pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-5p
Sequence 11| AAAAGUGAUUGCAGUGUUUG |30
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575563 29233923 MiREDiBase
A-to-I 4 4 + 76575564 29233923 MiREDiBase
A-to-I 13 4 + 76575573 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1249440036 5 dbSNP
rs1208814230 6 dbSNP
rs1327858995 9 dbSNP
rs1034733368 12 dbSNP
rs1334062111 15 dbSNP
rs1442043011 16 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PEA15   
Synonyms HMAT1, HUMMAT1H, MAT1, MAT1H, PEA-15, PED, PED-PEA15, PED/PEA15
Description phosphoprotein enriched in astrocytes 15
Transcript NM_003768   
Expression
Putative miRNA Targets on PEA15
3'UTR of PEA15
(miRNA target sites are highlighted)
>PEA15|NM_003768|3'UTR
   1 GCAAGGGGGAGGAAGAGGAGGAAGGTTGGACCTTCATCAGACCACTCCCTTCCCCCATCCTCCAGGAGAGGGGGCAAGGG
  81 CAACCCACCATCTACCCACTTACTAACCTGGTCCTAACCCCCTTACTGTGCGCGTGTGTGTGCGTGTGCGCACGCTCTGG
 161 CTGTTTGTCTATATGTCTAGCTCATCTAGTTCCTCTTCTTAAGGGGATGGGGGTCAGGGGCTAGGGGAGGGGGCTGAGTT
 241 TCCCCACTTTAGGAGGAGGTGGGGGCTATTTCTATGCAAATAGAAATCAGCACATTCCTCCTACTTCCCTTTCCTCCACT
 321 CCCCCCATATCTTTAAAGTGTGGAAGCAGAAAGGACCTGCATTTTCCTACATTGAGGAGCTGACATAGGGGTAAGGTATG
 401 GGAGAGGTAGGTGGATCCAGGGAAAAGCAGTGGGGACGGAAGGCAAAGAGACCACTCAACCCCCACCTGGAAGGGGCAAA
 481 GAAAAGCCAGAGTTCCATGTTTGTACTCCTGTGCTGGACTGTTTCCTGAGTACCAGCAGGTCCCTTTTTGTCTCTCATGG
 561 GCCTAGCATAGGTATGAGCCAGGGATCCTTTCCTGGTCCCTAAGATCAAACCCCATGGAGCAGCCAGCGTTAGATGCCCC
 641 CACCCACCTGTACTCTGGAGAGACTGTGCTGGGAACATGTACCACTGAGCCTGAGATGGGGATGAGGGCAGAGAGAGGGG
 721 AGCCCCCTCTTCCACTCAGTTGTTCCTACTCAGACTGTTGCACTCTAAACCTAGGGAGGTTGAAGAATGAGACCCTTAGG
 801 TTTTAACACGAATCCTGACACCACCATCTATAGGGTCCCAACTTGGTTATTGTAGGCAACCTTCCCTCTCTCCTTGGTGA
 881 AGAACATCCCAAGCCAGAAAGAAGTTAACTACAGTGTTTTCCTTTGCACCGATCCCCACCCCAATTCAATCCCGGAAGGG
 961 ACTTACTTAGGAAACCCTTCTTTACTAGATATCCTGGCCCCCTGGGCTTGTGAACACCTCCTAGCCACATCACTACAGTA
1041 CAGTGAGTGACCCCAGCCTCCTGCCTACCCCAAGATGCCCCTCCCCACCCTGACCGTGCTAACTGTGTGTACATATATAT
1121 TCTACATATATGTATATTAAAACTGCACTGCCATGTCTGCCCTTTTTTGTGGTGTCTAGCATTAACTTATTGTCTAGGCC
1201 AGAGCGGGGGTGGGAGGGGAATGCCACAGTGAAGGGAGTGGCAGAATCAAATTGCTACATAGTCCAAACAAAAAAGAAGG
1281 CTTTTTCAAAAAACATTAAATTCACATGCAGTCTCAGAGACTATTTAGACAAAGTTCAAGTTAGGAGCTTTTAGGATGTG
1361 GGAGTAAAACTTTAATGGGAGGGGAGGGCTGGCTGCTGGAAGAAGGAAGAAGCCAGACTGGTTAGACAGTACTCTTAACT
1441 CCTAGCCCAGCCTAGCGTGCCCTGCCCCTCTGGCCACTGCTGCAGACACCTGCCTTAACACACACACCTCTAGGACTCCA
1521 CAGTTTTGCCTTAAAGGACCTTCCCAAGTCTCCCTTTCCCTGTCTGGCTTCTCCCTTAAGAAGAGAGAGATACTTGTAGA
1601 ATTGGGTGGGGGGAATGAGCATGAACTGTCCTTCCATTTGGGATATGTTACATTAGAGTGAGAGAGAGAATAAGGAGCCT
1681 TTCTTATGGAAGAAATGGGAGAAGAGAGACAGGGTTCTTTTCAGCAGAGTCTAGTAGTTTCTCTGTAAGGCAAAATAATC
1761 TAAAAAGACTAACCTGCCCACCCACTCCTTATATTGCTGTGAGATTGCCCCTATCTTGTGCTCTTCTGTCTGCAGTGTGC
1841 ACGGCCTTGTTCTAACCCGGAATAAAGGTGATTGATTGTATTGCAACTAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' guUUGU-GACGU-UAGUGAAAa 5'
            |::| | ||| :|| |||| 
Target 5' tgAGTACCAGCAGGTCCCTTTt 3'
527 - 548 122.00 -7.40
2
miRNA  3' guuugugacguuaGUGAAAa 5'
                       |||||| 
Target 5' ggctgagtttcccCACTTTa 3'
232 - 251 120.00 -5.30
3
miRNA  3' guUUGU----GA-C-GU-UAGUGAaaa 5'
            ||||    || | || ||||||   
Target 5' tgAACACCTCCTAGCCACATCACTaca 3'
1011 - 1037 112.00 -6.12
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30477468 16 COSMIC
COSN15657133 21 COSMIC
COSN4892369 27 COSMIC
COSN31504841 50 COSMIC
COSN20073528 55 COSMIC
COSN30164516 93 COSMIC
COSN24947561 132 COSMIC
COSN31606001 135 COSMIC
COSN31520528 284 COSMIC
COSN31491306 327 COSMIC
COSN15082475 357 COSMIC
COSN26632826 522 COSMIC
COSN26548509 551 COSMIC
COSN8636532 766 COSMIC
COSN31526754 917 COSMIC
COSN31524090 1033 COSMIC
COSN31596721 1057 COSMIC
COSN8645622 1277 COSMIC
COSN31544086 1331 COSMIC
COSN31550890 1344 COSMIC
COSN26669396 1385 COSMIC
COSN22199318 1390 COSMIC
COSN30172849 1464 COSMIC
COSN30177010 1590 COSMIC
COSN31522171 1681 COSMIC
COSN16346248 1804 COSMIC
COSN7180514 1843 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1314251123 7 dbSNP
rs112058684 10 dbSNP
rs11552717 12 dbSNP
rs569561993 13 dbSNP
rs1276446970 16 dbSNP
rs748009727 19 dbSNP
rs1464078974 20 dbSNP
rs1268419253 21 dbSNP
rs371465689 27 dbSNP
rs373598990 29 dbSNP
rs769825245 32 dbSNP
rs1242858153 34 dbSNP
rs548605601 38 dbSNP
rs772589067 40 dbSNP
rs368061272 42 dbSNP
rs1184069914 44 dbSNP
rs1390954270 53 dbSNP
rs772908449 54 dbSNP
rs979267092 55 dbSNP
rs999141188 56 dbSNP
rs1159953712 57 dbSNP
rs1400680663 58 dbSNP
rs11552712 63 dbSNP
rs551941744 67 dbSNP
rs1332498743 71 dbSNP
rs1174741440 75 dbSNP
rs1234876722 85 dbSNP
rs1273792509 86 dbSNP
rs1246425512 91 dbSNP
rs1191381161 98 dbSNP
rs1465941217 101 dbSNP
rs11552714 103 dbSNP
rs1248148306 104 dbSNP
rs924022448 110 dbSNP
rs935434746 118 dbSNP
rs986919155 120 dbSNP
rs1315115321 126 dbSNP
rs1049198 132 dbSNP
rs1219667295 132 dbSNP
rs11552718 133 dbSNP
rs1040327151 134 dbSNP
rs549116407 134 dbSNP
rs898784054 135 dbSNP
rs1187186265 137 dbSNP
rs1415914897 139 dbSNP
rs916332138 139 dbSNP
rs1321362836 140 dbSNP
rs761666619 142 dbSNP
rs1047285046 144 dbSNP
rs767419918 145 dbSNP
rs1452183637 146 dbSNP
rs1286628174 150 dbSNP
rs866656268 151 dbSNP
rs1386576818 154 dbSNP
rs980704083 155 dbSNP
rs1005010158 157 dbSNP
rs1311938940 162 dbSNP
rs1034794106 164 dbSNP
rs928862539 164 dbSNP
rs938953616 166 dbSNP
rs1187458220 170 dbSNP
rs896099738 172 dbSNP
rs1238643697 174 dbSNP
rs1011920934 175 dbSNP
rs567614359 182 dbSNP
rs1277974352 185 dbSNP
rs1230312120 190 dbSNP
rs1298605342 198 dbSNP
rs1214140921 203 dbSNP
rs1234936468 208 dbSNP
rs1285986279 209 dbSNP
rs1293606622 209 dbSNP
rs1316281548 210 dbSNP
rs1449449833 213 dbSNP
rs1375346858 217 dbSNP
rs1037289131 219 dbSNP
rs1311502264 220 dbSNP
rs41265777 221 dbSNP
rs1236861034 222 dbSNP
rs1371486934 223 dbSNP
rs1169323994 224 dbSNP
rs1262415322 234 dbSNP
rs1426316310 235 dbSNP
rs1351543385 236 dbSNP
rs1415371597 236 dbSNP
rs1210223852 243 dbSNP
rs918557404 260 dbSNP
rs1255306230 263 dbSNP
rs1255697481 265 dbSNP
rs967975759 276 dbSNP
rs1273584653 277 dbSNP
rs1204125603 286 dbSNP
rs1305950530 296 dbSNP
rs979214562 300 dbSNP
rs931319329 303 dbSNP
rs750218432 305 dbSNP
rs956587114 314 dbSNP
rs1412157220 317 dbSNP
rs1297923238 321 dbSNP
rs987253044 321 dbSNP
rs1460188243 323 dbSNP
rs1251475147 324 dbSNP
rs188325001 326 dbSNP
rs1164935429 327 dbSNP
rs546848578 328 dbSNP
rs964385110 329 dbSNP
rs975451286 330 dbSNP
rs1472851906 332 dbSNP
rs920157931 334 dbSNP
rs1425311397 336 dbSNP
rs931581928 337 dbSNP
rs1047357563 339 dbSNP
rs1040892075 342 dbSNP
rs1453915891 350 dbSNP
rs1222499139 370 dbSNP
rs1172426851 372 dbSNP
rs1373239842 373 dbSNP
rs1416178045 387 dbSNP
rs571386084 389 dbSNP
rs192770877 390 dbSNP
rs1330390067 392 dbSNP
rs901097232 403 dbSNP
rs999361355 407 dbSNP
rs866075364 409 dbSNP
rs1056581539 411 dbSNP
rs896269800 412 dbSNP
rs1030887260 417 dbSNP
rs17847309 438 dbSNP
rs1160694116 439 dbSNP
rs1457746755 447 dbSNP
rs1363142143 448 dbSNP
rs1156745523 449 dbSNP
rs1011010034 453 dbSNP
rs1049201 458 dbSNP
rs41265779 465 dbSNP
rs956713937 467 dbSNP
rs1210647183 471 dbSNP
rs969576917 475 dbSNP
rs1233699425 482 dbSNP
rs1278204176 488 dbSNP
rs753287587 493 dbSNP
rs1350342442 497 dbSNP
rs980262845 503 dbSNP
rs928747982 507 dbSNP
rs41265781 512 dbSNP
rs1233158413 515 dbSNP
rs1250969123 518 dbSNP
rs1479887769 531 dbSNP
rs964185918 532 dbSNP
rs754592306 536 dbSNP
rs918853224 539 dbSNP
rs1467476918 540 dbSNP
rs931312315 553 dbSNP
rs1435548176 557 dbSNP
rs1172749582 558 dbSNP
rs529111753 568 dbSNP
rs975398744 570 dbSNP
rs1190676853 572 dbSNP
rs911303546 575 dbSNP
rs1261062807 577 dbSNP
rs942820518 579 dbSNP
rs1203923767 581 dbSNP
rs1041115179 585 dbSNP
rs900981373 588 dbSNP
rs1192478882 595 dbSNP
rs935180735 596 dbSNP
rs1392780389 597 dbSNP
rs919896949 599 dbSNP
rs1210594873 603 dbSNP
rs952707857 614 dbSNP
rs982991883 618 dbSNP
rs1436034233 623 dbSNP
rs908800160 629 dbSNP
rs554285561 630 dbSNP
rs1173921720 632 dbSNP
rs1353536090 638 dbSNP
rs1227624340 640 dbSNP
rs894648000 646 dbSNP
rs1325368871 648 dbSNP
rs1460295527 650 dbSNP
rs938839118 651 dbSNP
rs1299630110 654 dbSNP
rs17847310 660 dbSNP
rs1312114223 663 dbSNP
rs541389150 664 dbSNP
rs1803942 665 dbSNP
rs1170733550 671 dbSNP
rs41265783 678 dbSNP
rs1191078393 684 dbSNP
rs1235078685 687 dbSNP
rs1426132047 688 dbSNP
rs1258818019 690 dbSNP
rs1187769938 693 dbSNP
rs1295192672 702 dbSNP
rs757734100 705 dbSNP
rs1277150992 707 dbSNP
rs1305938712 710 dbSNP
rs1207108428 712 dbSNP
rs904859030 719 dbSNP
rs1246336929 727 dbSNP
rs1356087648 728 dbSNP
rs903493136 729 dbSNP
rs1412797573 730 dbSNP
rs1003260191 733 dbSNP
rs1034781073 734 dbSNP
rs1410785854 736 dbSNP
rs1396020183 737 dbSNP
rs1468305852 739 dbSNP
rs1000497076 740 dbSNP
rs1459511225 743 dbSNP
rs960172132 744 dbSNP
rs1418589762 746 dbSNP
rs1164278068 750 dbSNP
rs1052775140 752 dbSNP
rs752616292 756 dbSNP
rs11552711 767 dbSNP
rs17847311 780 dbSNP
rs1254198088 783 dbSNP
rs972921334 787 dbSNP
rs1255405868 792 dbSNP
rs12040700 800 dbSNP
rs1436955651 808 dbSNP
rs1248154436 809 dbSNP
rs892424001 810 dbSNP
rs1008460370 811 dbSNP
rs781686101 814 dbSNP
rs11552713 820 dbSNP
rs17847312 821 dbSNP
rs746275942 843 dbSNP
rs1279716341 844 dbSNP
rs199676496 845 dbSNP
rs953112653 851 dbSNP
rs1327256360 857 dbSNP
rs1443634993 859 dbSNP
rs1172289002 861 dbSNP
rs1395820473 876 dbSNP
rs984137499 880 dbSNP
rs1027073231 888 dbSNP
rs952656006 902 dbSNP
rs982813710 909 dbSNP
rs1159296259 911 dbSNP
rs1469813277 916 dbSNP
rs1016256868 921 dbSNP
rs911175657 928 dbSNP
rs942713653 930 dbSNP
rs865926151 931 dbSNP
rs922711221 932 dbSNP
rs867730463 935 dbSNP
rs17847313 937 dbSNP
rs1052252327 940 dbSNP
rs1222769687 941 dbSNP
rs563826860 954 dbSNP
rs879060024 955 dbSNP
rs1236902974 960 dbSNP
rs200582842 961 dbSNP
rs373169910 961 dbSNP
rs531040513 961 dbSNP
rs549427536 962 dbSNP
rs893719739 966 dbSNP
rs1325752592 969 dbSNP
rs200022400 977 dbSNP
rs796987755 977 dbSNP
rs946585801 977 dbSNP
rs1319049089 988 dbSNP
rs1400242422 994 dbSNP
rs561151171 998 dbSNP
rs1044995199 1003 dbSNP
rs1175789001 1008 dbSNP
rs1441768950 1011 dbSNP
rs1394261057 1014 dbSNP
rs904827115 1020 dbSNP
rs1451243055 1027 dbSNP
rs936339474 1030 dbSNP
rs1214425935 1031 dbSNP
rs528468529 1032 dbSNP
rs1444812604 1036 dbSNP
rs538490663 1037 dbSNP
rs1211174156 1043 dbSNP
rs1348966071 1048 dbSNP
rs892364509 1052 dbSNP
rs943941119 1055 dbSNP
rs1296552536 1067 dbSNP
rs1232629768 1077 dbSNP
rs1034749934 1078 dbSNP
rs1364670085 1084 dbSNP
rs897607151 1085 dbSNP
rs1430054542 1086 dbSNP
rs1041378517 1098 dbSNP
rs777485199 1099 dbSNP
rs552660024 1110 dbSNP
rs1375133582 1113 dbSNP
rs1171503740 1114 dbSNP
rs996689306 1118 dbSNP
rs546618294 1125 dbSNP
rs1185883145 1127 dbSNP
rs1275620662 1128 dbSNP
rs1474108344 1134 dbSNP
rs1238707378 1135 dbSNP
rs1026272752 1137 dbSNP
rs1188129451 1139 dbSNP
rs780325574 1146 dbSNP
rs984747361 1156 dbSNP
rs1485132427 1169 dbSNP
rs1469272016 1191 dbSNP
rs1018543782 1193 dbSNP
rs35869719 1198 dbSNP
rs1027063237 1203 dbSNP
rs888569986 1206 dbSNP
rs749501763 1207 dbSNP
rs1004196458 1211 dbSNP
rs1015621636 1225 dbSNP
rs1187968969 1259 dbSNP
rs976747365 1261 dbSNP
rs922678845 1266 dbSNP
rs1474787794 1274 dbSNP
rs1162471604 1275 dbSNP
rs571204504 1281 dbSNP
rs960324661 1282 dbSNP
rs1419982262 1288 dbSNP
rs956824468 1288 dbSNP
rs988244453 1292 dbSNP
rs1317536107 1294 dbSNP
rs1343575614 1296 dbSNP
rs1432935704 1297 dbSNP
rs1178596206 1299 dbSNP
rs915024514 1300 dbSNP
rs1289717164 1301 dbSNP
rs946583484 1307 dbSNP
rs1204341415 1310 dbSNP
rs768867620 1317 dbSNP
rs774301959 1323 dbSNP
rs993057792 1326 dbSNP
rs1023649353 1327 dbSNP
rs1291606930 1337 dbSNP
rs970193944 1341 dbSNP
rs978941429 1345 dbSNP
rs925016789 1358 dbSNP
rs938986429 1362 dbSNP
rs184078808 1367 dbSNP
rs1396555238 1378 dbSNP
rs1326530948 1380 dbSNP
rs1460420000 1398 dbSNP
rs1336138656 1402 dbSNP
rs988308657 1405 dbSNP
rs1419294636 1411 dbSNP
rs1406860268 1415 dbSNP
rs897577377 1417 dbSNP
rs913545585 1420 dbSNP
rs993208339 1434 dbSNP
rs1282731901 1439 dbSNP
rs746079707 1443 dbSNP
rs1255392434 1453 dbSNP
rs1214879149 1457 dbSNP
rs575186308 1458 dbSNP
rs1271346399 1463 dbSNP
rs756334466 1468 dbSNP
rs1241348375 1469 dbSNP
rs1317721168 1473 dbSNP
rs1306608162 1485 dbSNP
rs1263468368 1488 dbSNP
rs1221818168 1490 dbSNP
rs1372935517 1501 dbSNP
rs899783291 1509 dbSNP
rs550370260 1519 dbSNP
rs753501863 1519 dbSNP
rs1392278739 1522 dbSNP
rs932470007 1535 dbSNP
rs1005740270 1536 dbSNP
rs1185565461 1552 dbSNP
rs1018926635 1561 dbSNP
rs13904 1564 dbSNP
rs964294119 1576 dbSNP
rs1344201739 1580 dbSNP
rs151110634 1582 dbSNP
rs371206337 1582 dbSNP
rs1259417814 1584 dbSNP
rs1397279818 1586 dbSNP
rs998137177 1587 dbSNP
rs888517806 1591 dbSNP
rs1454210164 1595 dbSNP
rs143973747 1603 dbSNP
rs1206940317 1608 dbSNP
rs760587164 1609 dbSNP
rs956712089 1610 dbSNP
rs988602077 1611 dbSNP
rs535986418 1613 dbSNP
rs189247699 1615 dbSNP
rs1402541039 1616 dbSNP
rs980659211 1618 dbSNP
rs1368663943 1628 dbSNP
rs148610120 1633 dbSNP
rs1375103050 1637 dbSNP
rs1014707704 1649 dbSNP
rs1382252502 1652 dbSNP
rs753628791 1657 dbSNP
rs926520266 1658 dbSNP
rs1286691224 1660 dbSNP
rs1314979534 1660 dbSNP
rs751646911 1661 dbSNP
rs868385352 1661 dbSNP
rs1434531255 1662 dbSNP
rs1195980529 1679 dbSNP
rs1376386701 1679 dbSNP
rs11552715 1680 dbSNP
rs1261132010 1692 dbSNP
rs1441925479 1702 dbSNP
rs1486767102 1702 dbSNP
rs970309876 1702 dbSNP
rs1056398573 1703 dbSNP
rs1342643632 1704 dbSNP
rs1252944865 1705 dbSNP
rs1228073050 1707 dbSNP
rs1306916315 1709 dbSNP
rs1275742992 1712 dbSNP
rs879484178 1714 dbSNP
rs929002656 1723 dbSNP
rs1311925865 1726 dbSNP
rs1033112626 1727 dbSNP
rs1330158377 1728 dbSNP
rs759264455 1730 dbSNP
rs887561170 1731 dbSNP
rs550180095 1735 dbSNP
rs1373064221 1743 dbSNP
rs965064704 1745 dbSNP
rs976862513 1750 dbSNP
rs921162468 1765 dbSNP
rs932583120 1780 dbSNP
rs1187518550 1789 dbSNP
rs1048353232 1795 dbSNP
rs1282022050 1798 dbSNP
rs752168406 1809 dbSNP
rs138812017 1812 dbSNP
rs1037113633 1813 dbSNP
rs1256126788 1814 dbSNP
rs1180756363 1819 dbSNP
rs3189630 1824 dbSNP
rs142061277 1825 dbSNP
rs781585009 1843 dbSNP
rs1179363802 1848 dbSNP
rs1337228428 1850 dbSNP
rs1331271115 1855 dbSNP
rs1392381138 1859 dbSNP
rs578251439 1860 dbSNP
rs1329940531 1873 dbSNP
rs1014240119 1877 dbSNP
rs1432909067 1879 dbSNP
rs1418676130 1880 dbSNP
rs1164389086 1883 dbSNP
rs1182221904 1885 dbSNP
rs1471925642 1885 dbSNP
rs998357607 1885 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000360472.4 | 3UTR | UUAGGAGGAGGUGGGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
302 hsa-miR-548ah-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057035 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT060559 CCND1 cyclin D1 2 12
MIRT061211 MED17 mediator complex subunit 17 2 2
MIRT061700 BTG2 BTG anti-proliferation factor 2 2 4
MIRT064457 GPR137B G protein-coupled receptor 137B 2 2
MIRT065680 ACVR1B activin A receptor type 1B 2 6
MIRT068902 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT069414 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT069711 FOXJ3 forkhead box J3 2 2
MIRT071220 FCF1 FCF1, rRNA-processing protein 2 2
MIRT072258 B2M beta-2-microglobulin 2 10
MIRT073631 IGF1R insulin like growth factor 1 receptor 2 4
MIRT077074 KRT10 keratin 10 2 8
MIRT080711 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT081230 MIDN midnolin 2 8
MIRT085792 FMNL2 formin like 2 2 2
MIRT088055 UBXN2A UBX domain protein 2A 2 4
MIRT089219 ACTR2 ARP2 actin related protein 2 homolog 2 6
MIRT090626 PLS1 plastin 1 2 2
MIRT091390 EIF4A2 eukaryotic translation initiation factor 4A2 2 2
MIRT092424 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 2
MIRT094197 THAP6 THAP domain containing 6 2 2
MIRT098283 SMIM13 small integral membrane protein 13 2 6
MIRT099150 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT103209 SP4 Sp4 transcription factor 2 6
MIRT108713 XIAP X-linked inhibitor of apoptosis 2 2
MIRT114051 AKAP11 A-kinase anchoring protein 11 2 12
MIRT135494 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT156020 SIK1 salt inducible kinase 1 2 2
MIRT173035 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT182263 POU2F1 POU class 2 homeobox 1 2 2
MIRT182529 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT184889 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT187295 CLIC4 chloride intracellular channel 4 2 4
MIRT187488 PCBP2 poly(rC) binding protein 2 2 4
MIRT188194 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT188215 RAP1B RAP1B, member of RAS oncogene family 2 2
MIRT192288 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT201087 ZNF805 zinc finger protein 805 2 2
MIRT212617 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 8
MIRT213196 REST RE1 silencing transcription factor 2 2
MIRT213334 KIAA0232 KIAA0232 2 2
MIRT213444 DCK deoxycytidine kinase 2 4
MIRT220129 CAV1 caveolin 1 2 2
MIRT230191 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT242730 ZNF714 zinc finger protein 714 2 2
MIRT242759 FNBP1L formin binding protein 1 like 2 2
MIRT257297 FOXC1 forkhead box C1 2 2
MIRT258911 LAPTM4B lysosomal protein transmembrane 4 beta 2 4
MIRT260958 SCD stearoyl-CoA desaturase 2 2
MIRT263458 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT284918 NFAT5 nuclear factor of activated T-cells 5 2 6
MIRT291947 TPM4 tropomyosin 4 2 2
MIRT297340 BCL2L11 BCL2 like 11 2 8
MIRT308819 NPNT nephronectin 2 2
MIRT311518 ISOC1 isochorismatase domain containing 1 2 2
MIRT314181 OCLN occludin 2 4
MIRT315706 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 2
MIRT331762 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT338783 STMN1 stathmin 1 2 2
MIRT341459 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT344226 SRSF11 serine and arginine rich splicing factor 11 2 2
MIRT355851 SGMS2 sphingomyelin synthase 2 2 4
MIRT409854 RLIM ring finger protein, LIM domain interacting 2 2
MIRT442758 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT443716 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT444315 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT444387 ZNF623 zinc finger protein 623 2 2
MIRT445543 TBC1D8 TBC1 domain family member 8 2 2
MIRT447791 NUPL2 nucleoporin like 2 2 2
MIRT447963 WDR77 WD repeat domain 77 2 2
MIRT448311 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT448363 TSR1 TSR1, ribosome maturation factor 2 6
MIRT448389 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT448801 GLIS3 GLIS family zinc finger 3 2 2
MIRT450193 TMEM9B TMEM9 domain family member B 2 2
MIRT453365 ZNF3 zinc finger protein 3 2 2
MIRT453579 CRCP CGRP receptor component 2 2
MIRT454815 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT455376 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT456971 SPAM1 sperm adhesion molecule 1 2 2
MIRT458297 FUT10 fucosyltransferase 10 2 2
MIRT458872 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT460528 S100A11 S100 calcium binding protein A11 2 4
MIRT462130 AKR7A2 aldo-keto reductase family 7 member A2 2 4
MIRT463268 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT463618 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT465229 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT465831 TMEM64 transmembrane protein 64 2 2
MIRT466460 TFAM transcription factor A, mitochondrial 2 8
MIRT467891 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468847 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT469854 PXK PX domain containing serine/threonine kinase like 2 8
MIRT469885 PURB purine rich element binding protein B 2 4
MIRT470448 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 8
MIRT471867 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT472053 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT472163 NIN ninein 2 4
MIRT474279 LARP1 La ribonucleoprotein domain family member 1 2 6
MIRT474602 KLF6 Kruppel like factor 6 2 2
MIRT475468 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT476648 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT476878 FEM1B fem-1 homolog B 2 2
MIRT476906 FBXL5 F-box and leucine rich repeat protein 5 2 12
MIRT477188 F3 coagulation factor III, tissue factor 2 8
MIRT477291 ERGIC2 ERGIC and golgi 2 2 2
MIRT478410 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT479045 COIL coilin 2 10
MIRT479061 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT479273 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT480523 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480557 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT480781 BMP2 bone morphogenetic protein 2 2 2
MIRT481213 ATXN7L3B ataxin 7 like 3B 2 2
MIRT481341 ATL3 atlastin GTPase 3 2 2
MIRT481800 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT481934 ANKRD11 ankyrin repeat domain 11 2 12
MIRT481962 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT484826 ZNFX1 zinc finger NFX1-type containing 1 2 4
MIRT484913 ZFYVE26 zinc finger FYVE-type containing 26 2 4
MIRT485132 RRAS2 RAS related 2 2 6
MIRT485197 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 4
MIRT492016 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT492366 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493120 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT493391 KIAA0513 KIAA0513 2 6
MIRT493668 HBP1 HMG-box transcription factor 1 2 2
MIRT494069 DUSP2 dual specificity phosphatase 2 2 4
MIRT494385 SOLH calpain 15 1 1
MIRT494776 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT496737 TRIM31 tripartite motif containing 31 2 2
MIRT497422 FAM46A family with sequence similarity 46 member A 2 2
MIRT498160 FEM1C fem-1 homolog C 2 8
MIRT498357 ABHD17B abhydrolase domain containing 17B 2 2
MIRT499911 KIAA1191 KIAA1191 2 4
MIRT500764 TMEM127 transmembrane protein 127 2 6
MIRT501461 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501956 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT502368 GIGYF1 GRB10 interacting GYF protein 1 2 8
MIRT502408 GATA6 GATA binding protein 6 2 8
MIRT503445 GINS4 GINS complex subunit 4 2 4
MIRT503565 MDM2 MDM2 proto-oncogene 2 4
MIRT503614 ZNF780A zinc finger protein 780A 2 2
MIRT503833 TMEM242 transmembrane protein 242 2 4
MIRT504102 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT505495 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505741 SEPT2 septin 2 2 4
MIRT505977 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT506229 PFKP phosphofructokinase, platelet 2 8
MIRT506432 NAGK N-acetylglucosamine kinase 2 6
MIRT506455 NACC2 NACC family member 2 2 4
MIRT506515 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506626 MARCH6 membrane associated ring-CH-type finger 6 2 8
MIRT506677 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT506839 KIF23 kinesin family member 23 2 4
MIRT506866 KIAA1147 KIAA1147 2 2
MIRT507190 FZD9 frizzled class receptor 9 2 6
MIRT507236 FOXK2 forkhead box K2 2 4
MIRT507363 FAM129A family with sequence similarity 129 member A 2 6
MIRT508089 ANKRD52 ankyrin repeat domain 52 2 2
MIRT508230 ZNF850 zinc finger protein 850 2 6
MIRT511090 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511258 KLHL36 kelch like family member 36 2 6
MIRT512681 ENO4 enolase family member 4 2 2
MIRT512754 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT513471 NARS asparaginyl-tRNA synthetase 2 6
MIRT513903 GRB10 growth factor receptor bound protein 10 2 6
MIRT513985 CEP97 centrosomal protein 97 2 2
MIRT513999 CENPQ centromere protein Q 2 4
MIRT514036 BNIP2 BCL2 interacting protein 2 2 2
MIRT514106 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT515002 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT517025 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT517533 ITM2C integral membrane protein 2C 2 6
MIRT517825 KIAA2018 upstream transcription factor family member 3 2 4
MIRT524333 CRLF3 cytokine receptor like factor 3 2 4
MIRT524700 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525208 ZNF93 zinc finger protein 93 2 2
MIRT527210 XIRP2 xin actin binding repeat containing 2 2 2
MIRT527478 CLEC12B C-type lectin domain family 12 member B 2 4
MIRT527889 SERF1B small EDRK-rich factor 1B 2 2
MIRT529345 SERF1A small EDRK-rich factor 1A 2 2
MIRT529613 H1F0 H1 histone family member 0 2 2
MIRT531822 ZNF264 zinc finger protein 264 2 6
MIRT531843 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT532091 RTTN rotatin 2 2
MIRT533391 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT533837 TGFBR2 transforming growth factor beta receptor 2 2 6
MIRT533885 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT534006 SUV420H1 lysine methyltransferase 5B 2 2
MIRT534053 STC2 stanniocalcin 2 2 2
MIRT534635 RNASEH1 ribonuclease H1 2 4
MIRT537732 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537782 EIF4H eukaryotic translation initiation factor 4H 2 6
MIRT538015 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT538717 CAPRIN2 caprin family member 2 2 4
MIRT539719 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT540521 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT541290 GLO1 glyoxalase I 2 2
MIRT541747 ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 2 2
MIRT542030 PEX2 peroxisomal biogenesis factor 2 2 2
MIRT542067 SLC25A46 solute carrier family 25 member 46 2 2
MIRT542509 WDR13 WD repeat domain 13 2 2
MIRT542717 RPS15A ribosomal protein S15a 2 2
MIRT542890 KLHL15 kelch like family member 15 2 4
MIRT542953 GDF11 growth differentiation factor 11 2 2
MIRT543588 RPF2 ribosome production factor 2 homolog 2 6
MIRT544312 IFNGR1 interferon gamma receptor 1 2 4
MIRT545143 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT545210 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546255 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546294 TMEM200C transmembrane protein 200C 2 4
MIRT546459 SLC5A3 solute carrier family 5 member 3 2 4
MIRT546821 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT546843 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT547089 PLRG1 pleiotropic regulator 1 2 2
MIRT548229 FJX1 four jointed box 1 2 4
MIRT548339 EPHA4 EPH receptor A4 2 2
MIRT548392 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548464 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548861 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549108 C16orf70 chromosome 16 open reading frame 70 2 4
MIRT549252 ATXN1 ataxin 1 2 2
MIRT549415 ADAR adenosine deaminase, RNA specific 2 2
MIRT549830 LUZP2 leucine zipper protein 2 2 2
MIRT550101 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT550109 TAF6 TATA-box binding protein associated factor 6 2 2
MIRT550242 PVR poliovirus receptor 2 4
MIRT552212 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT552640 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT552693 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT553033 USP48 ubiquitin specific peptidase 48 2 2
MIRT553475 TNKS2 tankyrase 2 2 2
MIRT554302 SIPA1L2 signal induced proliferation associated 1 like 2 2 2
MIRT554330 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT554476 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554531 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT554562 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT554612 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554745 RHOC ras homolog family member C 2 2
MIRT554803 RGMB repulsive guidance molecule family member b 2 4
MIRT555000 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555166 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT555242 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT556282 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT557830 FOXJ2 forkhead box J2 2 2
MIRT558221 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558332 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558943 CBX1 chromobox 1 2 2
MIRT558965 CAMLG calcium modulating ligand 2 4
MIRT559440 ARSJ arylsulfatase family member J 2 2
MIRT561378 TXNIP thioredoxin interacting protein 2 2
MIRT561646 RUNX3 runt related transcription factor 3 2 2
MIRT562223 HMGB2 high mobility group box 2 2 2
MIRT562560 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562973 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT563387 DSPP dentin sialophosphoprotein 2 2
MIRT563439 TRIM27 tripartite motif containing 27 2 2
MIRT565554 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 2
MIRT566879 LRP12 LDL receptor related protein 12 2 2
MIRT567051 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567121 ITGB1 integrin subunit beta 1 2 2
MIRT567551 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567628 FAM210A family with sequence similarity 210 member A 2 2
MIRT567785 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT567917 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT570955 RBM12B RNA binding motif protein 12B 2 2
MIRT571022 CKAP2 cytoskeleton associated protein 2 2 2
MIRT571221 F2R coagulation factor II thrombin receptor 2 2
MIRT571702 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT571732 RPL17-C18orf32 RPL17-C18orf32 readthrough 2 2
MIRT571862 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT572151 DESI1 desumoylating isopeptidase 1 2 2
MIRT572217 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT573377 LIMA1 LIM domain and actin binding 1 2 2
MIRT573924 SNAP47 synaptosome associated protein 47 2 2
MIRT574720 HAUS8 HAUS augmin like complex subunit 8 2 2
MIRT575857 Rab1 RAB1A, member RAS oncogene family 1 1
MIRT608982 PRKCB protein kinase C beta 2 2
MIRT611007 BRI3BP BRI3 binding protein 2 2
MIRT613680 SH3KBP1 SH3 domain containing kinase binding protein 1 2 2
MIRT615455 FAXC failed axon connections homolog 2 2
MIRT615880 MEMO1 mediator of cell motility 1 2 2
MIRT616444 FAM126B family with sequence similarity 126 member B 2 2
MIRT623529 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT624425 CBX8 chromobox 8 2 2
MIRT625087 C15orf41 chromosome 15 open reading frame 41 2 2
MIRT634463 PAK6 p21 (RAC1) activated kinase 6 2 2
MIRT640011 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT641801 USP32 ubiquitin specific peptidase 32 2 2
MIRT664802 LIAS lipoic acid synthetase 2 4
MIRT682525 GJD3 gap junction protein delta 3 2 2
MIRT688719 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT693162 THEM4 thioesterase superfamily member 4 2 2
MIRT694572 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT699679 SFT2D2 SFT2 domain containing 2 2 2
MIRT701600 MYPN myopalladin 2 2
MIRT701967 MINK1 misshapen like kinase 1 2 2
MIRT702948 HIPK3 homeodomain interacting protein kinase 3 2 2
MIRT702962 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT709508 RHOH ras homolog family member H 2 2
MIRT725232 PEA15 phosphoprotein enriched in astrocytes 15 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-5p Temozolomide 5394 NSC362856 approved sensitive High Glioma tissue
hsa-miR-548ah-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-548ah-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-548ah-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-548ah-5p Cetuximab resistant tissue (colorectal carcinoma)

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