pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CENPJ   
Synonyms BM032, CENP-J, CPAP, LAP, LIP1, MCPH6, SASS4, SCKL4, Sas-4
Description centromere protein J
Transcript NM_018451   
Expression
Putative miRNA Targets on CENPJ
3'UTR of CENPJ
(miRNA target sites are highlighted)
>CENPJ|NM_018451|3'UTR
   1 CGATCCTCATGTGATCATGAAGTAACAGTAACTGACTTTTTATGTTAAAAAATGTACATTTACTGTGGATTCTGTTTAAT
  81 TTATTGTGTATGTGTGGGGAAAAGATTGGATTCTAAAATAAAAGTTTACCCTGTGGCATCTTCATTTTTATATTCTTTGA
 161 AATGCAATGATAGCTCTCATTTATAATTCACTACCCTGTCTTTCAATAGACTAAGGAAAGCATTTTGACTGTTTAGAAAT
 241 TGTGTACAGGTTTTTACAGTAAGTGGGTGTGTTTATTGGTTAGAAATGGCTATAAAAAAAAACCAAGAAGTACAGGAAGT
 321 ACATCACCTAGATGTCCCACAGACACATCAGCCGTAGAGCACTGGACTTGTACAGAAGGTGTACTCAAGGAGTAAACACG
 401 TGTCTCTGTAGCCAAAATATTACTATGTTCAGTTAGTACCAAAATTAGACCATTTGATCTTCTACAGAGGATCATTAATT
 481 ATTATAACAGAATGGGAAGTTACAACAGTGGATGAATATAAATAGGTCACACACAACAGGTAGTAATCATGGTGAAGAGA
 561 AAGCAGTTATAACAAGGCTGACTTTGTAATGTAATGTCTCAAAATGGGATACTTGAGAGTGGAGGGGGGCATGAACGATG
 641 ACTAGCCAGTGTTAACCCATGGACCACAGCTACCCTGATGTTACCACAGTGAGATTACTGTAGCCTCATGGAAGCAAGAT
 721 GTCCCTGAAGGATGGGCAAGTCACTTACTTACTTACTTGTAAATTTATATAATAAATAATTACAGATTGGTCTAGATAGA
 801 CCTTACCTGTCACATATACTATGAATCAGGTTTTGTTAATGAAATCTATCAATTCCAGGTGACTTAACTGAATATGAAAA
 881 ATAAAACTTTTTGAAGAATATAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugcCGAUCACCUGGU-CCACUUCa 5'
             | ||||  |:|| ||||||| 
Target 5' acaGGTAGT-AATCATGGTGAAGa 3'
536 - 558 159.00 -17.30
2
miRNA  3' ugccGAUCACCU--GGUCCACUuca 5'
              ||| |  |  ||||||||   
Target 5' aaatCTA-TCAATTCCAGGTGActt 3'
842 - 865 116.00 -12.82
3
miRNA  3' ugCCGAUCACCUGGUCCACUUCa 5'
            || || | ||  : |||:|| 
Target 5' tgGGATACTTGA--GAGTGGAGg 3'
605 - 625 109.00 -10.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
881144 26 ClinVar
311605 86 ClinVar
311604 124 ClinVar
883514 206 ClinVar
311603 267 ClinVar
311602 292 ClinVar
311600 303 ClinVar
311601 303 ClinVar
311599 311 ClinVar
882726 316 ClinVar
311598 398 ClinVar
311597 404 ClinVar
311596 408 ClinVar
311595 464 ClinVar
311594 520 ClinVar
311593 541 ClinVar
881105 556 ClinVar
311592 569 ClinVar
311591 570 ClinVar
883467 593 ClinVar
311590 596 ClinVar
883466 623 ClinVar
311589 639 ClinVar
311588 684 ClinVar
883465 721 ClinVar
311587 759 ClinVar
311586 779 ClinVar
311585 783 ClinVar
311584 890 ClinVar
COSN31542523 1 COSMIC
COSN21264572 2 COSMIC
COSN8587411 2 COSMIC
COSN30176519 19 COSMIC
COSN30761032 47 COSMIC
COSN30111292 55 COSMIC
COSN30101902 56 COSMIC
COSN30167785 68 COSMIC
COSN30153894 72 COSMIC
COSN31571395 72 COSMIC
COSN30519306 76 COSMIC
COSN31497622 104 COSMIC
COSN30102255 109 COSMIC
COSN31591049 136 COSMIC
COSN20110436 294 COSMIC
COSN29455379 304 COSMIC
COSN20110432 305 COSMIC
COSN20110431 682 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs758698044 1 dbSNP
rs748322843 2 dbSNP
rs1162613988 8 dbSNP
rs1471747395 9 dbSNP
rs370679181 10 dbSNP
rs1182240758 12 dbSNP
rs1232605867 13 dbSNP
rs755289851 19 dbSNP
rs754406994 22 dbSNP
rs377181966 24 dbSNP
rs1468980088 25 dbSNP
rs372867684 26 dbSNP
rs779527384 26 dbSNP
rs1272578956 34 dbSNP
rs1445681439 34 dbSNP
rs1227142378 38 dbSNP
rs1231922764 39 dbSNP
rs991593015 39 dbSNP
rs749969436 40 dbSNP
rs947664964 42 dbSNP
rs745724973 43 dbSNP
rs766950774 43 dbSNP
rs1491096072 44 dbSNP
rs577663382 44 dbSNP
rs778780583 46 dbSNP
rs1172008649 58 dbSNP
rs1453153590 58 dbSNP
rs557622525 59 dbSNP
rs1408554943 67 dbSNP
rs1170243276 69 dbSNP
rs1359925138 74 dbSNP
rs746614905 79 dbSNP
rs1311068762 81 dbSNP
rs767157103 84 dbSNP
rs747303248 86 dbSNP
rs866878314 88 dbSNP
rs544135785 90 dbSNP
rs575073064 91 dbSNP
rs1212546672 93 dbSNP
rs41307599 93 dbSNP
rs555292612 102 dbSNP
rs1312351597 104 dbSNP
rs1212585970 106 dbSNP
rs1277834170 106 dbSNP
rs9318911 108 dbSNP
rs1244307692 118 dbSNP
rs1474732628 119 dbSNP
rs1186248977 123 dbSNP
rs886050097 124 dbSNP
rs1475965939 127 dbSNP
rs1455902201 131 dbSNP
rs1171989046 137 dbSNP
rs966818038 157 dbSNP
rs1420346927 167 dbSNP
rs1244287159 170 dbSNP
rs1320402766 171 dbSNP
rs1192323222 172 dbSNP
rs943970005 182 dbSNP
rs1021089785 184 dbSNP
rs912454642 189 dbSNP
rs1213903815 194 dbSNP
rs985427339 198 dbSNP
rs572860218 199 dbSNP
rs1336544825 202 dbSNP
rs1011088030 206 dbSNP
rs552883565 211 dbSNP
rs780831403 218 dbSNP
rs1339842672 224 dbSNP
rs1285780509 230 dbSNP
rs974601782 235 dbSNP
rs1017589589 237 dbSNP
rs1247857819 250 dbSNP
rs1470086482 255 dbSNP
rs147198592 263 dbSNP
rs886050096 267 dbSNP
rs1016204657 269 dbSNP
rs1008005676 273 dbSNP
rs1370322655 275 dbSNP
rs890541811 276 dbSNP
rs771835172 289 dbSNP
rs886050095 292 dbSNP
rs1160316003 293 dbSNP
rs1052242133 294 dbSNP
rs1400263919 296 dbSNP
rs993589684 301 dbSNP
rs1395194961 302 dbSNP
rs1369727869 303 dbSNP
rs138938177 303 dbSNP
rs886050094 303 dbSNP
rs1239339007 304 dbSNP
rs1280724076 308 dbSNP
rs1347899574 308 dbSNP
rs894845092 309 dbSNP
rs570499935 310 dbSNP
rs1470243274 311 dbSNP
rs796638364 311 dbSNP
rs1053440111 323 dbSNP
rs1410826367 326 dbSNP
rs1001052954 328 dbSNP
rs1458332013 328 dbSNP
rs1037562751 334 dbSNP
rs1422102894 339 dbSNP
rs902230359 344 dbSNP
rs1172313152 345 dbSNP
rs1454259472 351 dbSNP
rs565018686 351 dbSNP
rs745708528 353 dbSNP
rs1055463580 354 dbSNP
rs943832700 362 dbSNP
rs1462970614 363 dbSNP
rs1162462841 366 dbSNP
rs938309513 368 dbSNP
rs1049667034 371 dbSNP
rs1193670818 371 dbSNP
rs1489188066 373 dbSNP
rs928331736 380 dbSNP
rs1230757293 383 dbSNP
rs932581914 384 dbSNP
rs919944781 385 dbSNP
rs974086472 390 dbSNP
rs1273182905 391 dbSNP
rs11620289 398 dbSNP
rs186510850 399 dbSNP
rs1437497024 400 dbSNP
rs77868928 404 dbSNP
rs1259720331 406 dbSNP
rs989635117 406 dbSNP
rs1231965733 407 dbSNP
rs141666267 408 dbSNP
rs1304112027 412 dbSNP
rs1236529575 422 dbSNP
rs1169455779 425 dbSNP
rs1393805755 428 dbSNP
rs1371292982 430 dbSNP
rs1312882160 432 dbSNP
rs1297758746 438 dbSNP
rs1443290626 448 dbSNP
rs549323011 450 dbSNP
rs958304785 457 dbSNP
rs1013199967 459 dbSNP
rs957632769 460 dbSNP
rs1230023324 461 dbSNP
rs1249999739 464 dbSNP
rs886050093 464 dbSNP
rs1211878631 467 dbSNP
rs1282822846 477 dbSNP
rs764621249 478 dbSNP
rs1210302121 482 dbSNP
rs1484716922 482 dbSNP
rs1000512121 484 dbSNP
rs1255333579 484 dbSNP
rs145200221 484 dbSNP
rs1371131596 485 dbSNP
rs1474999205 486 dbSNP
rs749891534 486 dbSNP
rs1173861683 490 dbSNP
rs1356630084 493 dbSNP
rs1311483452 503 dbSNP
rs1434519014 504 dbSNP
rs554430802 508 dbSNP
rs1384437188 509 dbSNP
rs1293799992 515 dbSNP
rs560380766 518 dbSNP
rs547113186 520 dbSNP
rs536567537 527 dbSNP
rs1346026446 531 dbSNP
rs1434325773 539 dbSNP
rs533142063 541 dbSNP
rs1261397339 550 dbSNP
rs1176250895 551 dbSNP
rs1470337883 552 dbSNP
rs1259642749 554 dbSNP
rs188324716 556 dbSNP
rs1194070912 564 dbSNP
rs544072060 569 dbSNP
rs554027239 569 dbSNP
rs1363882895 570 dbSNP
rs139596189 570 dbSNP
rs534744866 576 dbSNP
rs1287622830 585 dbSNP
rs1485237529 586 dbSNP
rs1006099867 591 dbSNP
rs1280886495 592 dbSNP
rs570468323 596 dbSNP
rs556220652 597 dbSNP
rs1308057522 598 dbSNP
rs908537335 598 dbSNP
rs1237036869 599 dbSNP
rs981562895 599 dbSNP
rs561880746 600 dbSNP
rs1328431159 609 dbSNP
rs1214039463 612 dbSNP
rs1254673400 615 dbSNP
rs754409035 617 dbSNP
rs1375748025 619 dbSNP
rs916111970 620 dbSNP
rs115136790 623 dbSNP
rs928263482 625 dbSNP
rs1414487087 626 dbSNP
rs1167464973 630 dbSNP
rs1376444517 630 dbSNP
rs1392728841 631 dbSNP
rs1315342737 636 dbSNP
rs61947515 639 dbSNP
rs1375849823 640 dbSNP
rs1342902760 647 dbSNP
rs1157787918 649 dbSNP
rs1349736158 650 dbSNP
rs1033224708 654 dbSNP
rs1332400074 658 dbSNP
rs1413656824 660 dbSNP
rs1220622043 671 dbSNP
rs1251482954 672 dbSNP
rs1185368626 675 dbSNP
rs1311298549 684 dbSNP
rs375863446 684 dbSNP
rs397718122 684 dbSNP
rs371711472 686 dbSNP
rs1243088279 694 dbSNP
rs966434638 695 dbSNP
rs1183515021 699 dbSNP
rs1484882260 701 dbSNP
rs368771677 705 dbSNP
rs375322635 705 dbSNP
rs755143149 721 dbSNP
rs1007955801 724 dbSNP
rs61947514 727 dbSNP
rs1216526365 733 dbSNP
rs1460672368 744 dbSNP
rs1307426971 747 dbSNP
rs1331335485 748 dbSNP
rs1028125286 759 dbSNP
rs1295033796 759 dbSNP
rs543069738 759 dbSNP
rs890861875 759 dbSNP
rs552782150 764 dbSNP
rs539573805 769 dbSNP
rs1308824433 774 dbSNP
rs898415310 775 dbSNP
rs1356486356 776 dbSNP
rs183612636 779 dbSNP
rs1380994492 780 dbSNP
rs939929944 781 dbSNP
rs886050092 783 dbSNP
rs887132261 783 dbSNP
rs1472771352 784 dbSNP
rs1422102877 785 dbSNP
rs1045751341 787 dbSNP
rs759869824 790 dbSNP
rs569938450 791 dbSNP
rs958406578 792 dbSNP
rs1376349187 796 dbSNP
rs1361825689 801 dbSNP
rs950128696 801 dbSNP
rs1357296286 805 dbSNP
rs866898233 810 dbSNP
rs1289995507 813 dbSNP
rs915975978 825 dbSNP
rs1289440540 829 dbSNP
rs1363797425 838 dbSNP
rs1390209072 841 dbSNP
rs1296376123 844 dbSNP
rs774524270 846 dbSNP
rs910728259 849 dbSNP
rs986759438 851 dbSNP
rs1217113140 852 dbSNP
rs1442289647 852 dbSNP
rs1418282114 854 dbSNP
rs1166597432 858 dbSNP
rs1244396017 859 dbSNP
rs1485077843 863 dbSNP
rs1426540589 866 dbSNP
rs955007734 869 dbSNP
rs1188379143 873 dbSNP
rs1395863324 874 dbSNP
rs1455753462 874 dbSNP
rs528186302 881 dbSNP
rs1260884408 886 dbSNP
rs17480581 890 dbSNP
rs1466305690 893 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugccgaucaccugguCCACUUCa 5'
                         ||||||| 
Target 5' --------------uGGUGAAGa 3'
1 - 9
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000381884.4 | 3UTR | UGGUGAAGAGAAAGCAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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