miRTarBase - #MIRT755767


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pre-miRNA Information
pre-miRNA hsa-mir-4796   
Genomic Coordinates chr3: 114743445 - 114743525
Description Homo sapiens miR-4796 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4796-5p
Sequence 9| UGUCUAUACUCUGUCACUUUAC |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1466952984 15 dbSNP
rs887451291 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol BRCC3   
Synonyms BRCC36, C6.1A, CXorf53
Description BRCA1/BRCA2-containing complex subunit 3
Transcript NM_001018055   
Other Transcripts NM_024332   
Expression
Putative miRNA Targets on BRCC3
3'UTR of BRCC3
(miRNA target sites are highlighted)		 
>BRCC3|NM_001018055|3'UTR
   1 ATCAGGAGACAAAATGGGGAAAGATGAAAATATCCAGTGTAAAGTTACTTAAGCTAAATCAATTTCAAAGAAGAAAAACT
  81 TGGAGGACTCATTTTACCTGACTTCAAGACTTACTATAAAGCTATAGTAATCAAGATAGATGGTATTGGCAGAGGAACAG
 161 ACACATACGTCAATGGAACAGATGAGAGAACCCAGAAATAAACCCATATAAATATGCTCAGCTGATTTTGAAAAAGTGAA
 241 AAAGCAATTCAATGGAGGAAGAATAGCCTTTCTGACAAATTATGCTAGAGCAATTAGACACCCATGGCGAGGAGAAAAAA
 321 GAACCTCTACTTAAACCTCACATCTTATATAAAATTTAACTCAAAATGTATAACGGACTTAAATGTGATACATAAAACTA
 401 GATAACTTTGAAAAAAGCCACAGGAGAAAAATCTTCAGGATCTTGGGCTAGGTGACAAGTTCTTGGACTTTGCCCCGAAA
 481 GCACATCCATAAAAGACAAAATCTGATATATTGGACTTCTTCAAAATTTAAAAACTTGTGATTTAAGAAGAGGAAAAGAT
 561 AAGCTACAGATTGAGATGAATTTGCAAACCATATATCTGATCAATTTGGAATATATAAAGTGTACTAAAAACTCAACTGA
 641 AGTCAGGCATGGTAGCTCATGCTTGTAATCTCACCACTTTGGGAGGCCAAGATGGGAGGAGTGCTTGAGGTTAGGCGTTC
 721 CAGACCAGCCTGGGCAACATAGTGAGACTCTTGTCTCTACAAAAAGTTTTTTTAAAAAATTAACTGGGCACCATGACACA
 801 CACCAGTAGTCCCAGCTACTAGGGAGGCAGGAGGATCACTTGAGCCCAGGAGTTTGAGGCTGCGGTGAGCTGTGATCACA
 881 CCACCACACTCCAACCTGTGTAACAGAGTGAGGCCTCATCTCAAAAAAAAAAAAAGGCCACAAAACTCAACAATAAAAAC
 961 AAACAGTCCAATTAGAAAATGGGCAAAAGACATGAATAGATGTTTCACTGAAGAGGATCTATAGATGGCAAGTAAGCATA
1041 TGAAAAGCTGTTAAACTCCATAAGTCATCAGGGAATGCAAATTGAAACCACAGCGAGGCTATGACTTACTTATCTCAATG
1121 GCTAAAGAAAAAATAGTGAAAATACCAAATACTGATGAGGATACAAACTGGATATTTTATACATTGCTGACAGGAATGTA
1201 AAATGGTACAGCCACTCTGGGAAAGAGTTTATGAATTTCTTATCAAGTTAAACATAATTTTTTAATCAAGTTAAACATAA
1281 GACCCAGCAGTTGTGCTCCTGGACATTCATTCCAGAGAAATGAAAACCTATATTGTACTTGTACTCAAATATTCATAGGA
1361 GCTTTATTTGTAATAGCCCCAAACTGGAAACAACCCAGATGTCCTACAACAGGTACATGGTTAAACAAACCATCCATAAC
1441 TTGGAATACTGCTCTGGAATGAAAAGGAACTAACTGTTGATACAAGAACTTGGTTGTACCTCAGGGGTATTATGGTGAAC
1521 AAAAAAAAAACCAGTCTCAAATGGTCACATACTGTATGATCGCATTTATATAACATTCTTGAGGTGACAAAATTATTGAA
1601 ATGAAGAACAGATTAATGGTTGCCAGGGATAGGGACTGGAGGGGGTGTGGGGTATGTATGACTATAAAGGGATGACGCAA
1681 GGAGTTCCTTTGTGCTGATGGAACAGTTCTATATGATTATGATGATTACGATGTTGATTATAACATTTGATTATGAGGTT
1761 AAGCACATGAGTCTTTACCTGTGCTGAAGTTGTATGGACCTACATACACACAAATGAATGCATGTAAAATCTGGTGATAC
1841 TGAATAAAGTCTGTGGTCTAGATAGCAGTAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cauuUCACUGUCUC----AUAUCUGu 5'
              | ||| ||||    ||||||: 
Target 5' tttcACTGA-AGAGGATCTATAGATg 3'
 1003 - 1027 139.00 -7.10
2 
miRNA  3' cauuucACUGUCUCAUAUCUGu 5'
                ||| :  ||||:||| 
Target 5' ctgtgcTGAAGTTGTATGGACc 3'
 1779 - 1800 136.00 -9.80
3 
miRNA  3' caUUUCACUG-UCUCAUAUCUgu 5'
            :|:||||| | | ||| ||  
Target 5' ttGAGGTGACAAAATTATTGAaa 3'
 1579 - 1601 116.00 -9.60
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs782162628 3 dbSNP
rs1348958542 8 dbSNP
rs782238525 19 dbSNP
rs782678159 25 dbSNP
rs1415977764 31 dbSNP
rs1357888010 40 dbSNP
rs782236474 45 dbSNP
rs902134368 49 dbSNP
rs1465071986 50 dbSNP
rs1345421479 51 dbSNP
rs1160767620 61 dbSNP
rs997772269 69 dbSNP
rs1455305163 80 dbSNP
rs1411045889 98 dbSNP
rs1188353175 114 dbSNP
rs1042813731 118 dbSNP
rs1476175466 143 dbSNP
rs1255260507 168 dbSNP
rs1180227021 172 dbSNP
rs1482930777 173 dbSNP
rs1261545762 175 dbSNP
rs902504478 176 dbSNP
rs1327296264 202 dbSNP
rs1267942927 226 dbSNP
rs782393521 229 dbSNP
rs1234228517 231 dbSNP
rs188616670 241 dbSNP
rs1337619388 250 dbSNP
rs1311120455 259 dbSNP
rs1394959497 263 dbSNP
rs193145745 263 dbSNP
rs1362112383 264 dbSNP
rs782063131 279 dbSNP
rs1290112093 286 dbSNP
rs782724952 291 dbSNP
rs782233740 295 dbSNP
rs376822069 307 dbSNP
rs1387426825 311 dbSNP
rs1032360538 317 dbSNP
rs1165394737 337 dbSNP
rs1462756734 341 dbSNP
rs1366676069 363 dbSNP
rs1163925176 364 dbSNP
rs781839741 381 dbSNP
rs1262559897 388 dbSNP
rs1190584635 423 dbSNP
rs1463726732 434 dbSNP
rs1247576505 440 dbSNP
rs1214744546 441 dbSNP
rs1470069440 447 dbSNP
rs1264027265 461 dbSNP
rs781941036 463 dbSNP
rs1244751707 474 dbSNP
rs1308595368 475 dbSNP
rs1297172262 476 dbSNP
rs782499991 477 dbSNP
rs1022787740 480 dbSNP
rs971749236 493 dbSNP
rs782650782 509 dbSNP
rs981363130 511 dbSNP
rs1026001612 512 dbSNP
rs950333555 517 dbSNP
rs1292696685 531 dbSNP
rs1462489422 535 dbSNP
rs984545999 542 dbSNP
rs782154918 555 dbSNP
rs781883701 556 dbSNP
rs1374670740 560 dbSNP
rs943098792 562 dbSNP
rs975353245 566 dbSNP
rs1389811152 572 dbSNP
rs782428482 596 dbSNP
rs4898413 605 dbSNP
rs1265793116 608 dbSNP
rs1209602762 612 dbSNP
rs933591359 613 dbSNP
rs1253527122 626 dbSNP
rs1202445855 629 dbSNP
rs1340780503 641 dbSNP
rs1042621661 651 dbSNP
rs1236088016 665 dbSNP
rs1328988673 678 dbSNP
rs902537025 694 dbSNP
rs1391694560 701 dbSNP
rs1398589697 705 dbSNP
rs1306057422 710 dbSNP
rs1429005311 716 dbSNP
rs782134321 737 dbSNP
rs1370075408 744 dbSNP
rs782752961 754 dbSNP
rs1479162085 770 dbSNP
rs1376076000 773 dbSNP
rs936642036 784 dbSNP
rs1420006627 808 dbSNP
rs1254621138 817 dbSNP
rs1180706564 849 dbSNP
rs1482995694 866 dbSNP
rs183861008 868 dbSNP
rs1201619476 872 dbSNP
rs1342446308 884 dbSNP
rs1255015633 888 dbSNP
rs1053710977 905 dbSNP
rs895267248 912 dbSNP
rs35051167 922 dbSNP
rs782576728 936 dbSNP
rs187658522 940 dbSNP
rs1286195159 945 dbSNP
rs1409207316 994 dbSNP
rs191327302 1004 dbSNP
rs368800547 1007 dbSNP
rs1416176950 1009 dbSNP
rs782640398 1012 dbSNP
rs782502155 1030 dbSNP
rs782641813 1034 dbSNP
rs1400371823 1035 dbSNP
rs1172160909 1041 dbSNP
rs1454480583 1067 dbSNP
rs1414700648 1071 dbSNP
rs1157385984 1078 dbSNP
rs1026200355 1082 dbSNP
rs1258754678 1089 dbSNP
rs1189060084 1096 dbSNP
rs782269197 1108 dbSNP
rs183710691 1129 dbSNP
rs950364218 1141 dbSNP
rs1330770339 1143 dbSNP
rs984496937 1147 dbSNP
rs1015931430 1148 dbSNP
rs964849286 1155 dbSNP
rs782480671 1157 dbSNP
rs1335399132 1171 dbSNP
rs782582073 1180 dbSNP
rs782414235 1189 dbSNP
rs974501952 1192 dbSNP
rs143227786 1201 dbSNP
rs1338825669 1210 dbSNP
rs933475803 1220 dbSNP
rs1333552520 1224 dbSNP
rs1391086034 1225 dbSNP
rs1157412033 1228 dbSNP
rs188820132 1239 dbSNP
rs1419240163 1248 dbSNP
rs1165561540 1259 dbSNP
rs1472079345 1261 dbSNP
rs1367455323 1262 dbSNP
rs1193259763 1263 dbSNP
rs924156526 1288 dbSNP
rs1465986727 1289 dbSNP
rs1245748875 1293 dbSNP
rs1207911578 1302 dbSNP
rs1468712044 1307 dbSNP
rs1291731225 1320 dbSNP
rs1226574391 1337 dbSNP
rs782039668 1346 dbSNP
rs1283726680 1348 dbSNP
rs1053742055 1357 dbSNP
rs1229155968 1358 dbSNP
rs1367664740 1359 dbSNP
rs1318733401 1363 dbSNP
rs1434622269 1364 dbSNP
rs1395729665 1366 dbSNP
rs895131859 1373 dbSNP
rs1404158677 1382 dbSNP
rs191753720 1393 dbSNP
rs1046445311 1396 dbSNP
rs1167998975 1403 dbSNP
rs782688360 1414 dbSNP
rs1002669561 1432 dbSNP
rs1026151257 1442 dbSNP
rs781946648 1446 dbSNP
rs1387961192 1463 dbSNP
rs1187590354 1466 dbSNP
rs1454421976 1472 dbSNP
rs1248307849 1494 dbSNP
rs1219090881 1499 dbSNP
rs1006132494 1514 dbSNP
rs1273538604 1519 dbSNP
rs1205990280 1532 dbSNP
rs782253850 1536 dbSNP
rs1295459578 1559 dbSNP
rs1228030310 1564 dbSNP
rs1368560228 1589 dbSNP
rs185361068 1594 dbSNP
rs781958530 1598 dbSNP
rs1434681874 1630 dbSNP
rs1309116730 1633 dbSNP
rs1349840623 1633 dbSNP
rs1432144127 1641 dbSNP
rs1368207640 1645 dbSNP
rs996342317 1646 dbSNP
rs1030048987 1649 dbSNP
rs1435010223 1656 dbSNP
rs782096185 1659 dbSNP
rs1189250264 1677 dbSNP
rs1477548484 1687 dbSNP
rs1233225758 1688 dbSNP
rs1184310693 1699 dbSNP
rs955049268 1706 dbSNP
rs145567043 1708 dbSNP
rs1204454519 1745 dbSNP
rs924097517 1765 dbSNP
rs782316058 1771 dbSNP
rs782012982 1772 dbSNP
rs989667807 1780 dbSNP
rs782761552 1783 dbSNP
rs1367404206 1784 dbSNP
rs1289341214 1790 dbSNP
rs1412298354 1791 dbSNP
rs1349158208 1796 dbSNP
rs1306883801 1808 dbSNP
rs1448033073 1811 dbSNP
rs1360566857 1815 dbSNP
rs1173583964 1821 dbSNP
rs916579281 1822 dbSNP
rs1408531254 1829 dbSNP
rs948043608 1838 dbSNP
rs1161090151 1840 dbSNP
rs1471578245 1846 dbSNP
rs782163651 1903 dbSNP
rs928107808 1908 dbSNP
rs781997422 1918 dbSNP
rs1483590441 1919 dbSNP
rs930044966 1938 dbSNP
rs190056081 1946 dbSNP
rs1047625501 1951 dbSNP
rs1311821987 1968 dbSNP
rs1269222279 1976 dbSNP
rs1397102362 1977 dbSNP
rs781874414 1977 dbSNP
rs782761603 1977 dbSNP
rs1380768030 1985 dbSNP
rs782489213 1985 dbSNP
rs1300566286 1986 dbSNP
rs1446915801 1987 dbSNP
rs1388845198 1990 dbSNP
rs1322307058 1991 dbSNP
rs1411179883 1998 dbSNP
rs1165456490 2011 dbSNP
rs1425455100 2021 dbSNP
rs1416134199 2024 dbSNP
rs782761266 2029 dbSNP
rs1483054044 2035 dbSNP
rs781791876 2037 dbSNP
rs1248805322 2039 dbSNP
rs1211001342 2057 dbSNP
rs1463784713 2115 dbSNP
rs1267864889 2129 dbSNP
rs1246260209 2149 dbSNP
rs1324019081 2150 dbSNP
rs782467463 2158 dbSNP
rs1227183447 2160 dbSNP
rs1365515368 2164 dbSNP
rs1299296916 2171 dbSNP
rs782598038 2181 dbSNP
rs1432414731 2201 dbSNP
rs1387682838 2229 dbSNP
rs886257991 2230 dbSNP
rs1459432649 2246 dbSNP
rs1347985905 2247 dbSNP
rs199862585 2263 dbSNP
rs1162772138 2266 dbSNP
rs1006163618 2281 dbSNP
rs1037595221 2297 dbSNP
rs1444042366 2313 dbSNP
rs900174755 2332 dbSNP
rs1190798137 2339 dbSNP
rs782149735 2354 dbSNP
rs782485135 2356 dbSNP
rs1030408657 2360 dbSNP
rs954513583 2363 dbSNP
rs999212306 2364 dbSNP
rs1031147580 2367 dbSNP
rs1210754395 2386 dbSNP
rs1489757291 2387 dbSNP
rs1264163476 2396 dbSNP
rs1220218187 2398 dbSNP
rs1342319117 2400 dbSNP
rs782662250 2401 dbSNP
rs782802797 2407 dbSNP
rs1225806034 2416 dbSNP
rs1363993835 2427 dbSNP
rs1301732953 2433 dbSNP
rs1388224068 2446 dbSNP
rs1365439298 2453 dbSNP
rs989697304 2461 dbSNP
rs1292819380 2462 dbSNP
rs781909698 2471 dbSNP
rs182162851 2472 dbSNP
rs970040188 2495 dbSNP
rs982170309 2506 dbSNP
rs1372654366 2524 dbSNP
rs1200063371 2561 dbSNP
rs1435231018 2568 dbSNP
rs1265681564 2569 dbSNP
rs1199378053 2575 dbSNP
rs1202334678 2575 dbSNP
rs1341019928 2575 dbSNP
rs1483664428 2575 dbSNP
rs1256178493 2576 dbSNP
rs187240918 2579 dbSNP
rs1310267398 2598 dbSNP
rs1300331167 2608 dbSNP
rs1410421125 2613 dbSNP
rs1352198417 2616 dbSNP
rs781804754 2617 dbSNP
rs1047157034 2629 dbSNP
rs1309945915 2663 dbSNP
rs1408034454 2680 dbSNP
rs1396069590 2684 dbSNP
rs907722804 2689 dbSNP
rs782465306 2692 dbSNP
rs1038027138 2698 dbSNP
rs1176141863 2713 dbSNP
rs1473212639 2717 dbSNP
rs900457121 2725 dbSNP
rs996482621 2727 dbSNP
rs1051461473 2731 dbSNP
rs1436669761 2737 dbSNP
rs1256213381 2757 dbSNP
rs890094058 2784 dbSNP
rs999243534 2785 dbSNP
rs1228714510 2799 dbSNP
rs782223719 2808 dbSNP
rs1286328569 2811 dbSNP
rs782424927 2820 dbSNP
rs113320796 2822 dbSNP
rs10194 2826 dbSNP
rs1335290777 2829 dbSNP
rs1334917472 2830 dbSNP
rs1398065204 2840 dbSNP
rs1011068326 2849 dbSNP
rs1336489701 2853 dbSNP
rs1458054920 2854 dbSNP
rs1414861117 2857 dbSNP
rs1157647071 2860 dbSNP
rs188240545 2861 dbSNP
rs1368603293 2862 dbSNP
rs1188955452 2866 dbSNP
rs969697438 2879 dbSNP
rs1242103337 2880 dbSNP
rs1209145598 2897 dbSNP
rs1466126513 2904 dbSNP
rs1374960 2910 dbSNP
rs1204556818 2912 dbSNP
rs1356946189 2913 dbSNP
rs1035048859 2917 dbSNP
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
29 hsa-miR-4796-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT446014 VNN1 vanin 1 2 2
MIRT493828 FRS2 fibroblast growth factor receptor substrate 2 2 6
MIRT506324 ONECUT2 one cut homeobox 2 2 2
MIRT515488 PRKCD protein kinase C delta 2 4
MIRT515543 KRT222 keratin 222 2 4
MIRT518502 DEPTOR DEP domain containing MTOR interacting protein 2 6
MIRT519278 DDX55 DEAD-box helicase 55 2 2
MIRT528638 SENP6 SUMO1/sentrin specific peptidase 6 2 2
MIRT532130 NOL11 nucleolar protein 11 2 2
MIRT558240 EDA2R ectodysplasin A2 receptor 2 2
MIRT562293 GLO1 glyoxalase I 2 2
MIRT575346 Cacul1 CDK2 associated, cullin domain 1 2 2
MIRT610250 SLC35B4 solute carrier family 35 member B4 2 2
MIRT616752 SVOP SV2 related protein 2 2
MIRT627810 PTCHD1 patched domain containing 1 2 4
MIRT643062 CCDC149 coiled-coil domain containing 149 2 2
MIRT652031 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT658708 EMB embigin 2 2
MIRT687624 LRRC40 leucine rich repeat containing 40 2 2
MIRT692723 INPP5B inositol polyphosphate-5-phosphatase B 2 2
MIRT697508 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT702301 LAMP3 lysosomal associated membrane protein 3 2 2
MIRT718288 MINA ribosomal oxygenase 2 2 2
MIRT755767 BRCC3 BRCA1/BRCA2-containing complex subunit 3 5 1
MIRT755769 BARD1 BRCA1 associated RING domain 1 5 1
MIRT755770 ATM ATM serine/threonine kinase 5 1
MIRT755771 PARP14 poly(ADP-ribose) polymerase family member 14 5 1
MIRT755775 PARP2 poly(ADP-ribose) polymerase 2 5 1
MIRT755777 PARP11 poly(ADP-ribose) polymerase family member 11 5 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4796-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4796-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4796-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)

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