pre-miRNA Information
pre-miRNA hsa-mir-605   
Genomic Coordinates chr10: 51299573 - 51299655
Synonyms MIRN605, hsa-mir-605, MIR605
Description Homo sapiens miR-605 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-605-3p
Sequence 51| AGAAGGCACUAUGAGAUUUAGA |72
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 10 + 51299626 27587585, 28550310, 26028588, 26449202, 26487287, 29165639 MiREDiBase
A-to-I 14 10 + 51299636 29233923 MiREDiBase
A-to-I 20 10 + 51299642 18684997, 26449202, 27587585, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs759219082 5 dbSNP
rs1491224174 9 dbSNP
rs746611214 10 dbSNP
rs367648737 11 dbSNP
rs1359467239 14 dbSNP
rs1442565019 16 dbSNP
Putative Targets

Gene Information
Gene Symbol C1D   
Synonyms LRP1, Rrp47, SUN-CoR, SUNCOR, hC1D
Description C1D nuclear receptor corepressor
Transcript NM_001190263   
Other Transcripts NM_001190265 , NM_006333 , NM_173177   
Expression
Putative miRNA Targets on C1D
3'UTR of C1D
(miRNA target sites are highlighted)
>C1D|NM_001190263|3'UTR
   1 CTTTTTGGTTTTGATGTACACATATTCAAAAAGTACATCTTCCCCCCCCCCCCCCCCCCCGCAAAATAATTCTGTGGCAG
  81 GGCAAGGTTTAAATGTGTTTCTTATTAATATGTAAATTCACAGTAAATATGTAAAGCTAAATACTTTCCTCTCCAAAGAT
 161 CATTATCTTTATTGATTAGCACTGAGGATTTTAACATTGTGATATATTATATATTTATAATTTACCATCTCTTGATGAGA
 241 CTCTTATTTCTTTATATAGGTCAGTCTTGCAAGTACCATTTTATAAGCAGCTGTGAAATTTAAGTGAAATGTTCTTTGTA
 321 AACATTTGTACTATTTTAAATGAATAATGACCTTATGAAGTATGCTATCTGTAGGCTGAAATTATAGGTACATCTGTTTT
 401 CACTATATGATATTAAGAAAGCGTGAAATGACTTAAATGTTCATTTTTTTCTGTATAGATACTTTATCATGTTTTCATGA
 481 TTTTAGGAATTACTGCTTTGTTGATATTCAAAGTGTGAAACTAAAACTTTATGGTTGTACTTTAATTCTTGGCATGTTGC
 561 CTCTATGTCCCATTTAAAATAAAATACATTCTCATTAACTTTAGATGGGAAATAAGGTTGTATGTTGATGGATGAATTTT
 641 GGCATGATGACTGTACTCTCAATAAAGGCTGAAAATGTTGTATAACTGAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agAUUUA--GAGUAUCACGGAAGa 5'
            ||:||  :|:||  ||::||| 
Target 5' taTAGATACTTTATCATGTTTTCa 3'
454 - 477 130.00 -6.30
2
miRNA  3' agAUUUAGA---GUAUCACGGAaga 5'
            ||| |||   |||: |||||   
Target 5' ttTAATTCTTGGCATGTTGCCTcta 3'
541 - 565 128.00 -12.10
3
miRNA  3' agAUUUAGAGUAUC-------ACGGAAGa 5'
            |:||  |:||||       ||::||| 
Target 5' gcTGAA-ATTATAGGTACATCTGTTTTCa 3'
375 - 402 119.00 -8.91
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN14003485 14 COSMIC
COSN30114581 22 COSMIC
COSN32050418 42 COSMIC
COSN7081081 135 COSMIC
COSN31536865 314 COSMIC
COSN28757349 364 COSMIC
COSN15660408 423 COSMIC
COSN31531176 460 COSMIC
COSN31479931 503 COSMIC
COSN24801509 761 COSMIC
COSN25212684 761 COSMIC
COSN21471728 789 COSMIC
COSN7992318 1038 COSMIC
COSN8560979 1070 COSMIC
COSN1241741 1456 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs760479277 2 dbSNP
rs4352214 14 dbSNP
rs1051716676 18 dbSNP
rs1282050921 20 dbSNP
rs767148332 25 dbSNP
rs1345635785 27 dbSNP
rs761691658 29 dbSNP
rs1186186216 31 dbSNP
rs775908410 32 dbSNP
rs1341951814 33 dbSNP
rs760268841 33 dbSNP
rs1189035813 34 dbSNP
rs770113703 36 dbSNP
rs1274150757 37 dbSNP
rs1431910994 39 dbSNP
rs367798164 40 dbSNP
rs775245681 40 dbSNP
rs1173660456 41 dbSNP
rs1424248472 41 dbSNP
rs867976660 41 dbSNP
rs745636121 42 dbSNP
rs759724965 42 dbSNP
rs772033129 42 dbSNP
rs1407499499 43 dbSNP
rs774491546 43 dbSNP
rs776526473 45 dbSNP
rs770772832 46 dbSNP
rs771484706 46 dbSNP
rs1345451679 47 dbSNP
rs200579858 47 dbSNP
rs748489489 48 dbSNP
rs749186519 48 dbSNP
rs1263746922 49 dbSNP
rs1484730230 49 dbSNP
rs754583175 49 dbSNP
rs1426640812 50 dbSNP
rs753367606 50 dbSNP
rs1343078134 51 dbSNP
rs756079573 51 dbSNP
rs781148529 51 dbSNP
rs1403612196 52 dbSNP
rs868584232 52 dbSNP
rs11541329 53 dbSNP
rs1218465902 54 dbSNP
rs1323438965 54 dbSNP
rs1280870131 55 dbSNP
rs3038891 55 dbSNP
rs1326034229 56 dbSNP
rs1423207675 56 dbSNP
rs1441501827 57 dbSNP
rs1241124154 58 dbSNP
rs919843125 58 dbSNP
rs1340777817 59 dbSNP
rs1269177842 60 dbSNP
rs1165381747 61 dbSNP
rs1169018977 61 dbSNP
rs1203161372 61 dbSNP
rs1230654173 61 dbSNP
rs1242149206 61 dbSNP
rs1328576447 61 dbSNP
rs1356838553 61 dbSNP
rs1402535671 61 dbSNP
rs1409862408 61 dbSNP
rs1415106182 61 dbSNP
rs200836844 61 dbSNP
rs2902053 61 dbSNP
rs576219455 61 dbSNP
rs759938180 61 dbSNP
rs773742722 61 dbSNP
rs775749738 61 dbSNP
rs796544255 61 dbSNP
rs1213905981 63 dbSNP
rs1256152457 63 dbSNP
rs1428401468 63 dbSNP
rs1319303163 64 dbSNP
rs2902052 64 dbSNP
rs1198742231 65 dbSNP
rs1262065406 67 dbSNP
rs1360617796 67 dbSNP
rs1189233838 77 dbSNP
rs577854930 78 dbSNP
rs973730108 81 dbSNP
rs2861795 82 dbSNP
rs1296722681 91 dbSNP
rs1185285936 92 dbSNP
rs1426420837 93 dbSNP
rs1413885877 95 dbSNP
rs961065999 110 dbSNP
rs973523830 112 dbSNP
rs941793579 113 dbSNP
rs1403774329 118 dbSNP
rs1335169445 122 dbSNP
rs1429775422 128 dbSNP
rs907520310 128 dbSNP
rs983097461 131 dbSNP
rs959727499 133 dbSNP
rs1478813514 136 dbSNP
rs928198087 151 dbSNP
rs982423384 161 dbSNP
rs1261929413 165 dbSNP
rs190598590 174 dbSNP
rs3961803 178 dbSNP
rs1010964956 189 dbSNP
rs1188656153 198 dbSNP
rs996976182 199 dbSNP
rs1261776552 202 dbSNP
rs1265915247 206 dbSNP
rs1478453039 210 dbSNP
rs893388721 213 dbSNP
rs1427266851 216 dbSNP
rs1479085183 222 dbSNP
rs1200008902 224 dbSNP
rs569811886 225 dbSNP
rs3979577 234 dbSNP
rs1399847047 246 dbSNP
rs201923383 246 dbSNP
rs1296141824 248 dbSNP
rs1400507394 254 dbSNP
rs903209555 254 dbSNP
rs1282624242 256 dbSNP
rs1328844964 258 dbSNP
rs1392513782 261 dbSNP
rs1234791102 273 dbSNP
rs1031118330 286 dbSNP
rs555612310 287 dbSNP
rs950135557 288 dbSNP
rs1288563251 294 dbSNP
rs1380856405 295 dbSNP
rs1222384668 301 dbSNP
rs1265887227 302 dbSNP
rs890497181 314 dbSNP
rs1284606766 319 dbSNP
rs1453341705 324 dbSNP
rs1363394773 328 dbSNP
rs866072060 330 dbSNP
rs1160728361 332 dbSNP
rs996112433 333 dbSNP
rs1420152926 336 dbSNP
rs1302401388 338 dbSNP
rs1388511449 355 dbSNP
rs535499318 356 dbSNP
rs1334702081 360 dbSNP
rs1380521808 360 dbSNP
rs1237481148 361 dbSNP
rs1311076073 362 dbSNP
rs569780300 367 dbSNP
rs1354780873 370 dbSNP
rs1037554144 371 dbSNP
rs941761068 372 dbSNP
rs556177799 394 dbSNP
rs1054927210 404 dbSNP
rs937865768 407 dbSNP
rs1210997520 412 dbSNP
rs186273159 412 dbSNP
rs938346690 418 dbSNP
rs549902771 422 dbSNP
rs746775296 422 dbSNP
rs3979576 423 dbSNP
rs547814993 427 dbSNP
rs868430064 451 dbSNP
rs908177043 451 dbSNP
rs1182840296 456 dbSNP
rs181729450 457 dbSNP
rs1163822538 462 dbSNP
rs1459351897 462 dbSNP
rs1241849686 469 dbSNP
rs530222182 474 dbSNP
rs1458604887 481 dbSNP
rs1377211514 488 dbSNP
rs1028531990 490 dbSNP
rs548396871 491 dbSNP
rs989625988 510 dbSNP
rs1342682400 513 dbSNP
rs3979575 517 dbSNP
rs1246143627 522 dbSNP
rs1201785123 530 dbSNP
rs958223926 539 dbSNP
rs547161169 550 dbSNP
rs1316074385 554 dbSNP
rs1244987382 559 dbSNP
rs957565928 560 dbSNP
rs1356918414 563 dbSNP
rs189683931 565 dbSNP
rs1461066312 572 dbSNP
rs1180379549 597 dbSNP
rs1253792989 600 dbSNP
rs1033207775 604 dbSNP
rs1422843411 605 dbSNP
rs1463559275 611 dbSNP
rs1372502484 619 dbSNP
rs1400436344 622 dbSNP
rs1297725587 635 dbSNP
rs1465212888 640 dbSNP
rs1440066170 642 dbSNP
rs999039858 643 dbSNP
rs1396976398 656 dbSNP
rs999652027 660 dbSNP
rs186398318 662 dbSNP
rs1220504433 667 dbSNP
rs1014674858 671 dbSNP
rs1030341650 676 dbSNP
rs1208269611 680 dbSNP
rs866717648 682 dbSNP
rs1484074778 693 dbSNP
rs900435882 695 dbSNP
rs561516578 697 dbSNP
rs1038046762 704 dbSNP
rs1476780128 733 dbSNP
rs1195820872 742 dbSNP
rs529912803 783 dbSNP
rs1432159101 788 dbSNP
rs1006001568 789 dbSNP
rs778921583 789 dbSNP
rs1440888623 791 dbSNP
rs886312860 793 dbSNP
rs1298006668 794 dbSNP
rs1407841583 797 dbSNP
rs545772375 805 dbSNP
rs1174995289 806 dbSNP
rs1047430191 808 dbSNP
rs567501898 811 dbSNP
rs1299408144 815 dbSNP
rs938441443 819 dbSNP
rs1055922102 820 dbSNP
rs1303612165 821 dbSNP
rs564398154 826 dbSNP
rs1002024699 829 dbSNP
rs1285012314 829 dbSNP
rs540929937 831 dbSNP
rs1038226155 833 dbSNP
rs908460799 840 dbSNP
rs1050743397 841 dbSNP
rs1188976339 841 dbSNP
rs1433379108 847 dbSNP
rs928258677 849 dbSNP
rs1044083139 850 dbSNP
rs1240566992 858 dbSNP
rs1421982360 859 dbSNP
rs1316303725 864 dbSNP
rs948411048 873 dbSNP
rs916828604 874 dbSNP
rs975158792 875 dbSNP
rs1222153729 876 dbSNP
rs1368456536 877 dbSNP
rs1446307846 877 dbSNP
rs989766328 901 dbSNP
rs1307431730 902 dbSNP
rs1369739841 906 dbSNP
rs1303837740 909 dbSNP
rs1351148105 910 dbSNP
rs1242064779 912 dbSNP
rs572312040 918 dbSNP
rs149632837 927 dbSNP
rs1404631292 941 dbSNP
rs199752844 953 dbSNP
rs1219334469 954 dbSNP
rs1247925237 967 dbSNP
rs1488557226 972 dbSNP
rs957139326 974 dbSNP
rs936822400 993 dbSNP
rs1235986961 995 dbSNP
rs926095440 997 dbSNP
rs1159659167 999 dbSNP
rs1454583102 1000 dbSNP
rs1404069080 1005 dbSNP
rs1167592339 1009 dbSNP
rs371819027 1012 dbSNP
rs924109571 1015 dbSNP
rs1465171519 1018 dbSNP
rs542077124 1021 dbSNP
rs1329490227 1025 dbSNP
rs1363739863 1030 dbSNP
rs1157474660 1031 dbSNP
rs1379420070 1032 dbSNP
rs757444410 1033 dbSNP
rs1378235409 1035 dbSNP
rs978138279 1036 dbSNP
rs750654702 1044 dbSNP
rs781293439 1045 dbSNP
rs1479276503 1047 dbSNP
rs547793395 1049 dbSNP
rs967618209 1055 dbSNP
rs1178916284 1057 dbSNP
rs1237247434 1060 dbSNP
rs1472050802 1063 dbSNP
rs527945675 1064 dbSNP
rs1415173005 1071 dbSNP
rs757307563 1074 dbSNP
rs1485389113 1076 dbSNP
rs1014246892 1079 dbSNP
rs1402600966 1084 dbSNP
rs1258901159 1088 dbSNP
rs958986818 1089 dbSNP
rs1212242351 1090 dbSNP
rs1358360436 1098 dbSNP
rs1312690260 1102 dbSNP
rs1166089764 1109 dbSNP
rs1445555508 1112 dbSNP
rs1476316596 1118 dbSNP
rs965107162 1124 dbSNP
rs1034415132 1135 dbSNP
rs764349222 1141 dbSNP
rs1356039760 1144 dbSNP
rs1217976223 1146 dbSNP
rs1275729482 1158 dbSNP
rs994898823 1166 dbSNP
rs1277482454 1174 dbSNP
rs36112778 1176 dbSNP
rs576182933 1178 dbSNP
rs1212708152 1185 dbSNP
rs1238516862 1186 dbSNP
rs556339031 1196 dbSNP
rs1038173678 1198 dbSNP
rs140206514 1200 dbSNP
rs1478228100 1205 dbSNP
rs887026793 1205 dbSNP
rs886237614 1213 dbSNP
rs1280270825 1220 dbSNP
rs1412495877 1231 dbSNP
rs1335973230 1232 dbSNP
rs1375886167 1238 dbSNP
rs933655788 1243 dbSNP
rs920908543 1250 dbSNP
rs147341663 1253 dbSNP
rs1227536740 1258 dbSNP
rs1003010687 1268 dbSNP
rs1468072804 1270 dbSNP
rs1342476841 1271 dbSNP
rs878978114 1274 dbSNP
rs1220638066 1278 dbSNP
rs1281469121 1284 dbSNP
rs1488201614 1286 dbSNP
rs1215082458 1288 dbSNP
rs553731478 1297 dbSNP
rs370147993 1298 dbSNP
rs1198281118 1300 dbSNP
rs180754879 1304 dbSNP
rs568430265 1314 dbSNP
rs7559887 1315 dbSNP
rs1193371914 1316 dbSNP
rs1173433418 1332 dbSNP
rs948408816 1337 dbSNP
rs188253156 1350 dbSNP
rs75344900 1351 dbSNP
rs1362401410 1353 dbSNP
rs763040303 1355 dbSNP
rs993510081 1356 dbSNP
rs1483553609 1360 dbSNP
rs142698780 1367 dbSNP
rs1034320030 1371 dbSNP
rs924078393 1375 dbSNP
rs963415657 1376 dbSNP
rs978275526 1378 dbSNP
rs1015461425 1382 dbSNP
rs1203124195 1383 dbSNP
rs1238453134 1383 dbSNP
rs1321417784 1384 dbSNP
rs1260070429 1385 dbSNP
rs1228504293 1389 dbSNP
rs933509657 1390 dbSNP
rs1326050399 1391 dbSNP
rs1293926501 1405 dbSNP
rs923367879 1407 dbSNP
rs767064338 1412 dbSNP
rs975271628 1415 dbSNP
rs532650517 1417 dbSNP
rs551984562 1421 dbSNP
rs1016226600 1422 dbSNP
rs984643285 1423 dbSNP
rs1194426335 1424 dbSNP
rs868803634 1427 dbSNP
rs374133781 1428 dbSNP
rs1026210863 1433 dbSNP
rs560245333 1448 dbSNP
rs1002694313 1450 dbSNP
rs907067433 1451 dbSNP
rs1039306487 1453 dbSNP
rs935708351 1458 dbSNP
rs904274505 1462 dbSNP
rs1162651780 1469 dbSNP
rs1041885494 1471 dbSNP
rs764980850 1475 dbSNP
rs1013084246 1477 dbSNP
rs946217343 1483 dbSNP
rs759186849 1488 dbSNP
rs1045502183 1490 dbSNP
rs184634808 1494 dbSNP
rs937540135 1496 dbSNP
rs927530752 1498 dbSNP
rs936884835 1503 dbSNP
rs1444950040 1505 dbSNP
rs79493750 1511 dbSNP
rs1264205234 1541 dbSNP
rs1043061037 1542 dbSNP
rs759066979 1544 dbSNP
rs774176372 1545 dbSNP
rs933500570 1550 dbSNP
rs561988600 1559 dbSNP
rs1181745663 1563 dbSNP
rs923436264 1565 dbSNP
rs542040282 1568 dbSNP
rs1039082899 1572 dbSNP
rs1252812917 1573 dbSNP
rs1014993175 1583 dbSNP
rs943461523 1587 dbSNP
rs1186669684 1597 dbSNP
rs909191266 1598 dbSNP
rs984736654 1599 dbSNP
rs576344405 1601 dbSNP
rs1196420754 1602 dbSNP
rs1475876330 1605 dbSNP
rs1165056601 1620 dbSNP
rs770413553 1626 dbSNP
rs1339013942 1627 dbSNP
rs1333026776 1637 dbSNP
rs1397573011 1653 dbSNP
rs1395817236 1660 dbSNP
rs1311139919 1661 dbSNP
rs547885061 1667 dbSNP
rs1029876383 1668 dbSNP
rs997977297 1668 dbSNP
rs899758076 1670 dbSNP
rs1018182278 1671 dbSNP
rs545532871 1672 dbSNP
rs1360534293 1675 dbSNP
rs1486596293 1679 dbSNP
rs1188638600 1686 dbSNP
rs1314790509 1696 dbSNP
rs981807296 1715 dbSNP
rs576892595 1717 dbSNP
rs904220376 1724 dbSNP
rs1041400705 1725 dbSNP
rs945757388 1726 dbSNP
rs1465819319 1729 dbSNP
rs553455368 1735 dbSNP
rs1023230316 1736 dbSNP
rs895571946 1744 dbSNP
rs1057473268 1745 dbSNP
rs1328995154 1750 dbSNP
rs1220559737 1753 dbSNP
rs1338437484 1753 dbSNP
rs1296505372 1755 dbSNP
rs1311864069 1757 dbSNP
rs1231392112 1758 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000243077.3 | 3UTR | UUCAGGGAGACAGGCAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
100 hsa-miR-605-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061339 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT061584 BTG2 BTG anti-proliferation factor 2 2 6
MIRT076140 WDR81 WD repeat domain 81 2 2
MIRT079361 CCDC137 coiled-coil domain containing 137 2 2
MIRT079547 VAMP3 vesicle associated membrane protein 3 2 2
MIRT096242 CANX calnexin 2 2
MIRT243877 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT249186 AKIRIN1 akirin 1 2 8
MIRT273604 SP1 Sp1 transcription factor 2 2
MIRT316766 FOXC1 forkhead box C1 2 4
MIRT322410 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT370117 TRIB3 tribbles pseudokinase 3 2 2
MIRT392725 UBN2 ubinuclein 2 2 2
MIRT406910 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT407440 CTDSP1 CTD small phosphatase 1 2 2
MIRT441887 RD3 retinal degeneration 3 2 4
MIRT444979 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445241 FOXD4 forkhead box D4 2 2
MIRT445500 FOXD4L5 forkhead box D4 like 5 2 2
MIRT445503 FOXD4L4 forkhead box D4 like 4 2 2
MIRT447025 FOXD4L1 forkhead box D4 like 1 2 2
MIRT447743 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT448761 HDX highly divergent homeobox 2 2
MIRT450003 HAX1 HCLS1 associated protein X-1 2 2
MIRT452830 FAM131B family with sequence similarity 131 member B 2 2
MIRT452872 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT453506 ARRB1 arrestin beta 1 2 2
MIRT454169 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT458742 CES2 carboxylesterase 2 2 2
MIRT459166 HSPA6 heat shock protein family A (Hsp70) member 6 2 21
MIRT460246 IL17RB interleukin 17 receptor B 2 4
MIRT460514 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT460698 RNF157 ring finger protein 157 2 2
MIRT461481 METTL1 methyltransferase like 1 2 2
MIRT462617 C20orf27 chromosome 20 open reading frame 27 2 4
MIRT463233 ZNF131 zinc finger protein 131 2 2
MIRT465699 TNPO2 transportin 2 2 8
MIRT466304 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT468957 RPS14 ribosomal protein S14 2 6
MIRT469571 RARA retinoic acid receptor alpha 2 2
MIRT469685 RAB5B RAB5B, member RAS oncogene family 2 2
MIRT470800 PMP22 peripheral myelin protein 22 2 2
MIRT471649 PANK2 pantothenate kinase 2 2 4
MIRT471722 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472281 NFIB nuclear factor I B 2 4
MIRT473680 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT475859 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT477326 EPHA2 EPH receptor A2 2 2
MIRT477831 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 2 2
MIRT478572 CTNND1 catenin delta 1 2 4
MIRT479634 CD81 CD81 molecule 2 2
MIRT481950 ANKRD11 ankyrin repeat domain 11 2 2
MIRT483696 ZNF74 zinc finger protein 74 2 6
MIRT488798 MALT1 MALT1 paracaspase 2 2
MIRT489066 STARD3 StAR related lipid transfer domain containing 3 2 2
MIRT492533 PSMD11 proteasome 26S subunit, non-ATPase 11 2 2
MIRT492857 NRARP NOTCH regulated ankyrin repeat protein 2 2
MIRT496793 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT500122 ZNF106 zinc finger protein 106 2 4
MIRT505359 TMEM167A transmembrane protein 167A 2 2
MIRT506786 KLHL15 kelch like family member 15 2 6
MIRT510692 SRM spermidine synthase 2 6
MIRT515841 CEP104 centrosomal protein 104 2 4
MIRT516448 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT528855 PKP1 plakophilin 1 2 2
MIRT533848 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT539025 ATXN7L1 ataxin 7 like 1 2 4
MIRT542872 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT546543 SATB2 SATB homeobox 2 2 2
MIRT554114 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT560569 ZNF460 zinc finger protein 460 2 2
MIRT560796 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT562836 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT563109 IFRD2 interferon related developmental regulator 2 2 2
MIRT564177 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT564283 ASB1 ankyrin repeat and SOCS box containing 1 2 2
MIRT564350 USP22 ubiquitin specific peptidase 22 2 2
MIRT565279 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT565338 TMEM104 transmembrane protein 104 2 2
MIRT565905 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT567108 ITGB1 integrin subunit beta 1 2 2
MIRT567601 FANCF Fanconi anemia complementation group F 2 2
MIRT567779 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT568075 CENPQ centromere protein Q 2 2
MIRT624304 COL12A1 collagen type XII alpha 1 chain 2 2
MIRT644395 CDKL1 cyclin dependent kinase like 1 2 2
MIRT661547 ZNF674 zinc finger protein 674 2 4
MIRT670949 IRAK3 interleukin 1 receptor associated kinase 3 2 2
MIRT672951 AKAP5 A-kinase anchoring protein 5 2 2
MIRT697426 ZFP36 ZFP36 ring finger protein 2 2
MIRT700793 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT702657 ITGA3 integrin subunit alpha 3 2 2
MIRT708945 FZR1 fizzy and cell division cycle 20 related 1 2 2
MIRT713657 PLCE1 phospholipase C epsilon 1 2 2
MIRT719239 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719951 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT722048 HLA-E major histocompatibility complex, class I, E 2 2
MIRT722201 URM1 ubiquitin related modifier 1 2 2
MIRT724790 C1D C1D nuclear receptor corepressor 2 2
MIRT734347 CYP2B6 cytochrome P450 family 2 subfamily B member 6 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-605 Anthranilamide-pyrazolo[1,5-a]pyrimidine NULL NULL Quantitative real-time PCR neuroblastoma cells 23992861 2013 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-605 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-605 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-605-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)

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