCTCCTCGTCCA
 641 TCAGGGATCTCAGAGGCTCAGAGACTGCAAGCTGCTTGCCCAAGTCACACAGCTAGTGAAGACCAGAGCAGTTTCATCTG
 721 GTTGTGACTCTAAGCTCAGTGCTCTCTCCACTACCCCACACCAGCCTTGGTGCCACCAAAAGTGCTCCCCAAAAGGAAGG
 801 AGAATGGGATTTTTCTTTTGAGGCATGCACATCTGGAATTAAGGTCAAACTAATTCTCACATCCCTCTAAAAGTAAACTA
 881 CTGTTAGGAACAGCAGTGTTCTCACAGTGTGGGGCAGCCGTCCTTCTAATGAAGACAATGATATTGACACTGTCCCTCTT
 961 TGGCAGTTGCATTAGTAACTTTGAAAGGTATATGACTGAGCGTAGCATACAGGTTAACCTGCAGAAACAGTACTTAGGTA
1041 ATTGTAGGGCGAGGATTATAAATGAAATTTGCAAAATCACTTAGCAGCAACTGAAGACAATTATCAACCACGTGGAGAAA
1121 ATCAAACCGAGCAGGGCTGTGTGAAACATGGTTGTAATATGCGACTGCGAACACTGAACTCTACGCCACTCCACAAATGA
1201 TGTTTTCAGGTGTCATGGACTGTTGCCACCATGTATTCATCCAGAGTTCTTAAAGTTTAAAGTTGCACATGATTGTATAA
1281 GCATGCTTTCTTTGAGTTTTAAATTATGTATAAACATAAGTTGCATTTAGAAATCAAGCATAAATCACTTCAACTGCTCT
1361 TCTGTAGTTCTTGGATTTCTTTTCCCTTTTGACTTTGAATAAATGTAAAATCCTTTCAGCCAGAAAAAGTAAAATAGAAA
1441 CAACCTGTATTAAAAATCTTCCATAGAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaccccacCCCU---GUCUCCGAa 5'
                  ||||   |||||||| 
Target 5' gtccatcaGGGATCTCAGAGGCTc 3'
636 - 659 153.00 -17.70
2
miRNA  3' gaCCC----CACCCCUGUCUC-CGaa 5'
            |||    |||| || |||| ||  
Target 5' tgGGGAAATGTGGAGA-AGAGTGCcc 3'
366 - 390 108.00 -16.80
3
miRNA  3' gaccccACCCCUGUCUCCGAa 5'
                |||||  ||:|| | 
Target 5' acagccTGGGG--AGGGGGTc 3'
605 - 623 107.00 -20.47
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN16129119 27 COSMIC
COSN23013352 28 COSMIC
COSN26973464 33 COSMIC
COSN31564388 37 COSMIC
COSN30180766 42 COSMIC
COSN30115220 43 COSMIC
COSN30186982 56 COSMIC
COSN26973463 73 COSMIC
COSN30144862 77 COSMIC
COSN31497910 87 COSMIC
COSN5297669 96 COSMIC
COSN30454166 111 COSMIC
COSN30456653 118 COSMIC
COSN6988560 126 COSMIC
COSN31553900 133 COSMIC
COSN31505047 148 COSMIC
COSN28192556 150 COSMIC
COSN30465893 161 COSMIC
COSN30465887 162 COSMIC
COSN30461401 179 COSMIC
COSN24998628 361 COSMIC
COSN1516106 485 COSMIC
COSN1127668 489 COSMIC
COSN31557616 661 COSMIC
COSN20107984 868 COSMIC
COSN6988557 1050 COSMIC
COSN31483223 1179 COSMIC
COSN31591446 1305 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs755208078 1 dbSNP
rs751797364 2 dbSNP
rs115387703 5 dbSNP
rs763132119 9 dbSNP
rs1206202632 11 dbSNP
rs116954853 12 dbSNP
rs765865659 14 dbSNP
rs1322838278 17 dbSNP
rs1195810962 19 dbSNP
rs778069727 20 dbSNP
rs1287386914 21 dbSNP
rs892985878 22 dbSNP
rs762365940 23 dbSNP
rs376217112 29 dbSNP
rs1056318916 31 dbSNP
rs769041396 38 dbSNP
rs937891607 47 dbSNP
rs1455319799 48 dbSNP
rs746697386 51 dbSNP
rs998683477 71 dbSNP
rs1455190967 72 dbSNP
rs1348575874 73 dbSNP
rs563142173 80 dbSNP
rs1385833424 82 dbSNP
rs1051002292 84 dbSNP
rs1299691039 91 dbSNP
rs997860342 92 dbSNP
rs1337878874 93 dbSNP
rs1240463193 106 dbSNP
rs543465113 109 dbSNP
rs991645745 109 dbSNP
rs1231853275 111 dbSNP
rs1273838832 138 dbSNP
rs908604989 141 dbSNP
rs982866193 142 dbSNP
rs899460663 145 dbSNP
rs1182176046 146 dbSNP
rs568957801 165 dbSNP
rs1471538515 168 dbSNP
rs1296584840 169 dbSNP
rs1166502737 173 dbSNP
rs1381808695 181 dbSNP
rs529692888 186 dbSNP
rs941078143 195 dbSNP
rs1304734792 203 dbSNP
rs1457135286 208 dbSNP
rs909619666 211 dbSNP
rs1049718503 212 dbSNP
rs929487076 216 dbSNP
rs1375425171 225 dbSNP
rs1392341902 232 dbSNP
rs561001601 238 dbSNP
rs1029803634 243 dbSNP
rs1349199948 244 dbSNP
rs1235639053 245 dbSNP
rs1432052018 245 dbSNP
rs981624011 249 dbSNP
rs1391120341 258 dbSNP
rs541113060 261 dbSNP
rs971372112 268 dbSNP
rs572195333 271 dbSNP
rs964287254 276 dbSNP
rs1017304712 285 dbSNP
rs1482053801 287 dbSNP
rs1000926946 289 dbSNP
rs180685666 290 dbSNP
rs1183147223 307 dbSNP
rs1021136300 321 dbSNP
rs1374453092 334 dbSNP
rs957712704 342 dbSNP
rs1307842772 347 dbSNP
rs756673172 350 dbSNP
rs1369063708 355 dbSNP
rs1485692957 357 dbSNP
rs1417217606 362 dbSNP
rs1314010568 367 dbSNP
rs999130857 369 dbSNP
rs896325861 378 dbSNP
rs1297752718 389 dbSNP
rs1475403674 395 dbSNP
rs1308330185 400 dbSNP
rs1227902355 402 dbSNP
rs1273705992 403 dbSNP
rs1339786157 407 dbSNP
rs1344055556 411 dbSNP
rs1237993521 417 dbSNP
rs967171593 420 dbSNP
rs1029589194 426 dbSNP
rs998079596 428 dbSNP
rs111466220 433 dbSNP
rs937961919 439 dbSNP
rs1449741454 440 dbSNP
rs1167548406 447 dbSNP
rs1388771463 455 dbSNP
rs1226417624 457 dbSNP
rs1039805774 461 dbSNP
rs1174591084 466 dbSNP
rs1005200094 469 dbSNP
rs781182627 472 dbSNP
rs866440010 491 dbSNP
rs1354858672 495 dbSNP
rs1290747101 504 dbSNP
rs1362721836 504 dbSNP
rs529605021 512 dbSNP
rs1412160110 516 dbSNP
rs1373387310 524 dbSNP
rs1236241018 525 dbSNP
rs1279015657 534 dbSNP
rs1311568157 541 dbSNP
rs929483215 544 dbSNP
rs941379180 546 dbSNP
rs1397828709 551 dbSNP
rs757360565 556 dbSNP
rs1464947732 570 dbSNP
rs1187614337 580 dbSNP
rs575949655 588 dbSNP
rs751760580 609 dbSNP
rs188439232 615 dbSNP
rs950272496 617 dbSNP
rs1192168933 619 dbSNP
rs1460766879 622 dbSNP
rs769818616 622 dbSNP
rs1413311893 633 dbSNP
rs547174692 635 dbSNP
rs934025764 636 dbSNP
rs536278976 640 dbSNP
rs1318561340 643 dbSNP
rs1441871949 645 dbSNP
rs957388735 646 dbSNP
rs754774401 651 dbSNP
rs1366617558 662 dbSNP
rs186387336 668 dbSNP
rs1185720016 671 dbSNP
rs964318305 673 dbSNP
rs977495740 678 dbSNP
rs554019287 689 dbSNP
rs1207580472 704 dbSNP
rs1029473168 711 dbSNP
rs979008190 714 dbSNP
rs1246545345 721 dbSNP
rs998005906 723 dbSNP
rs1020578933 728 dbSNP
rs1413366127 730 dbSNP
rs1157079848 737 dbSNP
rs1472524678 737 dbSNP
rs963979793 740 dbSNP
rs534302111 744 dbSNP
rs1406222125 749 dbSNP
rs896231431 751 dbSNP
rs1267488992 752 dbSNP
rs1349157852 755 dbSNP
rs1018187927 757 dbSNP
rs182001705 759 dbSNP
rs1005663885 765 dbSNP
rs138940704 767 dbSNP
rs1351062715 770 dbSNP
rs1227674232 773 dbSNP
rs1291585537 775 dbSNP
rs904999571 776 dbSNP
rs118111563 778 dbSNP
rs993853120 783 dbSNP
rs1288703792 790 dbSNP
rs1449460216 798 dbSNP
rs1038708982 805 dbSNP
rs941255218 808 dbSNP
rs898008781 818 dbSNP
rs1483038393 823 dbSNP
rs753645667 830 dbSNP
rs1420190048 847 dbSNP
rs1242360240 850 dbSNP
rs1473166418 852 dbSNP
rs1162671925 853 dbSNP
rs1336919651 858 dbSNP
rs569599830 861 dbSNP
rs887112724 862 dbSNP
rs1047092576 872 dbSNP
rs199949466 873 dbSNP
rs142843448 878 dbSNP
rs71720144 878 dbSNP
rs749842345 878 dbSNP
rs200966495 880 dbSNP
rs922669160 885 dbSNP
rs549682860 919 dbSNP
rs1327514663 926 dbSNP
rs1283040462 928 dbSNP
rs942865117 930 dbSNP
rs529756397 938 dbSNP
rs1461576676 941 dbSNP
rs565019537 942 dbSNP
rs1275859807 951 dbSNP
rs1341887417 954 dbSNP
rs189543796 956 dbSNP
rs979425513 958 dbSNP
rs1260238489 968 dbSNP
rs185027615 975 dbSNP
rs1186967744 984 dbSNP
rs1056019066 988 dbSNP
rs913591106 996 dbSNP
rs1235773782 1001 dbSNP
rs527392517 1002 dbSNP
rs925954199 1033 dbSNP
rs1390630338 1038 dbSNP
rs760620074 1042 dbSNP
rs533777787 1050 dbSNP
rs113166794 1051 dbSNP
rs1414931856 1054 dbSNP
rs946142572 1058 dbSNP
rs922662841 1064 dbSNP
rs1034747684 1066 dbSNP
rs1338168743 1067 dbSNP
rs976620486 1068 dbSNP
rs1269132714 1076 dbSNP
rs969637581 1077 dbSNP
rs1468248693 1083 dbSNP
rs1016730309 1086 dbSNP
rs1226669165 1092 dbSNP
rs1258091491 1095 dbSNP
rs193161422 1102 dbSNP
rs963903880 1104 dbSNP
rs1346371684 1110 dbSNP
rs1271480908 1111 dbSNP
rs189373475 1113 dbSNP
rs1448809063 1114 dbSNP
rs1189221556 1122 dbSNP
rs1351442644 1125 dbSNP
rs1260675334 1128 dbSNP
rs150645922 1129 dbSNP
rs1186480283 1133 dbSNP
rs1047122757 1134 dbSNP
rs1466533847 1135 dbSNP
rs952500175 1136 dbSNP
rs1333193399 1140 dbSNP
rs564961863 1141 dbSNP
rs1304712883 1147 dbSNP
rs573551503 1149 dbSNP
rs376451553 1155 dbSNP
rs8169 1157 dbSNP
rs906313722 1158 dbSNP
rs942760847 1160 dbSNP
rs926153396 1162 dbSNP
rs1024674937 1163 dbSNP
rs1014385634 1168 dbSNP
rs141908463 1169 dbSNP
rs578064386 1173 dbSNP
rs913463977 1174 dbSNP
rs936238968 1182 dbSNP
rs1451457213 1183 dbSNP
rs148107171 1184 dbSNP
rs904761506 1185 dbSNP
rs1041764613 1186 dbSNP
rs538172611 1191 dbSNP
rs993014815 1199 dbSNP
rs960372249 1203 dbSNP
rs946028014 1216 dbSNP
rs1043179 1228 dbSNP
rs1337373303 1229 dbSNP
rs768258704 1237 dbSNP
rs1159306694 1239 dbSNP
rs976797331 1241 dbSNP
rs927601845 1242 dbSNP
rs1453537911 1252 dbSNP
rs980493805 1255 dbSNP
rs1386576721 1256 dbSNP
rs1251402306 1265 dbSNP
rs1352895936 1267 dbSNP
rs942529603 1269 dbSNP
rs1190701431 1273 dbSNP
rs1327148167 1275 dbSNP
rs1247343640 1277 dbSNP
rs538475540 1278 dbSNP
rs569465853 1281 dbSNP
rs758612049 1294 dbSNP
rs1017215765 1299 dbSNP
rs549745571 1303 dbSNP
rs1484021752 1307 dbSNP
rs984457118 1309 dbSNP
rs1410665103 1315 dbSNP
rs1471324178 1320 dbSNP
rs1005373414 1325 dbSNP
rs1347820997 1330 dbSNP
rs536160257 1333 dbSNP
rs1457060959 1335 dbSNP
rs1281641945 1337 dbSNP
rs1372777017 1338 dbSNP
rs749650253 1350 dbSNP
rs1411037562 1360 dbSNP
rs567014829 1363 dbSNP
rs1025585956 1364 dbSNP
rs1349103154 1364 dbSNP
rs1300840315 1375 dbSNP
rs1313473034 1381 dbSNP
rs1321384592 1384 dbSNP
rs1242850990 1389 dbSNP
rs998074419 1403 dbSNP
rs1432388876 1404 dbSNP
rs952687659 1416 dbSNP
rs901176443 1423 dbSNP
rs1039724189 1424 dbSNP
rs1007418732 1429 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaccccACCCCUGUCUCCGAa 5'
                | | || ||||||| 
Target 5' ------UAGAGA-AGAGGCUa 3'
1 - 14
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000396505.2 | 3UTR | UAGAGAAGAGGCUAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
108 hsa-miR-6819-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT358318 PANK3 pantothenate kinase 3 2 2
MIRT454719 UBQLNL ubiquilin like 2 2
MIRT471362 PEG10 paternally expressed 10 2 2
MIRT478101 DLG5 discs large MAGUK scaffold protein 5 2 4
MIRT495554 GOLGA6L4 golgin A6 family-like 4 2 2
MIRT495587 GOLGA6L10 golgin A6 family-like 10 2 2
MIRT508315 RPL18 ribosomal protein L18 2 4
MIRT529183 ADAM33 ADAM metallopeptidase domain 33 2 2
MIRT532035 FHDC1 FH2 domain containing 1 2 2
MIRT545131 ANXA5 annexin A5 2 2
MIRT567288 HNRNPL heterogeneous nuclear ribonucleoprotein L 2 2
MIRT568094 CEBPG CCAAT/enhancer binding protein gamma 2 2
MIRT573291 DLX4 distal-less homeobox 4 2 2
MIRT575169 Fam120c family with sequence similarity 120, member C 2 2
MIRT609495 DNASE1L3 deoxyribonuclease 1 like 3 2 2
MIRT611264 EHD3 EH domain containing 3 2 2
MIRT613580 POC5 POC5 centriolar protein 2 2
MIRT616520 C9orf170 chromosome 9 open reading frame 170 2 2
MIRT617098 ZNF667 zinc finger protein 667 2 2
MIRT618268 DDX51 DEAD-box helicase 51 2 2
MIRT618294 ZNF682 zinc finger protein 682 2 2
MIRT618617 SHOX short stature homeobox 2 2
MIRT619741 SRFBP1 serum response factor binding protein 1 2 2
MIRT619784 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT621119 SP110 SP110 nuclear body protein 2 2
MIRT622530 RAD51 RAD51 recombinase 2 2
MIRT623088 NME6 NME/NM23 nucleoside diphosphate kinase 6 2 2
MIRT623938 FKBP14 FK506 binding protein 14 2 2
MIRT624389 CD84 CD84 molecule 2 2
MIRT624860 ABI2 abl interactor 2 2 2
MIRT628752 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT632243 VTA1 vesicle trafficking 1 2 2
MIRT632987 E2F2 E2F transcription factor 2 2 2
MIRT633695 RBM43 RNA binding motif protein 43 2 2
MIRT633766 CENPBD1 CENPB DNA-binding domain containing 1 2 2
MIRT633808 ZNF91 zinc finger protein 91 2 2
MIRT638914 CBLN2 cerebellin 2 precursor 2 2
MIRT641298 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT642123 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT642179 HEBP2 heme binding protein 2 2 2
MIRT642617 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT643325 TMEM151B transmembrane protein 151B 2 2
MIRT644534 TMEM134 transmembrane protein 134 2 2
MIRT645820 OMA1 OMA1 zinc metallopeptidase 2 2
MIRT646093 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646861 SLC35E4 solute carrier family 35 member E4 2 2
MIRT647466 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT647702 NADSYN1 NAD synthetase 1 2 2
MIRT648082 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT648547 TMEM169 transmembrane protein 169 2 2
MIRT648690 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT649747 GNB5 G protein subunit beta 5 2 2
MIRT650154 ZNF426 zinc finger protein 426 2 2
MIRT650450 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650943 CTNS cystinosin, lysosomal cystine transporter 2 2
MIRT651544 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT652304 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT652890 SYVN1 synoviolin 1 2 2
MIRT654222 RNF19B ring finger protein 19B 2 2
MIRT654676 PSMB5 proteasome subunit beta 5 2 2
MIRT658249 FAXC failed axon connections homolog 2 2
MIRT658363 FAM65B RHO family interacting cell polarization regulator 2 2 2
MIRT659622 CELF1 CUGBP Elav-like family member 1 2 2
MIRT660171 BNIP3L BCL2 interacting protein 3 like 2 2
MIRT660634 ANKRD52 ankyrin repeat domain 52 2 2
MIRT662428 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT662984 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT663939 ZNF554 zinc finger protein 554 2 2
MIRT666960 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT667945 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT668847 CYCS cytochrome c, somatic 2 2
MIRT671792 RGS17 regulator of G protein signaling 17 2 2
MIRT672382 RPL37 ribosomal protein L37 2 2
MIRT673516 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 4
MIRT674716 FAM73A mitoguardin 1 2 2
MIRT676352 KLF8 Kruppel like factor 8 2 2
MIRT677820 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT678440 PDE4C phosphodiesterase 4C 2 2
MIRT678499 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT679243 LRP10 LDL receptor related protein 10 2 2
MIRT693607 SLC39A1 solute carrier family 39 member 1 2 2
MIRT695927 ZNF174 zinc finger protein 174 2 2
MIRT697987 TSPAN6 tetraspanin 6 2 2
MIRT700821 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT701350 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT702348 KLHL7 kelch like family member 7 2 2
MIRT703387 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT703883 ERBB2IP erbb2 interacting protein 2 2
MIRT708237 PPP1R26 protein phosphatase 1 regulatory subunit 26 2 2
MIRT708629 NUDT18 nudix hydrolase 18 2 2
MIRT708990 CABP4 calcium binding protein 4 2 2
MIRT709804 FOXE1 forkhead box E1 2 2
MIRT710203 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT710248 VAMP1 vesicle associated membrane protein 1 2 2
MIRT710281 FGF1 fibroblast growth factor 1 2 2
MIRT712992 IRGQ immunity related GTPase Q 2 2
MIRT713887 MOB3A MOB kinase activator 3A 2 2
MIRT715600 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT715639 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT715686 FRK fyn related Src family tyrosine kinase 2 2
MIRT717053 WIZ widely interspaced zinc finger motifs 2 2
MIRT717611 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT721539 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT722096 SUSD1 sushi domain containing 1 2 2
MIRT722435 HRNR hornerin 2 2
MIRT722855 NEGR1 neuronal growth regulator 1 2 2
MIRT724621 SNAP25 synaptosome associated protein 25 2 2
MIRT724777 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6819 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6819-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6819-3p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-6819-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-6819-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-6819-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6819-3p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-6819-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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