miRTarBase - #MIRT755771


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pre-miRNA Information
pre-miRNA hsa-mir-4796   
Genomic Coordinates chr3: 114743445 - 114743525
Description Homo sapiens miR-4796 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4796-5p
Sequence 9| UGUCUAUACUCUGUCACUUUAC |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1466952984 15 dbSNP
rs887451291 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PARP14   
Synonyms ARTD8, BAL2, PARP-14, pART8
Description poly(ADP-ribose) polymerase family member 14
Transcript NM_017554   
Expression
Putative miRNA Targets on PARP14
3'UTR of PARP14
(miRNA target sites are highlighted)		 
>PARP14|NM_017554|3'UTR
   1 CACTTTGGTATCCTTCCCACAAAATTATTCTCCATTTGTACATATCTAGTTGTAAAACAAGTTTTAGCTTTTTTTTTTAA
  81 TTCCTCTTAACAGATTTTTCTAATATCCAAGGATCATTCTTTGTCGCTGAAGTCAGTCTTTCTTCAGCTTCTCTTTCATA
 161 ATGGAAATGAACTTATTATCTTGAGAGCAAATAACTTGGAAAATTTAAATGAGATAATGCAGTTGCAACTGTGTGTCCAC
 241 AAGTATGGACATCAAATCTGTGGGAAAAGAACAGGTTTGTATTTTCAGGAAGGAGAGAATAACAGTCTTATAGACAGAGG
 321 GCACAGCTAAGCACAGCTGCCACTGCAGGAGACAGGCCCCATGTCAGGATGCCATAGTGCTGTGGGGAGCACAGTATTAC
 401 CCAGTGGGTAGGGCTTCTGTCTTCCCTGGGAGCAGGGATGGTATCTTAGTCAATTTTTTTCCCTTGAGATGAGGTCTGTG
 481 CCTGATGTACAACGGATACTCCATAAATGTTTGACAAACCAACGAAGAATGAAAAAAAGCCTAGTCAGACTCCCATCCAA
 561 AGTAGGAACTATCTCTTTAACATTCTTGACTCACTATCACTTTACCTCAAATTGAACAGATTCCATGACGGAACTTCATT
 641 CTTCACAAACTAGCCAGTGACATGTGGGACAGCTCTGGCCAGGGCTCTGGGACTGCAGTGTACTTGCGCTCTGCACGGTC
 721 CAGGAGCTGTGATGTGGCTGTGGTCTAGGGGAATCCTGCCTGCCCCATGGAGTTGCGCAGCACAACCCTGGCTCCAATTG
 801 CCAGAAGGCTCTTTTTAATGCTGAACCAAAATGTGCCTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTGCCC
 881 AGGCTGGAGTGCAATGGCGCGATCTCAGCTCACTGCAGCCACTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTC
 961 CCGAGTAGCTGGGATTACAGGCATGCGCTAACACACCCAGCTAATTTTGTATTTTTAGTAGAGACGAGGTTTCTCCATGT
1041 TCGACAGGCTGGTCTCGAACTCCCACCTCAGCCTCCCAAACTGCTGGGATTACAGGTGTGAGCCACCGTGACCAGCCAAT
1121 GTGCCTTCTTATAGTGTCTACTCATTGGTCTTTGTTCTGCCCAGTGATAACAATGGGATAACGCCTGCTACACATCTTCA
1201 TTGTGAAACCCTTCCCCTGTGCTGAGATTAAATGAACTCTAAGATTATTAAATAGTATATTTTCCTTGACAGCCTAGCGT
1281 TTGATGATTTTAAAGCCTTATGTATAAATAAACCAAAGGAAGTAAGCAGTCATATTGCTAATTTGCTAACTCCTATCTAT
1361 TGAATGGTGAAGTTTTAAAAATTTCCCCAGGTAAGTTTAAGATTCAAACACCATCTATTGAGCACCTACATTGTGTGCCA
1441 GGTAGTAAAATAGGTGCTTTCATACACATTGTCTCAATTCCTGTGAGGTCAGAATTATCTCTGCATTTGAAACTTGAGGA
1521 AACATGCTCAGAGTGCAAGAAGCTTCCTTGCCTGAGATCACCTAGAAAGGAACCCTCAGAGCCGGCAACTGAATCTTGGT
1601 CCCTGTGATGTCAAGCCCATTGCTCTCCCACTGCAGAACATGGCCTCTAGATTAATGCCACCGATTCAGGAACACCTCCG
1681 ACAGTCTTGAAATACCCCCATGTTGCCTTGTTTGTTTTTTCCTTCTGGCTTCTTCTATTACAGTCTCTTCATTGGAAGCT
1761 CTGTAGGCCAAGGCCAGAGCTGATACTGACACGGAGCCAATGCAGATAGCACATCAGATGCTAGGGGTCGCTGGGAGGAT
1841 TAAGGGACTTAATCTGCTAGGAACACCTGTACTTGAAGTGGAGGAGGCTAGGGGGCCACAGTTGCTGCTTCATTAACATA
1921 GAGGTTTTGGATTTTTTTCTCTTGTGGTTTGTTTTTTAAGTGGATTGGCAGACTCCTTGTTGCTTAAGAGTGGCTTTCTA
2001 GGCAGGCCACTGGCATCTGAATTCATCATTGACAATAAATGTAAGAAATTGGAATAAAAAAGAGAGACCTGCTGTTATTC
2081 GCTTTTGTTCTCCAGTGATTTGATTAACTCAGGGCAAGGCTGAATATCAGAGTGTATCGCACTGAAGAATAATAATCCAT
2161 TCAGTAATGTTATAGTTATCCTCAATCTAAATATGTCAACTGTCATTTTGCTACTTTTCAAATAAAATACTTGAAAACTG
2241 TCAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' caUUUCACUGUC-UCAUAUCUGu 5'
            |:| | ||||   ||||||| 
Target 5' agAGAATAACAGTCTTATAGACa 3'
 294 - 316 156.00 -11.90
2 
miRNA  3' cauuuCAC---UGUCUCAUAUCUGu 5'
               |||   ||| |||||:||| 
Target 5' actgtGTGTCCACA-AGTATGGACa 3'
 228 - 251 144.00 -13.70
3 
miRNA  3' cauuucacugucUCAUAUCUGu 5'
                      |||| |||| 
Target 5' ttttgtatttttAGTAGAGACg 3'
 1005 - 1026 118.00 -7.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30126795 23 COSMIC
COSN30504612 36 COSMIC
COSN31593807 62 COSMIC
COSN27419423 79 COSMIC
COSN30670412 85 COSMIC
COSN30102066 126 COSMIC
COSN8869439 131 COSMIC
COSN30120594 170 COSMIC
COSN7815092 204 COSMIC
COSN30526559 222 COSMIC
COSN16150143 245 COSMIC
COSN22021849 784 COSMIC
COSN16057076 1230 COSMIC
COSN16895964 1244 COSMIC
COSN21551860 1287 COSMIC
COSN17181755 1389 COSMIC
COSN14775177 1471 COSMIC
COSN28198346 1574 COSMIC
COSN31487731 2046 COSMIC
COSN21779559 2123 COSMIC
COSN31487588 2145 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs779237340 2 dbSNP
rs747855716 3 dbSNP
rs1207431575 4 dbSNP
rs771922187 9 dbSNP
rs367895347 11 dbSNP
rs1169234899 13 dbSNP
rs1352547367 18 dbSNP
rs1048053609 19 dbSNP
rs1325315814 21 dbSNP
rs760689677 26 dbSNP
rs199862067 28 dbSNP
rs771058275 33 dbSNP
rs768211546 62 dbSNP
rs1057007399 69 dbSNP
rs1288378408 69 dbSNP
rs1380491737 69 dbSNP
rs1466737716 78 dbSNP
rs77768941 79 dbSNP
rs776611663 80 dbSNP
rs762238883 87 dbSNP
rs1480284594 89 dbSNP
rs1340614109 92 dbSNP
rs1424822383 102 dbSNP
rs1195867205 108 dbSNP
rs530387159 117 dbSNP
rs1203898896 126 dbSNP
rs1041627994 127 dbSNP
rs902551339 130 dbSNP
rs3732832 131 dbSNP
rs1222550958 136 dbSNP
rs563023468 136 dbSNP
rs1236490760 149 dbSNP
rs7648262 153 dbSNP
rs73856281 158 dbSNP
rs1044362489 159 dbSNP
rs144296124 169 dbSNP
rs186733108 173 dbSNP
rs1287730218 176 dbSNP
rs1388320929 181 dbSNP
rs1334918726 184 dbSNP
rs1469485064 186 dbSNP
rs1020223482 189 dbSNP
rs965568654 192 dbSNP
rs1373048596 208 dbSNP
rs74504492 211 dbSNP
rs74999964 212 dbSNP
rs973435733 221 dbSNP
rs907235737 230 dbSNP
rs1240764027 232 dbSNP
rs3732831 246 dbSNP
rs1403004571 249 dbSNP
rs1274843272 252 dbSNP
rs1193932113 264 dbSNP
rs1397819133 265 dbSNP
rs866613234 296 dbSNP
rs748576050 297 dbSNP
rs530064474 300 dbSNP
rs1436325127 301 dbSNP
rs770166563 305 dbSNP
rs1313024492 307 dbSNP
rs1452170207 312 dbSNP
rs1336644744 320 dbSNP
rs1331256122 324 dbSNP
rs1408619679 339 dbSNP
rs1396254646 340 dbSNP
rs539501980 354 dbSNP
rs546800923 355 dbSNP
rs1382791083 357 dbSNP
rs1182510776 358 dbSNP
rs1363715081 361 dbSNP
rs937096905 364 dbSNP
rs1234299151 365 dbSNP
rs1179370795 372 dbSNP
rs1016881227 377 dbSNP
rs1290331885 378 dbSNP
rs1224550555 387 dbSNP
rs1257062201 391 dbSNP
rs1289674387 398 dbSNP
rs1346538696 405 dbSNP
rs964483862 408 dbSNP
rs974517709 413 dbSNP
rs372893434 420 dbSNP
rs923036202 437 dbSNP
rs566699707 442 dbSNP
rs538858165 443 dbSNP
rs1041901717 444 dbSNP
rs923844028 445 dbSNP
rs765569883 448 dbSNP
rs936623743 454 dbSNP
rs1400836480 463 dbSNP
rs11557048 468 dbSNP
rs1156410961 470 dbSNP
rs1379247558 474 dbSNP
rs16833473 483 dbSNP
rs1269312099 484 dbSNP
rs948813986 490 dbSNP
rs1044434980 494 dbSNP
rs116440412 495 dbSNP
rs182937725 496 dbSNP
rs994356975 504 dbSNP
rs1047723694 505 dbSNP
rs886689399 519 dbSNP
rs77891141 524 dbSNP
rs1434766472 525 dbSNP
rs1302650979 528 dbSNP
rs1333307962 532 dbSNP
rs1016417980 536 dbSNP
rs143778391 539 dbSNP
rs1344154881 557 dbSNP
rs1303025672 561 dbSNP
rs996361573 564 dbSNP
rs1432153114 583 dbSNP
rs1346394254 588 dbSNP
rs1315677403 589 dbSNP
rs1030053151 590 dbSNP
rs1273720095 606 dbSNP
rs1429600815 607 dbSNP
rs1329172796 611 dbSNP
rs1210218200 624 dbSNP
rs954449169 630 dbSNP
rs112392513 631 dbSNP
rs977752512 638 dbSNP
rs1464290546 651 dbSNP
rs1186965482 652 dbSNP
rs1031119217 655 dbSNP
rs957969611 657 dbSNP
rs1213816444 664 dbSNP
rs1210189756 666 dbSNP
rs1264045919 671 dbSNP
rs759600529 686 dbSNP
rs989828575 700 dbSNP
rs767688968 701 dbSNP
rs146858282 709 dbSNP
rs947860810 710 dbSNP
rs1364779429 713 dbSNP
rs981917623 717 dbSNP
rs140712676 718 dbSNP
rs1338247032 719 dbSNP
rs938805811 723 dbSNP
rs945752274 725 dbSNP
rs1472937880 728 dbSNP
rs113339767 732 dbSNP
rs886466360 734 dbSNP
rs1417346399 735 dbSNP
rs75650441 742 dbSNP
rs925752010 747 dbSNP
rs1448893598 748 dbSNP
rs1243860087 752 dbSNP
rs942277461 759 dbSNP
rs10934615 760 dbSNP
rs1205704752 763 dbSNP
rs1309753894 763 dbSNP
rs911263563 768 dbSNP
rs576010074 769 dbSNP
rs1385607640 772 dbSNP
rs996309187 773 dbSNP
rs1323403132 777 dbSNP
rs531837284 778 dbSNP
rs1350603447 779 dbSNP
rs1381679224 786 dbSNP
rs1229646358 789 dbSNP
rs1030545591 791 dbSNP
rs35141145 795 dbSNP
rs1352570804 798 dbSNP
rs999305210 800 dbSNP
rs1425232112 802 dbSNP
rs77946162 804 dbSNP
rs187136725 807 dbSNP
rs1442970116 811 dbSNP
rs1255794417 829 dbSNP
rs1487348170 835 dbSNP
rs1209168978 837 dbSNP
rs1293315700 838 dbSNP
rs1307208762 838 dbSNP
rs1392807170 838 dbSNP
rs1481799368 838 dbSNP
rs35035581 838 dbSNP
rs397874403 838 dbSNP
rs752458177 838 dbSNP
rs758631008 838 dbSNP
rs1047249981 853 dbSNP
rs1297411291 855 dbSNP
rs973856943 856 dbSNP
rs1184405260 857 dbSNP
rs1410125810 860 dbSNP
rs1165521119 861 dbSNP
rs1422765245 864 dbSNP
rs1418707606 868 dbSNP
rs1367998537 871 dbSNP
rs1165676863 873 dbSNP
rs915693191 875 dbSNP
rs1005840919 897 dbSNP
rs1370569854 899 dbSNP
rs546887108 900 dbSNP
rs140723766 901 dbSNP
rs577986751 902 dbSNP
rs1220933630 943 dbSNP
rs1487852361 948 dbSNP
rs1371687059 957 dbSNP
rs150106874 964 dbSNP
rs1314827538 966 dbSNP
rs1287451580 975 dbSNP
rs981907561 977 dbSNP
rs927833938 982 dbSNP
rs750624914 987 dbSNP
rs369282591 988 dbSNP
rs1386143829 1002 dbSNP
rs960098884 1008 dbSNP
rs1390032912 1010 dbSNP
rs1183864992 1015 dbSNP
rs967171284 1021 dbSNP
rs1343695984 1022 dbSNP
rs11557047 1026 dbSNP
rs1480941135 1027 dbSNP
rs568853441 1029 dbSNP
rs1431948107 1037 dbSNP
rs907969178 1043 dbSNP
rs758580143 1044 dbSNP
rs1037711691 1048 dbSNP
rs537984641 1049 dbSNP
rs922179562 1057 dbSNP
rs182099155 1058 dbSNP
rs1203935470 1061 dbSNP
rs1051921330 1065 dbSNP
rs890652372 1076 dbSNP
rs944598728 1096 dbSNP
rs1041070935 1097 dbSNP
rs1232424927 1099 dbSNP
rs567747624 1103 dbSNP
rs9872606 1108 dbSNP
rs893562908 1109 dbSNP
rs1182696203 1110 dbSNP
rs1258468988 1116 dbSNP
rs147791717 1121 dbSNP
rs1320095755 1125 dbSNP
rs1470430263 1130 dbSNP
rs1408687536 1136 dbSNP
rs1005725510 1145 dbSNP
rs186691881 1151 dbSNP
rs1465978563 1159 dbSNP
rs1374194024 1167 dbSNP
rs1195976905 1168 dbSNP
rs1163302270 1175 dbSNP
rs1010949477 1183 dbSNP
rs1246884983 1184 dbSNP
rs1432150972 1187 dbSNP
rs1462421873 1188 dbSNP
rs193010427 1201 dbSNP
rs1353416409 1205 dbSNP
rs1199703058 1210 dbSNP
rs1014895473 1211 dbSNP
rs969267052 1212 dbSNP
rs1304280434 1217 dbSNP
rs1376483755 1219 dbSNP
rs1003441165 1224 dbSNP
rs1363043643 1224 dbSNP
rs185878241 1227 dbSNP
rs967432438 1230 dbSNP
rs372755525 1236 dbSNP
rs1453645439 1238 dbSNP
rs1298050042 1251 dbSNP
rs998647526 1259 dbSNP
rs1367022262 1260 dbSNP
rs1226092831 1261 dbSNP
rs1032727929 1266 dbSNP
rs556764572 1271 dbSNP
rs754460971 1273 dbSNP
rs781775391 1274 dbSNP
rs985942325 1275 dbSNP
rs1017368425 1279 dbSNP
rs115565417 1280 dbSNP
rs1446049186 1285 dbSNP
rs1482396720 1287 dbSNP
rs976391515 1295 dbSNP
rs1438148082 1296 dbSNP
rs907914092 1302 dbSNP
rs1252413536 1315 dbSNP
rs1193947636 1316 dbSNP
rs1249046168 1320 dbSNP
rs963535702 1326 dbSNP
rs1451643692 1330 dbSNP
rs1187258740 1333 dbSNP
rs1246860726 1334 dbSNP
rs1419401596 1353 dbSNP
rs973805791 1356 dbSNP
rs1433308857 1358 dbSNP
rs1361703562 1366 dbSNP
rs141263150 1367 dbSNP
rs1357131113 1369 dbSNP
rs146980616 1373 dbSNP
rs1331361387 1381 dbSNP
rs1408530168 1383 dbSNP
rs188342073 1384 dbSNP
rs1390603541 1389 dbSNP
rs528239718 1391 dbSNP
rs1425954180 1392 dbSNP
rs935462485 1393 dbSNP
rs1052618563 1408 dbSNP
rs1162211439 1410 dbSNP
rs1470318090 1417 dbSNP
rs1365314953 1418 dbSNP
rs893544252 1419 dbSNP
rs541446694 1422 dbSNP
rs941396468 1432 dbSNP
rs1269572823 1436 dbSNP
rs1224667751 1446 dbSNP
rs138154513 1448 dbSNP
rs532492798 1452 dbSNP
rs1368173349 1463 dbSNP
rs6774933 1471 dbSNP
rs1287828153 1472 dbSNP
rs562735311 1484 dbSNP
rs1227945438 1486 dbSNP
rs894627514 1488 dbSNP
rs1281606086 1489 dbSNP
rs1226996448 1498 dbSNP
rs904889006 1517 dbSNP
rs1203272359 1519 dbSNP
rs1407305292 1520 dbSNP
rs1347555333 1524 dbSNP
rs950356482 1534 dbSNP
rs1268955609 1535 dbSNP
rs1046395298 1552 dbSNP
rs149523496 1560 dbSNP
rs1472116752 1570 dbSNP
rs1034870496 1584 dbSNP
rs887030865 1585 dbSNP
rs1477031819 1589 dbSNP
rs193182532 1592 dbSNP
rs1032612302 1612 dbSNP
rs1193370515 1613 dbSNP
rs1422455005 1614 dbSNP
rs1479803185 1615 dbSNP
rs1447775608 1616 dbSNP
rs1159476976 1621 dbSNP
rs1286547312 1623 dbSNP
rs1016804005 1631 dbSNP
rs567833778 1632 dbSNP
rs1328837130 1638 dbSNP
rs973536695 1642 dbSNP
rs1007247426 1649 dbSNP
rs1225877234 1658 dbSNP
rs533508279 1663 dbSNP
rs1455478021 1669 dbSNP
rs1317364473 1670 dbSNP
rs550633245 1681 dbSNP
rs546992827 1686 dbSNP
rs17212030 1688 dbSNP
rs1026651908 1691 dbSNP
rs950628680 1696 dbSNP
rs1406522585 1697 dbSNP
rs982793749 1708 dbSNP
rs531935437 1729 dbSNP
rs746561734 1732 dbSNP
rs540167056 1746 dbSNP
rs1222927886 1749 dbSNP
rs1475760339 1751 dbSNP
rs1249986397 1753 dbSNP
rs941448418 1754 dbSNP
rs1464663241 1764 dbSNP
rs935635173 1765 dbSNP
rs1331479771 1766 dbSNP
rs916112695 1771 dbSNP
rs556465866 1773 dbSNP
rs950259944 1784 dbSNP
rs988706964 1785 dbSNP
rs1215667049 1793 dbSNP
rs915438655 1794 dbSNP
rs1294838365 1797 dbSNP
rs1433896146 1798 dbSNP
rs903449176 1802 dbSNP
rs1338428843 1808 dbSNP
rs1445477419 1815 dbSNP
rs576550525 1819 dbSNP
rs1358394557 1830 dbSNP
rs934892499 1831 dbSNP
rs1452489092 1847 dbSNP
rs1411604668 1849 dbSNP
rs1392088703 1857 dbSNP
rs1166867346 1869 dbSNP
rs1054074033 1870 dbSNP
rs946438643 1885 dbSNP
rs1044768098 1886 dbSNP
rs1183843763 1890 dbSNP
rs1267327577 1890 dbSNP
rs1237275713 1891 dbSNP
rs1490058450 1892 dbSNP
rs1205815773 1895 dbSNP
rs904963887 1903 dbSNP
rs373869764 1904 dbSNP
rs1271818577 1912 dbSNP
rs370020431 1913 dbSNP
rs1182227563 1914 dbSNP
rs867745024 1916 dbSNP
rs1359559695 1920 dbSNP
rs938983362 1942 dbSNP
rs769671426 1943 dbSNP
rs887019374 1946 dbSNP
rs1298583965 1947 dbSNP
rs1378102028 1947 dbSNP
rs1444254678 1952 dbSNP
rs1157568058 1962 dbSNP
rs535685547 1973 dbSNP
rs1017161744 1999 dbSNP
rs1385942518 2012 dbSNP
rs532809791 2023 dbSNP
rs143191523 2026 dbSNP
rs1413490450 2030 dbSNP
rs114404480 2034 dbSNP
rs1484315985 2037 dbSNP
rs953444373 2049 dbSNP
rs1006122728 2050 dbSNP
rs1490359116 2052 dbSNP
rs1266721243 2057 dbSNP
rs541430662 2058 dbSNP
rs1218898305 2059 dbSNP
rs1308702584 2067 dbSNP
rs1307432377 2074 dbSNP
rs564511660 2075 dbSNP
rs577045596 2079 dbSNP
rs866779090 2081 dbSNP
rs546637251 2082 dbSNP
rs3832230 2097 dbSNP
rs766633885 2100 dbSNP
rs1330978557 2101 dbSNP
rs1456582265 2107 dbSNP
rs1349578275 2108 dbSNP
rs1230369112 2111 dbSNP
rs915494737 2121 dbSNP
rs1410256087 2132 dbSNP
rs971478894 2136 dbSNP
rs1235494654 2138 dbSNP
rs1359340325 2139 dbSNP
rs184617612 2140 dbSNP
rs1268800718 2148 dbSNP
rs924788205 2150 dbSNP
rs1487945139 2174 dbSNP
rs980912100 2177 dbSNP
rs188539514 2179 dbSNP
rs1210211326 2194 dbSNP
rs1326762568 2195 dbSNP
rs1435496068 2197 dbSNP
rs6726 2214 dbSNP
rs536009215 2223 dbSNP
rs1054627559 2227 dbSNP
rs1303486738 2228 dbSNP
rs1056045928 2229 dbSNP
rs1385096653 2231 dbSNP
rs1473682429 2240 dbSNP
rs1367004558 2244 dbSNP
CLIP-seq Support 1 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_017554 | 3UTR | AAAGAACAGGUUUGUAUUUUCAGGAAGGAGAGAAUAACAGUCUUAUAGACAGAGGGCACAGCUAAGCACAGCUGCCACUGCAGGAGACAGGCCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_017554 | 3UTR | GACAGAGGGCACAGCUAAGCACAGCUGCCACUGCAGGAGACAGGCCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
29 hsa-miR-4796-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT446014 VNN1 vanin 1 2 2
MIRT493828 FRS2 fibroblast growth factor receptor substrate 2 2 6
MIRT506324 ONECUT2 one cut homeobox 2 2 2
MIRT515488 PRKCD protein kinase C delta 2 4
MIRT515543 KRT222 keratin 222 2 4
MIRT518502 DEPTOR DEP domain containing MTOR interacting protein 2 6
MIRT519278 DDX55 DEAD-box helicase 55 2 2
MIRT528638 SENP6 SUMO1/sentrin specific peptidase 6 2 2
MIRT532130 NOL11 nucleolar protein 11 2 2
MIRT558240 EDA2R ectodysplasin A2 receptor 2 2
MIRT562293 GLO1 glyoxalase I 2 2
MIRT575346 Cacul1 CDK2 associated, cullin domain 1 2 2
MIRT610250 SLC35B4 solute carrier family 35 member B4 2 2
MIRT616752 SVOP SV2 related protein 2 2
MIRT627810 PTCHD1 patched domain containing 1 2 4
MIRT643062 CCDC149 coiled-coil domain containing 149 2 2
MIRT652031 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT658708 EMB embigin 2 2
MIRT687624 LRRC40 leucine rich repeat containing 40 2 2
MIRT692723 INPP5B inositol polyphosphate-5-phosphatase B 2 2
MIRT697508 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT702301 LAMP3 lysosomal associated membrane protein 3 2 2
MIRT718288 MINA ribosomal oxygenase 2 2 2
MIRT755767 BRCC3 BRCA1/BRCA2-containing complex subunit 3 5 1
MIRT755769 BARD1 BRCA1 associated RING domain 1 5 1
MIRT755770 ATM ATM serine/threonine kinase 5 1
MIRT755771 PARP14 poly(ADP-ribose) polymerase family member 14 5 1
MIRT755775 PARP2 poly(ADP-ribose) polymerase 2 5 1
MIRT755777 PARP11 poly(ADP-ribose) polymerase family member 11 5 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4796-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4796-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4796-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)

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