pre-miRNA Information
pre-miRNA hsa-mir-497   
Genomic Coordinates chr17: 7017911 - 7018022
Synonyms MIRN497, hsa-mir-497, MIR497
Description Homo sapiens miR-497 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-497-3p
Sequence 64| CAAACCACACUGUGGUGUUAGA |85
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 17 - 7017957 29233923 MiREDiBase
A-to-I 4 17 - 7017956 29233923 MiREDiBase
A-to-I 20 17 - 7017940 24964909, 25521855, 27229138, 29165639, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1413601274 5 dbSNP
rs1028648384 6 dbSNP
rs1479092960 9 dbSNP
rs1261056598 10 dbSNP
rs997278260 11 dbSNP
rs1324708562 13 dbSNP
rs755634302 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GANAB   
Synonyms G2AN, GIIA, GLUII, PKD3
Description glucosidase II alpha subunit
Transcript NM_198334   
Other Transcripts NM_198335   
Expression
Putative miRNA Targets on GANAB
3'UTR of GANAB
(miRNA target sites are highlighted)
>GANAB|NM_198334|3'UTR
   1 CCCAAGGGATGTTCTGGGTTAGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGAGTTCG
  81 GCCCTCCCCAGACTTCACTTATGCTAGTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
 161 GCTCCAAATTCCTCTTGTGATCTCCTCACCTCTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCT
 241 GTTGCTCTAACTGGAGCACATTCACTTACGAACACCAGGAAACCACAGGGCCCTTGTCGCCCCTTCTCTTTCCCTTATTT
 321 AGGAGCCCTGAACTCCCCCAGAGTCTATCCATTCATGCCTCTTGTATGTTGATGCCACTTCTTGGAAGAAGATGAGGGCA
 401 ATGAGTTAGGGCTCCTTTTCCCCTTCCCTCCCACCAGATTGCTCTCCCACCTTTCATTTCTTCCTCCAGGCTTTACTCCC
 481 CTTTTTATGCCCCACCGATACACTGGGACCACCCCTTACCCCGGACAGGATGAATGGATCAAAGGAGTGAGGTTGCTAAA
 561 GAACATCCTTTTCCCTCTCATTCTACCCTTTTCCTCTCCCCGATTCCTTGTAGAGCTGCTGCAATTCTTAGAGGGGCAGT
 641 TCTACCTCCTCTGTCCCTCGGCAGAAAGACGTTTCCACACCTCTTAGGGGATGCGCATTAAACTTCTTTTGCCCCCTTCT
 721 TGTCCCCTTTGAGGGGCACTTAAGATGGAGAAATCAGTTGTGGTTTCAGTGAATCATGGTCACCTGTATTTATTGCTAGG
 801 AGAAGCCTGAGGGTGGGGGGAGATGATCATGTGTGCTCGGGGTTGGCTGGAAGCCCTGGGTGGGGGGTTGGGGGAGGACT
 881 AATGGGGAGTCGGGGAATATTTGTGGGTATTTTTTTTACTTCCTCTTGGTTCCCAGCTGTGACACGTTTTGATCAAAGGA
 961 GAAACAATAAAGGGATAAACCATAAATAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agaUUGUGGUGUCACACCAAAc 5'
             :| |:|| : |||||||| 
Target 5' ggaGAAATCA-GTTGTGGTTTc 3'
747 - 767 154.00 -11.60
2
miRNA  3' agaUUGUGGUGUCACACCAAac 5'
             | ||  : |||| ||||  
Target 5' tggATCAAAGGAGTGAGGTTgc 3'
535 - 556 107.00 -10.70
3
miRNA  3' agAUUGUGGUGUC-ACAC----CAAAc 5'
            |::: || ||| ||||    |||| 
Target 5' ctTGGTTCC-CAGCTGTGACACGTTTt 3'
925 - 950 103.00 -8.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31558181 59 COSMIC
COSN30111219 69 COSMIC
COSN30111218 70 COSMIC
COSN30157191 89 COSMIC
COSN28862239 168 COSMIC
COSN25243852 269 COSMIC
COSN31553443 441 COSMIC
COSN30542812 463 COSMIC
COSN31592823 496 COSMIC
COSN21454057 549 COSMIC
COSN31597470 571 COSMIC
COSN5916174 695 COSMIC
COSN21395378 917 COSMIC
COSN18930450 925 COSMIC
COSN24490324 950 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1375986610 1 dbSNP
rs1330546453 2 dbSNP
rs1044641546 6 dbSNP
rs200956498 11 dbSNP
rs747948615 14 dbSNP
rs1404054243 16 dbSNP
rs765191082 22 dbSNP
rs752771425 23 dbSNP
rs765193755 27 dbSNP
rs1339896709 33 dbSNP
rs1175779135 34 dbSNP
rs759447048 36 dbSNP
rs1239302601 37 dbSNP
rs553565070 42 dbSNP
rs1181128954 44 dbSNP
rs753825555 46 dbSNP
rs1253696019 47 dbSNP
rs1208855944 48 dbSNP
rs1312344708 50 dbSNP
rs952041936 51 dbSNP
rs920885991 53 dbSNP
rs778797237 55 dbSNP
rs1203132672 56 dbSNP
rs1255391460 57 dbSNP
rs796525964 58 dbSNP
rs1191757140 62 dbSNP
rs1442499951 63 dbSNP
rs754829169 66 dbSNP
rs141471770 70 dbSNP
rs1169224427 71 dbSNP
rs1422660220 76 dbSNP
rs976850831 79 dbSNP
rs189567845 80 dbSNP
rs146543067 81 dbSNP
rs1432789706 86 dbSNP
rs1355366282 87 dbSNP
rs1317572183 98 dbSNP
rs1326735950 104 dbSNP
rs986046189 108 dbSNP
rs1031341434 113 dbSNP
rs536835261 114 dbSNP
rs968925124 115 dbSNP
rs1223171372 118 dbSNP
rs559615967 129 dbSNP
rs1328333905 131 dbSNP
rs1021882378 132 dbSNP
rs904179937 137 dbSNP
rs547099748 139 dbSNP
rs374003721 147 dbSNP
rs573683091 171 dbSNP
rs1284191546 172 dbSNP
rs779598404 180 dbSNP
rs1447901911 181 dbSNP
rs1010526508 187 dbSNP
rs891453680 188 dbSNP
rs1479889062 189 dbSNP
rs1050135407 191 dbSNP
rs1199769899 194 dbSNP
rs996757143 196 dbSNP
rs185154133 202 dbSNP
rs1402811966 205 dbSNP
rs1385605416 209 dbSNP
rs1321301335 219 dbSNP
rs1402421979 219 dbSNP
rs564470422 220 dbSNP
rs557002169 221 dbSNP
rs1284183222 226 dbSNP
rs907961710 227 dbSNP
rs749943092 228 dbSNP
rs1044201524 231 dbSNP
rs117685098 232 dbSNP
rs768066030 241 dbSNP
rs980787363 243 dbSNP
rs757819322 245 dbSNP
rs575855623 247 dbSNP
rs180937079 263 dbSNP
rs917472962 268 dbSNP
rs542383941 269 dbSNP
rs1180432079 271 dbSNP
rs1363916225 273 dbSNP
rs1238467909 287 dbSNP
rs551774837 292 dbSNP
rs929255748 298 dbSNP
rs1161659006 301 dbSNP
rs1199598831 302 dbSNP
rs992957435 316 dbSNP
rs1425077166 328 dbSNP
rs1334650684 329 dbSNP
rs1303947809 338 dbSNP
rs1271771205 339 dbSNP
rs1461084963 345 dbSNP
rs1393175940 347 dbSNP
rs1389939670 349 dbSNP
rs573076836 356 dbSNP
rs1336501857 357 dbSNP
rs944107950 364 dbSNP
rs1237676030 365 dbSNP
rs1352804024 366 dbSNP
rs1309853791 369 dbSNP
rs1031415130 371 dbSNP
rs911304334 374 dbSNP
rs1376909563 375 dbSNP
rs1302293629 376 dbSNP
rs752073689 378 dbSNP
rs1361053250 380 dbSNP
rs1157268808 381 dbSNP
rs1419475305 385 dbSNP
rs553182716 386 dbSNP
rs1381360169 391 dbSNP
rs1160848009 395 dbSNP
rs574453455 396 dbSNP
rs1256075682 397 dbSNP
rs968865554 401 dbSNP
rs764374413 405 dbSNP
rs1238843956 407 dbSNP
rs6916 411 dbSNP
rs1487828381 413 dbSNP
rs1286402079 419 dbSNP
rs1242085953 420 dbSNP
rs968811908 420 dbSNP
rs1319781688 422 dbSNP
rs1311934055 429 dbSNP
rs1228949450 430 dbSNP
rs1384571844 433 dbSNP
rs1381517097 434 dbSNP
rs1444969254 436 dbSNP
rs1296545195 441 dbSNP
rs914771881 444 dbSNP
rs1028006567 448 dbSNP
rs763336696 450 dbSNP
rs1361447570 456 dbSNP
rs1300366215 457 dbSNP
rs766091367 464 dbSNP
rs111294759 465 dbSNP
rs776585548 465 dbSNP
rs901098228 466 dbSNP
rs760490276 476 dbSNP
rs1423861791 477 dbSNP
rs772801273 478 dbSNP
rs370839982 480 dbSNP
rs1477266781 484 dbSNP
rs1335256857 485 dbSNP
rs771117093 487 dbSNP
rs1218441262 490 dbSNP
rs1487416259 492 dbSNP
rs1264789649 493 dbSNP
rs1222264656 494 dbSNP
rs1382665349 495 dbSNP
rs528749214 496 dbSNP
rs1276343261 497 dbSNP
rs1218099074 500 dbSNP
rs1226171119 501 dbSNP
rs1306178269 501 dbSNP
rs1251537933 505 dbSNP
rs111241392 509 dbSNP
rs1201258231 512 dbSNP
rs576575660 516 dbSNP
rs969792175 519 dbSNP
rs770321873 520 dbSNP
rs746302915 522 dbSNP
rs1427706635 523 dbSNP
rs556867025 523 dbSNP
rs1390521495 524 dbSNP
rs1047579516 526 dbSNP
rs1294612846 533 dbSNP
rs1174322379 537 dbSNP
rs993352744 548 dbSNP
rs901771165 558 dbSNP
rs1044417980 561 dbSNP
rs1360232662 566 dbSNP
rs1382045631 568 dbSNP
rs1041016691 570 dbSNP
rs944039780 574 dbSNP
rs948687116 577 dbSNP
rs1221348982 580 dbSNP
rs1815835 586 dbSNP
rs917536739 587 dbSNP
rs993031160 588 dbSNP
rs1815836 589 dbSNP
rs934858110 591 dbSNP
rs1195482560 593 dbSNP
rs114214376 594 dbSNP
rs1049827273 599 dbSNP
rs765423503 601 dbSNP
rs1485393159 602 dbSNP
rs1186864465 606 dbSNP
rs568309359 624 dbSNP
rs759626724 626 dbSNP
rs914719383 631 dbSNP
rs1428610035 634 dbSNP
rs1355984441 642 dbSNP
rs554545557 645 dbSNP
rs1480808798 655 dbSNP
rs1178822613 656 dbSNP
rs1310197430 659 dbSNP
rs1453741618 660 dbSNP
rs1289786046 670 dbSNP
rs1028456794 671 dbSNP
rs1402707723 675 dbSNP
rs1815837 676 dbSNP
rs1282259372 679 dbSNP
rs1345550066 680 dbSNP
rs1233811814 686 dbSNP
rs956280571 687 dbSNP
rs534952134 688 dbSNP
rs981754541 690 dbSNP
rs1216487884 691 dbSNP
rs866211002 694 dbSNP
rs565872739 695 dbSNP
rs1436997854 697 dbSNP
rs552447341 699 dbSNP
rs1220446907 703 dbSNP
rs533419790 704 dbSNP
rs1316134770 711 dbSNP
rs1192973725 724 dbSNP
rs1405939903 736 dbSNP
rs1419001292 738 dbSNP
rs1160547615 741 dbSNP
rs1420935875 742 dbSNP
rs570969276 757 dbSNP
rs1815838 769 dbSNP
rs1365785750 782 dbSNP
rs774465046 801 dbSNP
rs1438219026 802 dbSNP
rs1295941724 803 dbSNP
rs550920016 806 dbSNP
rs951818058 813 dbSNP
rs1452186020 815 dbSNP
rs1026076723 816 dbSNP
rs993300182 817 dbSNP
rs1224143684 823 dbSNP
rs1231237090 824 dbSNP
rs1480357491 828 dbSNP
rs1178217570 829 dbSNP
rs1283620597 838 dbSNP
rs901721411 839 dbSNP
rs1443378626 840 dbSNP
rs1478564400 843 dbSNP
rs1222601865 846 dbSNP
rs1005647313 848 dbSNP
rs530834600 852 dbSNP
rs1007504357 854 dbSNP
rs1167890417 855 dbSNP
rs1353343417 857 dbSNP
rs1442337004 859 dbSNP
rs562139070 860 dbSNP
rs887217529 861 dbSNP
rs768525281 862 dbSNP
rs1230183477 867 dbSNP
rs1210338177 868 dbSNP
rs1310648881 869 dbSNP
rs1306954410 871 dbSNP
rs1199323731 872 dbSNP
rs889765354 874 dbSNP
rs1183571552 875 dbSNP
rs1460365290 875 dbSNP
rs1219521531 883 dbSNP
rs1049774303 889 dbSNP
rs542139484 891 dbSNP
rs1418376552 892 dbSNP
rs914665637 897 dbSNP
rs1172156095 900 dbSNP
rs1403350004 901 dbSNP
rs1053237833 910 dbSNP
rs202127265 918 dbSNP
rs934820105 918 dbSNP
rs190565425 943 dbSNP
rs559515045 945 dbSNP
rs545990059 967 dbSNP
rs754361813 971 dbSNP
rs1026841015 976 dbSNP
rs576487799 977 dbSNP
rs1203513439 980 dbSNP
rs951765499 982 dbSNP
rs1360467169 987 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agaUUGUGGUGUCACACCAAac 5'
             :| |:|| : |||||||  
Target 5' ggaGAAAUCA-GUUGUGGUU-- 3'
2 - 20
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000346178.4 | 3UTR | UGGAGAAAUCAGUUGUGGUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer -0.606 8.5e-4 -0.665 2.0e-4 24 Click to see details
GSE26953 Aortic valvular endothelial cells -0.562 2.1e-3 -0.417 2.1e-2 24 Click to see details
GSE19350 CNS germ cell tumors -0.652 1.1e-2 -0.322 1.5e-1 12 Click to see details
GSE42095 Differentiated embryonic stem cells -0.417 2.4e-2 -0.333 6.0e-2 23 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.339 4.9e-2 0.403 2.3e-2 25 Click to see details
GSE28260 Renal cortex and medulla -0.293 1.7e-1 -0.444 6.4e-2 13 Click to see details
GSE21687 Ependynoma primary tumors -0.103 2.1e-1 -0.141 1.3e-1 64 Click to see details
GSE38226 Liver fibrosis -0.167 2.3e-1 -0.142 2.7e-1 21 Click to see details
GSE17498 Multiple myeloma 0.071 3.3e-1 0.039 4.1e-1 40 Click to see details
GSE32688 Pancreatic cancer 0.073 3.5e-1 0.253 8.1e-2 32 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.002 5.0e-1 0.171 2.4e-1 20 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.002 5.0e-1 0.171 2.4e-1 20 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.002 5.0e-1 0.171 2.4e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KICH 0.481 0.03 0.557 0.02 15 Click to see details
LUAD -0.925 0.04 -0.800 0.1 4 Click to see details
HNSC -0.375 0.06 -0.193 0.22 18 Click to see details
LIHC -0.22 0.12 -0.253 0.09 30 Click to see details
KIRC 0.172 0.14 0.165 0.15 43 Click to see details
ESCA 0.36 0.15 0.188 0.3 10 Click to see details
UCEC -0.244 0.18 -0.165 0.27 16 Click to see details
KIRP -0.188 0.21 -0.197 0.2 21 Click to see details
PRAD 0.121 0.21 0.180 0.12 46 Click to see details
BLCA -0.439 0.28 -0.200 0.4 4 Click to see details
BRCA 0.092 0.28 0.146 0.18 42 Click to see details
LUSC -0.11 0.28 -0.125 0.26 30 Click to see details
PAAD -0.422 0.29 -0.600 0.2 4 Click to see details
CHOL -0.273 0.3 0.200 0.35 6 Click to see details
THCA 0.062 0.34 0.164 0.14 45 Click to see details
STAD 0.04 0.43 -0.053 0.41 21 Click to see details
STAD 0.04 0.43 -0.053 0.41 21 Click to see details
STAD 0.04 0.43 -0.053 0.41 21 Click to see details
STAD 0.04 0.43 -0.053 0.41 21 Click to see details
95 hsa-miR-497-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092955 CYP2U1 cytochrome P450 family 2 subfamily U member 1 2 4
MIRT124568 PRRC2B proline rich coiled-coil 2B 2 2
MIRT125196 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT147296 KPNA2 karyopherin subunit alpha 2 2 8
MIRT163999 KIAA1109 KIAA1109 2 4
MIRT252495 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT357969 GRPEL2 GrpE like 2, mitochondrial 2 2
MIRT443007 TRIOBP TRIO and F-actin binding protein 2 2
MIRT443524 NETO1 neuropilin and tolloid like 1 2 2
MIRT443573 EVX2 even-skipped homeobox 2 2 2
MIRT443656 BACH1 BTB domain and CNC homolog 1 2 2
MIRT460670 KRT10 keratin 10 2 8
MIRT464761 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT465032 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT465040 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT468667 SEC62 SEC62 homolog, preprotein translocation factor 2 2
MIRT473694 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT477618 EFNA3 ephrin A3 2 2
MIRT480506 C11orf57 chromosome 11 open reading frame 57 2 2
MIRT480592 BUB3 BUB3, mitotic checkpoint protein 2 2
MIRT486915 ZNF398 zinc finger protein 398 2 6
MIRT487770 ANKEF1 ankyrin repeat and EF-hand domain containing 1 2 16
MIRT493265 MDFIC MyoD family inhibitor domain containing 2 2
MIRT495271 SLC1A2 solute carrier family 1 member 2 2 4
MIRT495309 CHST12 carbohydrate sulfotransferase 12 2 2
MIRT496681 DPP6 dipeptidyl peptidase like 6 2 4
MIRT496891 FOXP1 forkhead box P1 2 2
MIRT497330 IRF4 interferon regulatory factor 4 2 2
MIRT498272 KIAA1644 KIAA1644 2 2
MIRT498634 CHD4 chromodomain helicase DNA binding protein 4 2 10
MIRT500581 USP53 ubiquitin specific peptidase 53 2 2
MIRT500751 TMPPE transmembrane protein with metallophosphoesterase domain 2 6
MIRT509668 ZNF354B zinc finger protein 354B 2 10
MIRT510919 PSMA2 proteasome subunit alpha 2 2 4
MIRT519118 CEP76 centrosomal protein 76 2 2
MIRT526193 ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) 2 2
MIRT526746 HLA-DOB major histocompatibility complex, class II, DO beta 2 2
MIRT527270 FBLN2 fibulin 2 2 2
MIRT528198 PLEKHM2 pleckstrin homology and RUN domain containing M2 2 2
MIRT528330 TBC1D22B TBC1 domain family member 22B 2 2
MIRT530346 GABRB3 gamma-aminobutyric acid type A receptor beta3 subunit 2 2
MIRT533627 TMX3 thioredoxin related transmembrane protein 3 2 2
MIRT533738 TMEM200C transmembrane protein 200C 2 2
MIRT533779 TMEM133 transmembrane protein 133 2 2
MIRT534317 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT538438 COG5 component of oligomeric golgi complex 5 2 2
MIRT539156 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT539474 ADARB2 adenosine deaminase, RNA specific B2 (inactive) 2 2
MIRT539620 SHISA9 shisa family member 9 2 2
MIRT539650 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT540346 OPHN1 oligophrenin 1 2 2
MIRT540412 PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 2 2
MIRT541200 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 2
MIRT541395 CDC27 cell division cycle 27 2 2
MIRT546443 SNX5 sorting nexin 5 2 2
MIRT547369 MSI2 musashi RNA binding protein 2 2 2
MIRT553288 TSPAN3 tetraspanin 3 2 2
MIRT554402 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT557822 FOXN2 forkhead box N2 2 2
MIRT568530 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT569508 THYN1 thymocyte nuclear protein 1 2 2
MIRT570707 FAM69A family with sequence similarity 69 member A 2 2
MIRT608376 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT608483 NKTR natural killer cell triggering receptor 2 6
MIRT613533 TRA2B transformer 2 beta homolog 2 2
MIRT616601 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT618166 DUSP18 dual specificity phosphatase 18 2 2
MIRT632059 CEP135 centrosomal protein 135 2 2
MIRT647379 ZDHHC23 zinc finger DHHC-type containing 23 2 2
MIRT648366 POTED POTE ankyrin domain family member D 2 2
MIRT651075 ZNF518B zinc finger protein 518B 2 4
MIRT653618 SLC30A4 solute carrier family 30 member 4 2 2
MIRT653636 SLC30A1 solute carrier family 30 member 1 2 2
MIRT654895 POU2F1 POU class 2 homeobox 1 2 2
MIRT656232 MFSD6 major facilitator superfamily domain containing 6 2 2
MIRT659880 CAPRIN1 cell cycle associated protein 1 2 2
MIRT660526 ARL4C ADP ribosylation factor like GTPase 4C 2 2
MIRT666286 SLC30A3 solute carrier family 30 member 3 2 2
MIRT686808 SNX2 sorting nexin 2 2 4
MIRT695302 TK1 thymidine kinase 1 2 2
MIRT699737 SERINC3 serine incorporator 3 2 2
MIRT700794 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT712270 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT712617 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT714264 RPL10A ribosomal protein L10a 2 2
MIRT715072 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT715386 TADA3 transcriptional adaptor 3 2 2
MIRT716397 NPAS1 neuronal PAS domain protein 1 2 2
MIRT725328 NFASC neurofascin 2 2
MIRT725503 GANAB glucosidase II alpha subunit 2 2
MIRT732913 IRAK2 interleukin 1 receptor associated kinase 2 3 0
MIRT734890 SMAD3 SMAD family member 3 3 0
MIRT737328 LINC02476 long intergenic non-protein coding RNA 2476 3 0
MIRT737544 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 4 0
MIRT755545 PAK1 p21 (RAC1) activated kinase 1 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-497 Bufalin NULL 9547215 Quantitative real-time PCR colorectal cancer HCT116 cells 24375248 2014 up-regulated
miR-497 Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 up-regulated
miR-497 Ethanol NULL 702 Quantitative real-time PCR CIE10 22141737 2012 up-regulated
miR-497 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
miR-497 Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-497 Tamoxifen 2733525 NSC180973 approved sensitive Low Breast Cancer cell line (MCF-7, T47D)
hsa-mir-497 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-497 Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-497 Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-mir-497 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-497 Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-mir-497 Tamoxifen 2733525 NSC180973 approved sensitive cell line (MCF7)
hsa-mir-497 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-497-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (BT-20, BT-474, BT-549, CAMA-1, HCC1143, HCC1395, HCC1569, HCC1806, HCC-1937, HCC1954, HCC202, HCC38, HCC70, Hs578T, MCF-7, MDA-MB-175VII, MDA-MB-231, MDA-MB-361, MDA-MB-415, MDA-MB-436, MDA-MB-468, SKBR3, T47D, UACC812, EVSA-T, MPE-600 , SK-BR-
hsa-miR-497-3p Docetaxel 148124 NSC628503 approved resistant High Breast Cancer cell line (MDA-MB-231, MCF-7)
hsa-miR-497-3p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, PC-9)
hsa-miR-497-3p Cisplatin 5460033 NSC119875 approved resistant Low Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-497-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-497-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-497-3p Cisplatin 5460033 NSC119875 approved resistant tissue
hsa-miR-497-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-497-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-497-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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