pre-miRNA Information
pre-miRNA hsa-mir-23a   
Genomic Coordinates chr19: 13836587 - 13836659
Synonyms MIRN23A, hsa-mir-23a, miRNA23A, MIR23A
Description Homo sapiens miR-23a stem-loop
Comment This miRNA was previously named miR-23 . This finding was later retracted after the discovery that the regulated gene was human homolog of ES1 (HES1), whose function is unknown.
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-23a-5p
Sequence 9| GGGGUUCCUGGGGAUGGGAUUU |30
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs748509260 12 dbSNP
rs1205403719 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CAMK2N2   
Synonyms CAM-KIIN, CAMKIIN
Description calcium/calmodulin dependent protein kinase II inhibitor 2
Transcript NM_033259   
Expression
Putative miRNA Targets on CAMK2N2
3'UTR of CAMK2N2
(miRNA target sites are highlighted)
>CAMK2N2|NM_033259|3'UTR
   1 ACGCGCCGGCTCGGGCGGCGGGCTCCGGGCCCAGCCTCGCAGCGGCCAGGAGCGCGGGCCGGCGATGCGGCTGCCGGCGC
  81 CCCCCCGCCCCGGCCCAGGCGCCCGCGGGCGGGGGCTGCAGGGCCGTGCCGCCGCCGCCGCCAGGCACTCCGGAGCTGTC
 161 CGCTTCAGCACCACGGCGGCCGCGGTAGCGGCGGCGCGGACCCGCCCGGAACCCGCCGCCGCGCTCATGCACTTTAAAAC
 241 CTCGGGCCGCAGCCCCACCCCGCACACCGGAACGGACACGGAGACCCGCGGCCCCCAGCCCCCGGCCCGCCCCCTCCCGC
 321 ACGGCTCCCCTGCCCCGCCCCCCTCCGGCCAGTCTGGTCTGCAGACCGGGCGGCCGCCGGTGTCGGACCGCGCGCGGCCA
 401 GGGATGTTTGGCTGCGTACTTGCATGAGCTTTCCACCCACTTGAGCCCAGTCCTCCGGGCCGTTCCTCGCCCCCACCCCT
 481 GTCTGGCGTGACCCCAGCCTCAGCCTCTTTCTAAGGGACTTCCTCAGCACATTTGTATTTTTATATCCGACTCTTTGTTT
 561 ACTGGCTCTGCTCATGGTTCCTGCCCTCCCCTCAGTCTCGGCCACGCTCTTCTGCGCCTGGCAGATAGGATGGGTGTTGA
 641 GGCTGGGATGAGACAAGCCCCCGACACGGTTACCAACCACATGGCCAGTCTGCCCAGGCCTGACCCCAGGAGGCTTTCTG
 721 GCAGACCCCTTCTCCCCAAGGTATCATCACCTTCCAAGGGCCCAGATCCGATTTTACCTTGGACCCCTGCGTCTTGCCCC
 801 TGGGAACCCAAATGGGGACTGCTCTGAACCTTTGGATGACATCTGTGGCCCCGGAGATGTTCTCAACCCAGGGGTGCCCT
 881 TCGTAAATGTTCCTCCATCCTCACTGTACCAGGAGTGTGTGAATAAACACAGACCCCCTCTG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuUAGGGUAGGGGUCCUUGGGg 5'
            :||::: |||::||||||| 
Target 5' gcGTCTTGCCCCTGGGAACCCa 3'
789 - 810 168.00 -27.50
2
miRNA  3' uuuaGGGUAGGGGUCCUUGGGg 5'
              |||:  ||| ||||||| 
Target 5' cggaCCCG--CCC-GGAACCCg 3'
197 - 215 153.00 -23.90
3
miRNA  3' uuuaGGGUAGGG---GU--CCUUGggg 5'
              |||| |||   ||  |||||   
Target 5' cagcCCCACCCCGCACACCGGAACgga 3'
250 - 276 120.00 -19.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN15165166 38 COSMIC
COSN26679999 220 COSMIC
COSN31485050 371 COSMIC
COSN22536136 440 COSMIC
COSN30165530 501 COSMIC
COSN30174158 501 COSMIC
COSN9765872 516 COSMIC
COSN23376325 615 COSMIC
COSN17075696 654 COSMIC
COSN31535796 769 COSMIC
COSN29941565 856 COSMIC
COSN9002784 923 COSMIC
COSN20274271 937 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs539240644 1 dbSNP
rs761314672 2 dbSNP
rs775795897 3 dbSNP
rs1416682969 4 dbSNP
rs772581489 5 dbSNP
rs746192755 6 dbSNP
rs1259302340 7 dbSNP
rs771323849 8 dbSNP
rs749457579 9 dbSNP
rs377017173 12 dbSNP
rs1002792509 13 dbSNP
rs1208609873 14 dbSNP
rs751527240 15 dbSNP
rs779918590 17 dbSNP
rs112778808 22 dbSNP
rs758222033 27 dbSNP
rs1232000246 28 dbSNP
rs1324477026 31 dbSNP
rs1178532497 33 dbSNP
rs1382557724 34 dbSNP
rs1440639097 35 dbSNP
rs1317456215 36 dbSNP
rs1286179280 37 dbSNP
rs1293623732 44 dbSNP
rs750259701 47 dbSNP
rs1217036491 48 dbSNP
rs1334897383 53 dbSNP
rs1327500693 56 dbSNP
rs903067817 61 dbSNP
rs1041973954 68 dbSNP
rs1377387763 71 dbSNP
rs1224661081 78 dbSNP
rs1233278235 80 dbSNP
rs1349933490 84 dbSNP
rs1011404266 85 dbSNP
rs1291874559 86 dbSNP
rs1039775628 87 dbSNP
rs893231888 87 dbSNP
rs1479303078 89 dbSNP
rs942767748 90 dbSNP
rs1051013181 91 dbSNP
rs1333687734 97 dbSNP
rs1401302432 99 dbSNP
rs1439954487 101 dbSNP
rs550431872 102 dbSNP
rs1332561844 107 dbSNP
rs1399941972 111 dbSNP
rs1233880968 114 dbSNP
rs1269463974 115 dbSNP
rs1409448232 116 dbSNP
rs529165898 124 dbSNP
rs1480715056 125 dbSNP
rs568376138 126 dbSNP
rs1188952739 130 dbSNP
rs974670553 136 dbSNP
rs1486536555 141 dbSNP
rs1242358961 143 dbSNP
rs1461149117 143 dbSNP
rs941525804 143 dbSNP
rs1162967898 144 dbSNP
rs1392632628 148 dbSNP
rs1387123327 151 dbSNP
rs1317633156 169 dbSNP
rs916706845 178 dbSNP
rs1463878007 181 dbSNP
rs991255946 184 dbSNP
rs1231080981 185 dbSNP
rs755834685 190 dbSNP
rs1242503244 193 dbSNP
rs1224448066 197 dbSNP
rs1323457776 198 dbSNP
rs1025577637 200 dbSNP
rs1186149801 204 dbSNP
rs1370411811 206 dbSNP
rs1458255647 210 dbSNP
rs981095575 214 dbSNP
rs972555425 216 dbSNP
rs549083861 218 dbSNP
rs1412373144 220 dbSNP
rs1011851082 221 dbSNP
rs1340672307 224 dbSNP
rs1269869739 226 dbSNP
rs1246053342 228 dbSNP
rs1260533568 236 dbSNP
rs1351874676 236 dbSNP
rs1219445129 244 dbSNP
rs892980871 245 dbSNP
rs1018487752 246 dbSNP
rs1198770498 249 dbSNP
rs1006939891 250 dbSNP
rs1424639499 251 dbSNP
rs891204808 256 dbSNP
rs1361857751 257 dbSNP
rs1441257041 290 dbSNP
rs1159245246 292 dbSNP
rs955773313 297 dbSNP
rs1338472058 299 dbSNP
rs1304061006 301 dbSNP
rs1029866895 304 dbSNP
rs1390462860 304 dbSNP
rs1405297645 308 dbSNP
rs994412522 309 dbSNP
rs897144672 315 dbSNP
rs1242760638 317 dbSNP
rs1419610717 319 dbSNP
rs1185634906 321 dbSNP
rs1347763262 329 dbSNP
rs1016909735 331 dbSNP
rs1231646646 331 dbSNP
rs1257867128 332 dbSNP
rs1483580718 334 dbSNP
rs1005564656 337 dbSNP
rs1195458849 337 dbSNP
rs929961132 338 dbSNP
rs1038629897 342 dbSNP
rs1377707443 343 dbSNP
rs1461030032 344 dbSNP
rs1296158099 346 dbSNP
rs1204746687 347 dbSNP
rs1449527562 347 dbSNP
rs1190708406 352 dbSNP
rs1332489189 361 dbSNP
rs1370667637 366 dbSNP
rs1312909394 368 dbSNP
rs941585117 368 dbSNP
rs554409285 371 dbSNP
rs1226784225 372 dbSNP
rs1256447331 376 dbSNP
rs1320250519 378 dbSNP
rs113537348 380 dbSNP
rs560370864 385 dbSNP
rs962613874 392 dbSNP
rs981126650 392 dbSNP
rs1425089154 393 dbSNP
rs1308222793 398 dbSNP
rs767719907 406 dbSNP
rs1163677789 416 dbSNP
rs1394223142 419 dbSNP
rs942318200 424 dbSNP
rs796658187 429 dbSNP
rs1272359376 434 dbSNP
rs1381774076 438 dbSNP
rs887998450 443 dbSNP
rs1342411706 445 dbSNP
rs150124211 447 dbSNP
rs1272764329 449 dbSNP
rs1385264233 452 dbSNP
rs957484229 453 dbSNP
rs931639448 456 dbSNP
rs1191364930 459 dbSNP
rs1453129830 461 dbSNP
rs1006676849 466 dbSNP
rs1301089016 469 dbSNP
rs891235834 472 dbSNP
rs1411176710 474 dbSNP
rs11713425 475 dbSNP
rs1029690173 476 dbSNP
rs1463452943 478 dbSNP
rs1350788374 480 dbSNP
rs1354983039 480 dbSNP
rs1419661251 481 dbSNP
rs1296821635 483 dbSNP
rs994183445 498 dbSNP
rs11546693 507 dbSNP
rs1167424612 510 dbSNP
rs11546694 519 dbSNP
rs923041495 522 dbSNP
rs142058438 525 dbSNP
rs1313198365 527 dbSNP
rs1316047230 543 dbSNP
rs1214379613 556 dbSNP
rs1288060051 569 dbSNP
rs1183799691 570 dbSNP
rs935066565 574 dbSNP
rs923807241 575 dbSNP
rs80286674 584 dbSNP
rs1055339515 592 dbSNP
rs1235433908 593 dbSNP
rs1473589142 595 dbSNP
rs939480307 599 dbSNP
rs968371734 600 dbSNP
rs1179521125 601 dbSNP
rs1045518913 602 dbSNP
rs544888522 604 dbSNP
rs1333617495 607 dbSNP
rs1203143904 613 dbSNP
rs912907199 615 dbSNP
rs1303585239 616 dbSNP
rs1372423802 620 dbSNP
rs991910317 621 dbSNP
rs1311425288 635 dbSNP
rs1361614158 640 dbSNP
rs958720023 642 dbSNP
rs1245518399 646 dbSNP
rs114012485 648 dbSNP
rs1310333158 650 dbSNP
rs1443579682 658 dbSNP
rs1002992139 661 dbSNP
rs911121218 663 dbSNP
rs1231947212 667 dbSNP
rs753231131 681 dbSNP
rs1392852753 698 dbSNP
rs1177132202 701 dbSNP
rs962120762 704 dbSNP
rs1374009929 705 dbSNP
rs556054941 708 dbSNP
rs374798405 713 dbSNP
rs1172435202 714 dbSNP
rs1423169886 722 dbSNP
rs1416229247 730 dbSNP
rs185601924 737 dbSNP
rs557527661 743 dbSNP
rs375987782 746 dbSNP
rs1444368080 748 dbSNP
rs9824 751 dbSNP
rs888041205 763 dbSNP
rs1029428339 767 dbSNP
rs1435685667 770 dbSNP
rs994265747 801 dbSNP
rs961725151 809 dbSNP
rs568969689 820 dbSNP
rs1315703036 821 dbSNP
rs1050674207 822 dbSNP
rs996811573 852 dbSNP
rs568675599 853 dbSNP
rs1420003739 867 dbSNP
rs1040006143 871 dbSNP
rs1458449470 883 dbSNP
rs895421373 884 dbSNP
rs1055370943 889 dbSNP
rs935122036 896 dbSNP
rs1479072079 899 dbSNP
rs1251752850 908 dbSNP
rs1180618054 913 dbSNP
rs369005418 917 dbSNP
rs147562769 930 dbSNP
rs1464294396 931 dbSNP
rs1173011634 935 dbSNP
rs1400784062 936 dbSNP
rs535293435 940 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uuuaggguaggggucCUUGGGg 5'
                         |:|||| 
Target 5' ---------cggcgcGGACCCg 3'
1 - 13
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000296238.3 | 3UTR | CGGCGCGGACCCGCCCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE15076 Monocyte-derived dendritic cells 0.915 2.7e-4 0.533 7.0e-2 9 Click to see details
GSE19783 ER- ER- breast cancer 0.264 9.4e-3 0.277 6.7e-3 79 Click to see details
GSE19536 Breast cancer 0.21 1.8e-2 0.202 2.2e-2 100 Click to see details
GSE28544 Breast cancer -0.403 2.5e-2 -0.412 2.3e-2 24 Click to see details
GSE32688 Pancreatic cancer 0.334 3.1e-2 0.180 1.6e-1 32 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.324 5.7e-2 -0.258 1.1e-1 25 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.267 9.8e-2 0.170 2.1e-1 25 Click to see details
GSE19783 ER+ ER+ breast cancer 0.268 1.3e-1 0.286 1.1e-1 20 Click to see details
GSE21032 Prostate cancer 0.102 1.8e-1 0.094 2.0e-1 83 Click to see details
GSE19350 CNS germ cell tumors -0.258 2.1e-1 -0.393 1.0e-1 12 Click to see details
GSE21687 Ependynoma primary tumors 0.092 2.3e-1 -0.143 1.3e-1 64 Click to see details
GSE28260 Renal cortex and medulla -0.213 2.4e-1 -0.313 1.5e-1 13 Click to see details
GSE38226 Liver fibrosis -0.123 3.0e-1 -0.448 2.1e-2 21 Click to see details
GSE26953 Aortic valvular endothelial cells -0.106 3.1e-1 -0.198 1.8e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.11 3.2e-1 -0.023 4.6e-1 20 Click to see details
GSE42095 Differentiated embryonic stem cells 0.028 4.5e-1 0.203 1.8e-1 23 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
ESCA -0.65 0.02 -0.509 0.05 11 Click to see details
KIRP -0.368 0.02 -0.412 0.01 32 Click to see details
UCEC -0.301 0.11 -0.391 0.05 19 Click to see details
CESC 0.935 0.12 1.000 0.5 3 Click to see details
PRAD -0.286 0.12 -0.105 0.33 19 Click to see details
PCPG 0.894 0.15 1.000 0.5 3 Click to see details
STAD -0.194 0.16 -0.169 0.19 28 Click to see details
KIRC 0.118 0.18 0.105 0.21 62 Click to see details
LUAD -0.316 0.2 -0.433 0.12 9 Click to see details
LUSC -0.133 0.21 -0.113 0.25 38 Click to see details
THCA -0.096 0.23 -0.087 0.26 59 Click to see details
BRCA 0.063 0.29 0.019 0.43 78 Click to see details
COAD 0.17 0.34 -0.190 0.33 8 Click to see details
PAAD 0.302 0.35 0.400 0.3 4 Click to see details
HNSC 0.05 0.38 0.021 0.45 40 Click to see details
CHOL 0.121 0.39 0.167 0.35 8 Click to see details
BLCA 0.069 0.4 0.082 0.38 16 Click to see details
KICH 0.059 0.4 0.156 0.26 20 Click to see details
LIHC 0.034 0.42 0.087 0.3 38 Click to see details
LIHC 0.034 0.42 0.087 0.3 38 Click to see details
LIHC 0.034 0.42 0.087 0.3 38 Click to see details
131 hsa-miR-23a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT038958 ATF1 activating transcription factor 1 1 1
MIRT057661 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT395438 NFKBID NFKB inhibitor delta 2 2
MIRT463884 WNT7B Wnt family member 7B 2 4
MIRT475804 HDGF heparin binding growth factor 2 2
MIRT478528 CTNS cystinosin, lysosomal cystine transporter 2 2
MIRT479278 CHD4 chromodomain helicase DNA binding protein 4 2 6
MIRT492564 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT500353 ZNF385A zinc finger protein 385A 2 2
MIRT509788 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT511566 HIST3H2BB histone cluster 3 H2B family member b 2 4
MIRT525450 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539558 CNKSR3 CNKSR family member 3 2 4
MIRT540034 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540225 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT540242 RGS17 regulator of G protein signaling 17 2 2
MIRT540871 ZBTB24 zinc finger and BTB domain containing 24 2 2
MIRT559065 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT560685 HIST1H1T histone cluster 1 H1 family member t 2 2
MIRT565593 SLC35G1 solute carrier family 35 member G1 2 2
MIRT565642 SKI SKI proto-oncogene 2 2
MIRT576747 Tmem127 transmembrane protein 127 2 2
MIRT607712 LIMS1 LIM zinc finger domain containing 1 2 2
MIRT615682 NAV2 neuron navigator 2 2 2
MIRT617337 ZSCAN2 zinc finger and SCAN domain containing 2 2 2
MIRT617378 FAM227A family with sequence similarity 227 member A 2 2
MIRT620855 SERPING1 serpin family G member 1 2 2
MIRT625112 SLC1A5 solute carrier family 1 member 5 2 2
MIRT625124 NUP93 nucleoporin 93 2 2
MIRT625898 LINC00632 long intergenic non-protein coding RNA 632 2 2
MIRT626016 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626481 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT626573 MED7 mediator complex subunit 7 2 2
MIRT626814 PRR11 proline rich 11 2 2
MIRT628136 HM13 histocompatibility minor 13 2 2
MIRT630771 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT633133 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT636950 APTX aprataxin 2 2
MIRT637802 GGPS1 geranylgeranyl diphosphate synthase 1 2 2
MIRT638622 GSR glutathione-disulfide reductase 2 4
MIRT642196 SMAGP small cell adhesion glycoprotein 2 2
MIRT645121 HES2 hes family bHLH transcription factor 2 2 2
MIRT645344 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT646564 ALDH5A1 aldehyde dehydrogenase 5 family member A1 2 2
MIRT649243 TRIM65 tripartite motif containing 65 2 2
MIRT651810 USP49 ubiquitin specific peptidase 49 2 2
MIRT652137 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT652668 TIMELESS timeless circadian clock 2 2
MIRT655894 NEK9 NIMA related kinase 9 2 2
MIRT656564 LYRM7 LYR motif containing 7 2 2
MIRT657194 IKZF3 IKAROS family zinc finger 3 2 2
MIRT657907 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT660207 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT660619 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2 2
MIRT660826 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT660986 ABHD2 abhydrolase domain containing 2 2 2
MIRT662232 PGBD4 piggyBac transposable element derived 4 2 2
MIRT663691 ZNF347 zinc finger protein 347 2 2
MIRT665577 TUBD1 tubulin delta 1 2 2
MIRT666149 SP2 Sp2 transcription factor 2 2
MIRT666310 SLC22A3 solute carrier family 22 member 3 2 2
MIRT666457 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT667716 KIAA1468 KIAA1468 2 2
MIRT668329 FKBP5 FK506 binding protein 5 2 2
MIRT668370 FBXO47 F-box protein 47 2 2
MIRT669304 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669538 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT671681 ADK adenosine kinase 2 2
MIRT672177 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT673604 HPSE heparanase 2 2
MIRT673749 ZNF333 zinc finger protein 333 2 2
MIRT674807 FAM229B family with sequence similarity 229 member B 2 2
MIRT675286 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT675391 SVOP SV2 related protein 2 2
MIRT675788 MED28 mediator complex subunit 28 2 2
MIRT676151 OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 2 2
MIRT676499 GJD3 gap junction protein delta 3 2 2
MIRT676621 CSNK1E casein kinase 1 epsilon 2 2
MIRT676644 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT676711 METTL14 methyltransferase like 14 2 2
MIRT676809 SHROOM4 shroom family member 4 2 2
MIRT677036 FOXO3 forkhead box O3 2 2
MIRT677062 NT5C2 5'-nucleotidase, cytosolic II 2 2
MIRT677086 SMIM15 small integral membrane protein 15 2 2
MIRT677193 MURC caveolae associated protein 4 2 2
MIRT677273 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT677345 POC1A POC1 centriolar protein A 2 2
MIRT677504 SLC10A6 solute carrier family 10 member 6 2 2
MIRT677526 OCIAD2 OCIA domain containing 2 2 2
MIRT677661 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT677727 SSR1 signal sequence receptor subunit 1 2 2
MIRT677803 PNPLA3 patatin like phospholipase domain containing 3 2 2
MIRT678144 SLC4A4 solute carrier family 4 member 4 2 2
MIRT678376 VTA1 vesicle trafficking 1 2 2
MIRT678708 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT678868 FAM118A family with sequence similarity 118 member A 2 2
MIRT679039 LACTB lactamase beta 2 2
MIRT679081 PURB purine rich element binding protein B 2 2
MIRT679137 SYK spleen associated tyrosine kinase 2 2
MIRT679299 SSBP2 single stranded DNA binding protein 2 2 2
MIRT679741 CABP4 calcium binding protein 4 2 2
MIRT679946 AS3MT arsenite methyltransferase 2 2
MIRT679976 E2F2 E2F transcription factor 2 2 2
MIRT683628 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT683901 PSMB9 proteasome subunit beta 9 2 2
MIRT684172 MOG myelin oligodendrocyte glycoprotein 2 2
MIRT684231 C20orf144 chromosome 20 open reading frame 144 2 2
MIRT685403 C1orf158 chromosome 1 open reading frame 158 2 2
MIRT686253 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT687513 NCKAP1 NCK associated protein 1 2 2
MIRT688243 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT688315 FAM151B family with sequence similarity 151 member B 2 2
MIRT688733 CNDP1 carnosine dipeptidase 1 2 2
MIRT689031 ANGPTL3 angiopoietin like 3 2 2
MIRT698207 TMEM248 transmembrane protein 248 2 2
MIRT699859 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT709954 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711541 MSH3 mutS homolog 3 2 2
MIRT712077 WDR37 WD repeat domain 37 2 2
MIRT715312 POLR2E RNA polymerase II subunit E 2 2
MIRT715725 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT715748 HSD11B1L hydroxysteroid 11-beta dehydrogenase 1 like 2 2
MIRT717604 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717875 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT718042 NIPAL2 NIPA like domain containing 2 2 2
MIRT718829 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT724037 CAMK2N2 calcium/calmodulin dependent protein kinase II inhibitor 2 2 2
MIRT733305 TNF tumor necrosis factor 1 0
MIRT734941 HSPA1B heat shock protein family A (Hsp70) member 1B 3 0
MIRT737343 IGF2 insulin like growth factor 2 3 0
MIRT737546 PTEN phosphatase and tensin homolog 2 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-23a 1'-Acetoxychavicol acetate (ACA) NULL 119104 Microarray HN4 cell line 24317043 2014 down-regulated
miR-23a 5-Fluorouracil approved 3385 Quantitative real-time PCR colon cancer cells 17702597 2007 up-regulated
miR-23a Curcumin NULL 969516 Microarray BxPC-3 human pancreatic carcinoma cell line 18347134 2008 up-regulated
miR-23a Enoxacin approved 3229 Quantitative real-time PCR HEK293 cells 18641635 2008 up-regulated
miR-23a 17beta-estradiol (E2) approved 5757 Quantitative real-time PCR endometrial stromal 19088369 2008 down-regulated
miR-23a 17beta-estradiol (E2) approved 5757 Quantitative real-time PCR glandular epithelial cells 19088369 2008 down-regulated
miR-23a Medroxyprogesterone acetate approved 6279 Quantitative real-time PCR endometrial stromal 19088369 2008 down-regulated
miR-23a Medroxyprogesterone acetate approved 6279 Quantitative real-time PCR glandular epithelial cells 19088369 2008 up-regulated
miR-23a 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
miR-23a Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 down-regulated
miR-23a Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-23a Bio-Oss NULL NULL Microarray osteoblast-like cell line (MG63) 20224834 2010 up-regulated
miR-23a Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
miR-23a 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 up-regulated
miR-23a Trastuzumab approved NULL Microarray BT474 cells 22384020 2012 up-regulated
miR-23a Trastuzumab approved NULL Microarray SKBR3 cells. 22384020 2012 up-regulated
miR-23a 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Quantitative real-time PCR thymus 23024791 2012 down-regulated
miR-23a Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-23a Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 up-regulated
miR-23a Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 up-regualted
miR-23a Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 down-regulated
miR-23a Comfrey NULL 6440495 Microarray rat liver 21370286 2011 up-regulated
miR-23a Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-23a Ethanol NULL 702 Quantitative real-time PCR zebrafish embryos 22298809 2012 down-regulated
miR-23a 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 up-regulated
miR-23a 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 up-regulated
miR-23a Morphine approved 5288826 Microarray human monocyte-derived macrophages (h-mdms) infection with HIV-1 20564181 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive Low Breast Cancer cell line (MDA-MB-231)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer cell line (BGC823)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer cell line (SGC-7901)
hsa-mir-23a Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-mir-23a Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-23a Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-mir-23a Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-23a Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive cell line (SGC-7901)
hsa-miR-23a-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-23a-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-23a-5p Palbociclib 5330286 NSC758247 approved resistant High Breast Cancer cell line (T47D)
hsa-miR-23a-5p Arsenic trioxide 261004 NSC759274 approved sensitive Low Acute Myeloid Leukemia cell line (U937, Kasumi-1, THP-1, Jurkat E6.1, SUP B15)
hsa-miR-23a-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-23a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-23a-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (total RNA)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-23a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-23a-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-23a-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-23a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-23a-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-23a-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-23a-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-23a-5p Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-23a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (MDA-231)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-23a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-23a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-23a-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

Error report submission